RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 CCDC152Q4G0S7 254 aa15.64■□□□□ 0.09
USP11-208ENST00000480104 ANKRD18AQ8IVF6 992 aa15.64■□□□□ 0.09
USP11-208ENST00000480104 PRMT6Q96LA8 375 aaPredicted RBP15.64■□□□□ 0.09
USP11-208ENST00000480104 HSPA5P11021 654 aaKnown RBP15.63■□□□□ 0.09
USP11-208ENST00000480104 CERS5Q8N5B7 392 aa15.63■□□□□ 0.09
USP11-208ENST00000480104 NBPF3Q9H094 633 aa15.63■□□□□ 0.09
USP11-208ENST00000480104 SEMA6BQ9H3T3 888 aa15.63■□□□□ 0.09
USP11-208ENST00000480104 SNCAIPQ9Y6H5 919 aa15.63■□□□□ 0.09
USP11-208ENST00000480104 ECM29Q5VYK3 1845 aa15.63■□□□□ 0.09
USP11-208ENST00000480104 IRF6O14896 467 aa15.62■□□□□ 0.09
USP11-208ENST00000480104 FOSL2P15408 326 aa15.62■□□□□ 0.09
USP11-208ENST00000480104 KLRK1P26718 216 aa15.62■□□□□ 0.09
USP11-208ENST00000480104 CNGB1Q14028 1251 aaPredicted RBP15.62■□□□□ 0.09
USP11-208ENST00000480104 ANKLE1Q8NAG6 615 aa15.62■□□□□ 0.09
USP11-208ENST00000480104 MUC6Q6W4X9 2439 aa15.62■□□□□ 0.09
USP11-208ENST00000480104 F8W031 263 aaPredicted RBP15.61■□□□□ 0.09
USP11-208ENST00000480104 FLT3LGP49771 235 aa15.61■□□□□ 0.09
USP11-208ENST00000480104 CCT4P50991 539 aaKnown RBP15.61■□□□□ 0.09
USP11-208ENST00000480104 USP38Q8NB14 1042 aa15.61■□□□□ 0.09
USP11-208ENST00000480104 PLBD2Q8NHP8 589 aa15.61■□□□□ 0.09
USP11-208ENST00000480104 TEPSINQ96N21 525 aa15.61■□□□□ 0.09
USP11-208ENST00000480104 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.61■□□□□ 0.09
USP11-208ENST00000480104 NUDCQ9Y266 331 aa15.61■□□□□ 0.09
USP11-208ENST00000480104 PDHXO00330 501 aa15.6■□□□□ 0.09
USP11-208ENST00000480104 ERO1BQ86YB8 467 aa15.6■□□□□ 0.09
USP11-208ENST00000480104 PXYLP1Q8TE99 480 aa15.6■□□□□ 0.09
USP11-208ENST00000480104 C11orf49Q9H6J7 331 aa15.6■□□□□ 0.09
USP11-208ENST00000480104 TSPYL4Q9UJ04 414 aa15.6■□□□□ 0.09
USP11-208ENST00000480104 MINPP1Q9UNW1 487 aa15.6■□□□□ 0.09
USP11-208ENST00000480104 EIF4G2P78344 907 aaKnown RBP eCLIP15.59■□□□□ 0.09
USP11-208ENST00000480104 PPIL2Q13356 520 aa15.59■□□□□ 0.09
USP11-208ENST00000480104 TNFAIP1Q13829 316 aa15.59■□□□□ 0.09
USP11-208ENST00000480104 ANKRD23Q86SG2 305 aa15.59■□□□□ 0.09
USP11-208ENST00000480104 ZBTB38Q8NAP3 1195 aaPredicted RBP15.59■□□□□ 0.09
USP11-208ENST00000480104 CFAP53Q96M91 514 aa15.59■□□□□ 0.09
USP11-208ENST00000480104 TTYH1Q9H313 450 aaPredicted RBP15.59■□□□□ 0.09
USP11-208ENST00000480104 PER1O15534 1290 aaPredicted RBP15.58■□□□□ 0.08
USP11-208ENST00000480104 BCRP11274 1271 aa15.58■□□□□ 0.08
USP11-208ENST00000480104 TMEM39BQ9GZU3 492 aa15.58■□□□□ 0.08
USP11-208ENST00000480104 DDX60LQ5H9U9 1706 aaKnown RBP15.57■□□□□ 0.08
USP11-208ENST00000480104 HSP90B1P14625 803 aaKnown RBP15.57■□□□□ 0.08
USP11-208ENST00000480104 TRIM28Q13263 835 aaKnown RBP15.57■□□□□ 0.08
USP11-208ENST00000480104 SPDYE2Q495Y8 402 aa15.57■□□□□ 0.08
USP11-208ENST00000480104 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.57■□□□□ 0.08
USP11-208ENST00000480104 TAOK2Q9UL54 1235 aa15.57■□□□□ 0.08
USP11-208ENST00000480104 PFASO15067 1338 aa15.57■□□□□ 0.08
USP11-208ENST00000480104 RBM5P52756 815 aaKnown RBP eCLIP15.56■□□□□ 0.08
USP11-208ENST00000480104 IRF5Q13568 498 aa15.56■□□□□ 0.08
USP11-208ENST00000480104 ZKSCAN4Q969J2 545 aaPredicted RBP15.56■□□□□ 0.08
USP11-208ENST00000480104 WRNIP1Q96S55 665 aa15.56■□□□□ 0.08
USP11-208ENST00000480104 CHPF2Q9P2E5 772 aa15.56■□□□□ 0.08
USP11-208ENST00000480104 ZNF70Q9UC06 446 aaPredicted RBP15.56■□□□□ 0.08
USP11-208ENST00000480104 ARIH1Q9Y4X5 557 aaPredicted RBP15.56■□□□□ 0.08
USP11-208ENST00000480104 PDE8AO60658 829 aa15.55■□□□□ 0.08
USP11-208ENST00000480104 ADAMTS19Q8TE59 1207 aa15.55■□□□□ 0.08
USP11-208ENST00000480104 JARID2Q92833 1246 aaPredicted RBP15.55■□□□□ 0.08
USP11-208ENST00000480104 CDC5LQ99459 802 aaKnown RBP15.55■□□□□ 0.08
USP11-208ENST00000480104 PARK7Q99497 189 aaKnown RBP15.55■□□□□ 0.08
USP11-208ENST00000480104 BSDC1Q9NW68 430 aaPredicted RBP15.55■□□□□ 0.08
USP11-208ENST00000480104 TCP10L2B9ZVM9 353 aa15.54■□□□□ 0.08
USP11-208ENST00000480104 CD209Q9NNX6 404 aa15.54■□□□□ 0.08
USP11-208ENST00000480104 LEMD3Q9Y2U8 911 aa15.54■□□□□ 0.08
USP11-208ENST00000480104 HCN4Q9Y3Q4 1203 aa15.54■□□□□ 0.08
USP11-208ENST00000480104 DLG5Q8TDM6 1919 aa15.54■□□□□ 0.08
USP11-208ENST00000480104 CYP2C8P10632 490 aa15.53■□□□□ 0.08
USP11-208ENST00000480104 MOGSQ13724 837 aa15.53■□□□□ 0.08
USP11-208ENST00000480104 UHRF1Q96T88 793 aaPredicted RBP15.53■□□□□ 0.08
USP11-208ENST00000480104 TDRD3Q9H7E2 651 aaKnown RBP15.53■□□□□ 0.08
USP11-208ENST00000480104 XIRP2A4UGR9 3374 aa15.53■□□□□ 0.08
USP11-208ENST00000480104 MGAMO43451 1857 aa15.52■□□□□ 0.08
USP11-208ENST00000480104 ARAP2Q8WZ64 1704 aa15.52■□□□□ 0.08
USP11-208ENST00000480104 TNPO2O14787 897 aaKnown RBP15.52■□□□□ 0.08
USP11-208ENST00000480104 LRRC26Q2I0M4 334 aa15.52■□□□□ 0.08
USP11-208ENST00000480104 LBHD1Q9BQE6 289 aaPredicted RBP15.52■□□□□ 0.08
USP11-208ENST00000480104 JAG2Q9Y219 1238 aa15.52■□□□□ 0.08
USP11-208ENST00000480104 PCCAP05165 728 aaPredicted RBP15.51■□□□□ 0.07
USP11-208ENST00000480104 PPATQ06203 517 aa15.51■□□□□ 0.07
USP11-208ENST00000480104 ALYREFQ86V81 257 aaKnown RBP15.51■□□□□ 0.07
USP11-208ENST00000480104 C1QTNF1Q9BXJ1 281 aa15.51■□□□□ 0.07
USP11-208ENST00000480104 OGDHLQ9ULD0 1010 aa15.51■□□□□ 0.07
USP11-208ENST00000480104 SPEF2Q9C093 1822 aa15.5■□□□□ 0.07
USP11-208ENST00000480104 CTSWP56202 376 aa15.5■□□□□ 0.07
USP11-208ENST00000480104 NFE2L2Q16236 605 aa15.5■□□□□ 0.07
USP11-208ENST00000480104 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
USP11-208ENST00000480104 GREM2Q9H772 168 aa15.5■□□□□ 0.07
USP11-208ENST00000480104 KCNH4Q9UQ05 1017 aa15.5■□□□□ 0.07
USP11-208ENST00000480104 HMGCRP04035 888 aa15.49■□□□□ 0.07
USP11-208ENST00000480104 COL6A1P12109 1028 aa15.49■□□□□ 0.07
USP11-208ENST00000480104 TRIM32Q13049 653 aa15.49■□□□□ 0.07
USP11-208ENST00000480104 ASB2Q96Q27 587 aa15.49■□□□□ 0.07
USP11-208ENST00000480104 TNNI2P48788 182 aa15.48■□□□□ 0.07
USP11-208ENST00000480104 FKBP1AP62942 108 aaKnown RBP15.48■□□□□ 0.07
USP11-208ENST00000480104 SMAD3P84022 425 aaKnown RBP15.48■□□□□ 0.07
USP11-208ENST00000480104 SHHQ15465 462 aa15.48■□□□□ 0.07
USP11-208ENST00000480104 C9orf50Q5SZB4 431 aa15.48■□□□□ 0.07
USP11-208ENST00000480104 GPAT2Q6NUI2 795 aa15.48■□□□□ 0.07
USP11-208ENST00000480104 ATXN2LQ8WWM7 1075 aaKnown RBP15.48■□□□□ 0.07
USP11-208ENST00000480104 HMX1Q9NP08 348 aaPredicted RBP15.48■□□□□ 0.07
USP11-208ENST00000480104 NEFMP07197 916 aa15.47■□□□□ 0.07
USP11-208ENST00000480104 KCNJ4P48050 445 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms