RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 ZBTB48P10074 688 aaPredicted RBP13.21□□□□□ -0.29
SMURF1-204ENST00000480055 INHBEP58166 350 aa13.21□□□□□ -0.29
SMURF1-204ENST00000480055 MAP3K11Q16584 847 aa13.21□□□□□ -0.29
SMURF1-204ENST00000480055 TTLL5Q6EMB2 1281 aa13.21□□□□□ -0.29
SMURF1-204ENST00000480055 UBE3BQ7Z3V4 1068 aa13.21□□□□□ -0.29
SMURF1-204ENST00000480055 TXNRD3Q86VQ6 643 aa13.21□□□□□ -0.29
SMURF1-204ENST00000480055 TSR2Q969E8 191 aaKnown RBP13.21□□□□□ -0.29
SMURF1-204ENST00000480055 MPHOSPH8Q99549 860 aa13.21□□□□□ -0.29
SMURF1-204ENST00000480055 LEMD3Q9Y2U8 911 aa13.21□□□□□ -0.29
SMURF1-204ENST00000480055 CEP290O15078 2479 aa13.21□□□□□ -0.29
SMURF1-204ENST00000480055 IGF2BP3O00425 579 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMURF1-204ENST00000480055 KIAA0825Q8IV33 1275 aa13.2□□□□□ -0.3
SMURF1-204ENST00000480055 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
SMURF1-204ENST00000480055 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
SMURF1-204ENST00000480055 FZD1Q9UP38 647 aa13.2□□□□□ -0.3
SMURF1-204ENST00000480055 ZNF804BA4D1E1 1349 aa13.19□□□□□ -0.3
SMURF1-204ENST00000480055 NEURL1BA8MQ27 555 aa13.19□□□□□ -0.3
SMURF1-204ENST00000480055 ITGA6P23229 1130 aa13.19□□□□□ -0.3
SMURF1-204ENST00000480055 KLRK1P26718 216 aa13.19□□□□□ -0.3
SMURF1-204ENST00000480055 GTF2IP78347 998 aa13.19□□□□□ -0.3
SMURF1-204ENST00000480055 PTPN22Q9Y2R2 807 aa13.19□□□□□ -0.3
SMURF1-204ENST00000480055 UNCXA6NJT0 531 aa13.18□□□□□ -0.3
SMURF1-204ENST00000480055 TWISTNBQ3B726 338 aaPredicted RBP13.18□□□□□ -0.3
SMURF1-204ENST00000480055 TMC2Q8TDI7 906 aa13.18□□□□□ -0.3
SMURF1-204ENST00000480055 ARMC5Q96C12 935 aa13.18□□□□□ -0.3
SMURF1-204ENST00000480055 SLC10A4Q96EP9 437 aa13.18□□□□□ -0.3
SMURF1-204ENST00000480055 ERO1AQ96HE7 468 aa13.18□□□□□ -0.3
SMURF1-204ENST00000480055 CLMNQ96JQ2 1002 aa13.18□□□□□ -0.3
SMURF1-204ENST00000480055 DEFB129Q9H1M3 183 aa13.18□□□□□ -0.3
SMURF1-204ENST00000480055 PPP2R3BQ9Y5P8 575 aa13.18□□□□□ -0.3
SMURF1-204ENST00000480055 TRIOBPQ9H2D6 2365 aa13.17□□□□□ -0.3
SMURF1-204ENST00000480055 H7C1W4 665 aa13.17□□□□□ -0.3
SMURF1-204ENST00000480055 PDE4AP27815 886 aa13.17□□□□□ -0.3
SMURF1-204ENST00000480055 FXR1P51114 621 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMURF1-204ENST00000480055 G2E3Q7L622 706 aa13.17□□□□□ -0.3
SMURF1-204ENST00000480055 MTMR14Q8NCE2 650 aa13.17□□□□□ -0.3
SMURF1-204ENST00000480055 MYH16Q9H6N6 1097 aa13.17□□□□□ -0.3
SMURF1-204ENST00000480055 IRS2Q9Y4H2 1338 aa13.16□□□□□ -0.3
SMURF1-204ENST00000480055 ANKRD18BA2A2Z9 1011 aa13.16□□□□□ -0.3
SMURF1-204ENST00000480055 F8W031 263 aaPredicted RBP13.16□□□□□ -0.3
SMURF1-204ENST00000480055 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
SMURF1-204ENST00000480055 CHRNDQ07001 517 aa13.16□□□□□ -0.3
SMURF1-204ENST00000480055 CRHR2Q13324 411 aa13.16□□□□□ -0.3
SMURF1-204ENST00000480055 FKBP5Q13451 457 aaPredicted RBP13.16□□□□□ -0.3
SMURF1-204ENST00000480055 GCKRQ14397 625 aa13.16□□□□□ -0.3
SMURF1-204ENST00000480055 DLGAP5Q15398 846 aa13.16□□□□□ -0.3
SMURF1-204ENST00000480055 CERS5Q8N5B7 392 aa13.16□□□□□ -0.3
SMURF1-204ENST00000480055 CD99L2Q8TCZ2 262 aa13.16□□□□□ -0.3
SMURF1-204ENST00000480055 CHMP3Q9Y3E7 222 aa13.16□□□□□ -0.3
SMURF1-204ENST00000480055 MYH13Q9UKX3 1938 aa13.15□□□□□ -0.3
SMURF1-204ENST00000480055 MYO1BO43795 1136 aa13.15□□□□□ -0.3
SMURF1-204ENST00000480055 TAF5LO75529 589 aa13.15□□□□□ -0.3
SMURF1-204ENST00000480055 GJA5P36382 358 aa13.15□□□□□ -0.3
SMURF1-204ENST00000480055 PLA2G12BQ9BX93 195 aa13.15□□□□□ -0.3
SMURF1-204ENST00000480055 CD209Q9NNX6 404 aa13.15□□□□□ -0.3
SMURF1-204ENST00000480055 TESPA1A2RU30 521 aaPredicted RBP13.14□□□□□ -0.31
SMURF1-204ENST00000480055 EN2P19622 333 aaPredicted RBP13.14□□□□□ -0.31
SMURF1-204ENST00000480055 RBM5P52756 815 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMURF1-204ENST00000480055 CAP1Q01518 475 aa13.14□□□□□ -0.31
SMURF1-204ENST00000480055 FLIIQ13045 1269 aa13.14□□□□□ -0.31
SMURF1-204ENST00000480055 OTUD7BQ6GQQ9 843 aa13.14□□□□□ -0.31
SMURF1-204ENST00000480055 HELBQ8NG08 1087 aaPredicted RBP13.14□□□□□ -0.31
SMURF1-204ENST00000480055 DNAAF4Q8WXU2 420 aa13.14□□□□□ -0.31
SMURF1-204ENST00000480055 EFCC1Q9HA90 598 aa13.14□□□□□ -0.31
SMURF1-204ENST00000480055 PCDHAC2Q9Y5I4 1007 aa13.14□□□□□ -0.31
SMURF1-204ENST00000480055 MGAMO43451 1857 aa13.14□□□□□ -0.31
SMURF1-204ENST00000480055 CSF1RP07333 972 aa13.13□□□□□ -0.31
SMURF1-204ENST00000480055 IREB2P48200 963 aaKnown RBP13.13□□□□□ -0.31
SMURF1-204ENST00000480055 SP3Q02447 781 aa13.13□□□□□ -0.31
SMURF1-204ENST00000480055 IFIT5Q13325 482 aaKnown RBP13.13□□□□□ -0.31
SMURF1-204ENST00000480055 SUPT20HL1Q3ZLR7 823 aa13.13□□□□□ -0.31
SMURF1-204ENST00000480055 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
SMURF1-204ENST00000480055 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
SMURF1-204ENST00000480055 WWC1Q8IX03 1113 aa13.13□□□□□ -0.31
SMURF1-204ENST00000480055 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
SMURF1-204ENST00000480055 LINS1Q8NG48 757 aa13.13□□□□□ -0.31
SMURF1-204ENST00000480055 ZNF333Q96JL9 665 aa13.13□□□□□ -0.31
SMURF1-204ENST00000480055 PTPN18Q99952 460 aa13.13□□□□□ -0.31
SMURF1-204ENST00000480055 VEZTQ9HBM0 779 aa13.13□□□□□ -0.31
SMURF1-204ENST00000480055 AOX1Q06278 1338 aa13.13□□□□□ -0.31
SMURF1-204ENST00000480055 CLRN2A0PK11 232 aa13.12□□□□□ -0.31
SMURF1-204ENST00000480055 SNAP23O00161 211 aa13.12□□□□□ -0.31
SMURF1-204ENST00000480055 PLIN1O60240 522 aa13.12□□□□□ -0.31
SMURF1-204ENST00000480055 USP2O75604 605 aaPredicted RBP13.12□□□□□ -0.31
SMURF1-204ENST00000480055 CASP7P55210 303 aa13.12□□□□□ -0.31
SMURF1-204ENST00000480055 FKBP1AP62942 108 aaKnown RBP13.12□□□□□ -0.31
SMURF1-204ENST00000480055 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
SMURF1-204ENST00000480055 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
SMURF1-204ENST00000480055 NBPF12Q5TAG4 269 aaPredicted RBP13.12□□□□□ -0.31
SMURF1-204ENST00000480055 ANKRD13AQ8IZ07 590 aa13.12□□□□□ -0.31
SMURF1-204ENST00000480055 WDR70Q9NW82 654 aa13.12□□□□□ -0.31
SMURF1-204ENST00000480055 JAG2Q9Y219 1238 aa13.12□□□□□ -0.31
SMURF1-204ENST00000480055 IL1R1P14778 569 aa13.11□□□□□ -0.31
SMURF1-204ENST00000480055 CCDC27Q2M243 656 aa13.11□□□□□ -0.31
SMURF1-204ENST00000480055 PRMT6Q96LA8 375 aaPredicted RBP13.11□□□□□ -0.31
SMURF1-204ENST00000480055 LARP6Q9BRS8 491 aaKnown RBP13.11□□□□□ -0.31
SMURF1-204ENST00000480055 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
SMURF1-204ENST00000480055 RASA3Q14644 834 aa13.1□□□□□ -0.31
SMURF1-204ENST00000480055 CCDC57Q2TAC2 916 aa13.1□□□□□ -0.31
SMURF1-204ENST00000480055 OPTNQ96CV9 577 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms