RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 KIAA0100Q14667 2235 aaKnown RBP8.93□□□□□ -0.98
COL17A1-205ENST00000480127 CCL15-CCL14A0A0B4J2E2 113 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 F6X3S4 739 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 H0YGN5 161 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 GTF2A2P52657 109 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 MAP3K9P80192 1104 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 TNFAIP1Q13829 316 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 VGLL4Q14135 290 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 ARHGEF6Q15052 776 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 TAF1CQ15572 869 aaPredicted RBP8.93□□□□□ -0.98
COL17A1-205ENST00000480127 CCL15Q16663 113 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 SLC4A8Q2Y0W8 1093 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 NBPF11Q86T75 865 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.93□□□□□ -0.98
COL17A1-205ENST00000480127 TDRD7Q8NHU6 1098 aaKnown RBP8.93□□□□□ -0.98
COL17A1-205ENST00000480127 ARHGAP39Q9C0H5 1083 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 SERPINA10Q9UK55 444 aa8.93□□□□□ -0.98
COL17A1-205ENST00000480127 MKI67P46013 3256 aaKnown RBP8.92□□□□□ -0.98
COL17A1-205ENST00000480127 TCP10L2B9ZVM9 353 aa8.92□□□□□ -0.98
COL17A1-205ENST00000480127 MYCP01106 439 aaPredicted RBP8.92□□□□□ -0.98
COL17A1-205ENST00000480127 EPHA10Q5JZY3 1008 aa8.92□□□□□ -0.98
COL17A1-205ENST00000480127 MFSD14BQ5SR56 506 aa8.92□□□□□ -0.98
COL17A1-205ENST00000480127 LDHAL6AQ6ZMR3 332 aa8.92□□□□□ -0.98
COL17A1-205ENST00000480127 DZIP1LQ8IYY4 767 aaKnown RBP8.92□□□□□ -0.98
COL17A1-205ENST00000480127 SH3TC2Q8TF17 1288 aa8.92□□□□□ -0.98
COL17A1-205ENST00000480127 ZNF594Q96JF6 807 aaPredicted RBP8.92□□□□□ -0.98
COL17A1-205ENST00000480127 SRCIN1Q9C0H9 1055 aa8.92□□□□□ -0.98
COL17A1-205ENST00000480127 TMEM39BQ9GZU3 492 aa8.92□□□□□ -0.98
COL17A1-205ENST00000480127 TTF2Q9UNY4 1162 aaKnown RBP8.92□□□□□ -0.98
COL17A1-205ENST00000480127 SPDYE5A6NIY4 337 aa8.91□□□□□ -0.98
COL17A1-205ENST00000480127 TLR2O60603 784 aa8.91□□□□□ -0.98
COL17A1-205ENST00000480127 CRKP46108 304 aa8.91□□□□□ -0.98
COL17A1-205ENST00000480127 LACTBP83111 547 aaPredicted RBP8.91□□□□□ -0.98
COL17A1-205ENST00000480127 GRIK5Q16478 980 aa8.91□□□□□ -0.98
COL17A1-205ENST00000480127 LMBR1LQ6UX01 489 aa8.91□□□□□ -0.98
COL17A1-205ENST00000480127 SNCAIPQ9Y6H5 919 aa8.91□□□□□ -0.98
COL17A1-205ENST00000480127 ZSWIM8A7E2V4 1837 aa8.91□□□□□ -0.98
COL17A1-205ENST00000480127 BTBD19C9JJ37 291 aa8.9□□□□□ -0.98
COL17A1-205ENST00000480127 GRM8O00222 908 aa8.9□□□□□ -0.98
COL17A1-205ENST00000480127 VAMP4O75379 141 aa8.9□□□□□ -0.98
COL17A1-205ENST00000480127 CTGFP29279 349 aa8.9□□□□□ -0.98
COL17A1-205ENST00000480127 HIBADHP31937 336 aaKnown RBP8.9□□□□□ -0.98
COL17A1-205ENST00000480127 GYG1P46976 350 aa8.9□□□□□ -0.98
COL17A1-205ENST00000480127 UBE4AQ14139 1066 aa8.9□□□□□ -0.98
COL17A1-205ENST00000480127 BEND3Q5T5X7 828 aa8.9□□□□□ -0.98
COL17A1-205ENST00000480127 SHISA4Q96DD7 197 aa8.9□□□□□ -0.98
COL17A1-205ENST00000480127 FAM84BQ96KN1 310 aaPredicted RBP8.9□□□□□ -0.98
COL17A1-205ENST00000480127 ZCCHC17Q9NP64 241 aaKnown RBP8.9□□□□□ -0.98
COL17A1-205ENST00000480127 CSADQ9Y600 493 aa8.9□□□□□ -0.98
COL17A1-205ENST00000480127 ARAP2Q8WZ64 1704 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 IRF6O14896 467 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 GNRH1P01148 92 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 CETPP11597 493 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 TNNI2P48788 182 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 CACNB3P54284 484 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 KIF22Q14807 665 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 MTFR1Q15390 333 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 NCBP3Q53F19 620 aaKnown RBP8.89□□□□□ -0.99
COL17A1-205ENST00000480127 CHRDL2Q6WN34 429 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 ERO1BQ86YB8 467 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 ZKSCAN4Q969J2 545 aaPredicted RBP8.89□□□□□ -0.99
COL17A1-205ENST00000480127 PUS3Q9BZE2 481 aaKnown RBP8.89□□□□□ -0.99
COL17A1-205ENST00000480127 RBM27Q9P2N5 1060 aaKnown RBP8.89□□□□□ -0.99
COL17A1-205ENST00000480127 CENPFP49454 3210 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 BRCA2P51587 3418 aa8.89□□□□□ -0.99
COL17A1-205ENST00000480127 ALDH1L1O75891 902 aa8.88□□□□□ -0.99
COL17A1-205ENST00000480127 PRMT2P55345 433 aa8.88□□□□□ -0.99
COL17A1-205ENST00000480127 HDLBPQ00341 1268 aaKnown RBP8.88□□□□□ -0.99
COL17A1-205ENST00000480127 C17orf99Q6UX52 265 aa8.88□□□□□ -0.99
COL17A1-205ENST00000480127 UBE2Q1Q7Z7E8 422 aa8.88□□□□□ -0.99
COL17A1-205ENST00000480127 WRNIP1Q96S55 665 aa8.88□□□□□ -0.99
COL17A1-205ENST00000480127 PRO3102Q9H379 93 aa8.88□□□□□ -0.99
COL17A1-205ENST00000480127 SMC4Q9NTJ3 1288 aa8.88□□□□□ -0.99
COL17A1-205ENST00000480127 RIPOR2Q9Y4F9 1068 aa8.88□□□□□ -0.99
COL17A1-205ENST00000480127 ADGRA2Q96PE1 1338 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 E9PSI1 815 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 WDHD1O75717 1129 aaPredicted RBP8.87□□□□□ -0.99
COL17A1-205ENST00000480127 ECM2O94769 699 aaPredicted RBP8.87□□□□□ -0.99
COL17A1-205ENST00000480127 PSMC4P43686 418 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 CHAF1AQ13111 956 aaPredicted RBP8.87□□□□□ -0.99
COL17A1-205ENST00000480127 PPIL2Q13356 520 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 SNAPC2Q13487 334 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 CAVIN4Q5BKX8 364 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 METTL24Q5JXM2 366 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 FBXO33Q7Z6M2 555 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 FAM83AQ86UY5 434 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 DPF3Q92784 378 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 KAZALD1Q96I82 304 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 TRIM47Q96LD4 638 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 SRRDQ9UH36 339 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 CPA4Q9UI42 421 aa8.87□□□□□ -0.99
COL17A1-205ENST00000480127 IQSEC3Q9UPP2 1182 aaPredicted RBP8.87□□□□□ -0.99
COL17A1-205ENST00000480127 OSBPP22059 807 aa8.86□□□□□ -0.99
COL17A1-205ENST00000480127 GRK4P32298 578 aa8.86□□□□□ -0.99
COL17A1-205ENST00000480127 GJA8P48165 433 aa8.86□□□□□ -0.99
COL17A1-205ENST00000480127 PPATQ06203 517 aa8.86□□□□□ -0.99
COL17A1-205ENST00000480127 APOBEC3HQ6NTF7 200 aaKnown RBP8.86□□□□□ -0.99
COL17A1-205ENST00000480127 ANKRD23Q86SG2 305 aa8.86□□□□□ -0.99
COL17A1-205ENST00000480127 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.86□□□□□ -0.99
COL17A1-205ENST00000480127 TEKT1Q969V4 418 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms