RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 OSBPL3Q9H4L5 887 aa11.75□□□□□ -0.53
CD46-214ENST00000480003 KCNQ5Q9NR82 932 aa11.75□□□□□ -0.53
CD46-214ENST00000480003 CACNA1SQ13698 1873 aa11.74□□□□□ -0.53
CD46-214ENST00000480003 PPP1R37O75864 691 aa11.74□□□□□ -0.53
CD46-214ENST00000480003 UQCRFS1P1P0C7P4 283 aa11.74□□□□□ -0.53
CD46-214ENST00000480003 PDE1AP54750 535 aa11.74□□□□□ -0.53
CD46-214ENST00000480003 ZNF804AQ7Z570 1209 aa11.74□□□□□ -0.53
CD46-214ENST00000480003 DBNDD1Q9H9R9 158 aa11.74□□□□□ -0.53
CD46-214ENST00000480003 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
CD46-214ENST00000480003 ECE2O60344 883 aa11.73□□□□□ -0.53
CD46-214ENST00000480003 MCAMP43121 646 aa11.73□□□□□ -0.53
CD46-214ENST00000480003 GORABQ5T7V8 394 aa11.73□□□□□ -0.53
CD46-214ENST00000480003 C9orf131Q5VYM1 1079 aa11.73□□□□□ -0.53
CD46-214ENST00000480003 TTC41PQ6P2S7 1318 aa11.73□□□□□ -0.53
CD46-214ENST00000480003 VPS37DQ86XT2 251 aa11.73□□□□□ -0.53
CD46-214ENST00000480003 PI4K2BQ8TCG2 481 aa11.73□□□□□ -0.53
CD46-214ENST00000480003 JDP2Q8WYK2 163 aa11.73□□□□□ -0.53
CD46-214ENST00000480003 ECHDC1Q9NTX5 307 aa11.73□□□□□ -0.53
CD46-214ENST00000480003 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
CD46-214ENST00000480003 ZNRF3Q9ULT6 936 aa11.73□□□□□ -0.53
CD46-214ENST00000480003 FAM205AQ6ZU69 1335 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 SEMA3EO15041 775 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 VIL1P09327 827 aaKnown RBP11.72□□□□□ -0.53
CD46-214ENST00000480003 HOXB1P14653 301 aaPredicted RBP11.72□□□□□ -0.53
CD46-214ENST00000480003 MX1P20591 662 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 CXCL9Q07325 125 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 SCARF1Q14162 830 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 TTC39AQ5SRH9 613 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 TTLL5Q6EMB2 1281 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 NIM1KQ8IY84 436 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 BCL11AQ9H165 835 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 HMG20BQ9P0W2 317 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 A0A1B0GUL6 1792 aa11.72□□□□□ -0.53
CD46-214ENST00000480003 COL4A5P29400 1685 aa11.71□□□□□ -0.53
CD46-214ENST00000480003 PDS5AQ29RF7 1337 aaKnown RBP11.71□□□□□ -0.53
CD46-214ENST00000480003 RASGRF1Q13972 1273 aa11.71□□□□□ -0.53
CD46-214ENST00000480003 STRIP1Q5VSL9 837 aa11.71□□□□□ -0.53
CD46-214ENST00000480003 HAUS7Q99871 368 aa11.71□□□□□ -0.53
CD46-214ENST00000480003 BOLA2Q9H3K6 86 aa11.71□□□□□ -0.53
CD46-214ENST00000480003 RNF181Q9P0P0 153 aa11.71□□□□□ -0.53
CD46-214ENST00000480003 IQSEC3Q9UPP2 1182 aaPredicted RBP11.71□□□□□ -0.53
CD46-214ENST00000480003 AOX1Q06278 1338 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 POTEB3A0JP26 581 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 USP17L3A6NCW0 530 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 USP17L4A6NCW7 530 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 KIF3CO14782 793 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 ERC2O15083 957 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 GLRX3O76003 335 aaKnown RBP11.7□□□□□ -0.54
CD46-214ENST00000480003 CYP2E1P05181 493 aaPredicted RBP11.7□□□□□ -0.54
CD46-214ENST00000480003 ZAP70P43403 619 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 FKBP1AP62942 108 aaKnown RBP11.7□□□□□ -0.54
CD46-214ENST00000480003 GTF2IP78347 998 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 TSHZ3Q63HK5 1081 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 POTEBQ6S5H4 581 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 USP17L1Q7RTZ2 530 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 SKAP1Q86WV1 359 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 SPATA5Q8NB90 893 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 HS3ST6Q96QI5 342 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 GMLQ99445 158 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 SBF1O95248 1867 aa11.7□□□□□ -0.54
CD46-214ENST00000480003 SALL1Q9NSC2 1324 aa11.69□□□□□ -0.54
CD46-214ENST00000480003 GOLGB1Q14789 3259 aaKnown RBP11.69□□□□□ -0.54
CD46-214ENST00000480003 CHD4Q14839 1912 aa11.69□□□□□ -0.54
CD46-214ENST00000480003 C2orf72A6NCS6 295 aa11.69□□□□□ -0.54
CD46-214ENST00000480003 PSMD14O00487 310 aa11.69□□□□□ -0.54
CD46-214ENST00000480003 EIF6P56537 245 aaKnown RBP11.69□□□□□ -0.54
CD46-214ENST00000480003 DACT2Q5SW24 774 aa11.69□□□□□ -0.54
CD46-214ENST00000480003 CIAPIN1Q6FI81 312 aa11.69□□□□□ -0.54
CD46-214ENST00000480003 PI16Q6UXB8 463 aa11.69□□□□□ -0.54
CD46-214ENST00000480003 WDR66Q8TBY9 1149 aa11.69□□□□□ -0.54
CD46-214ENST00000480003 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
CD46-214ENST00000480003 FRAT2O75474 233 aaPredicted RBP11.68□□□□□ -0.54
CD46-214ENST00000480003 RAD17O75943 681 aa11.68□□□□□ -0.54
CD46-214ENST00000480003 TNIP1Q15025 636 aa11.68□□□□□ -0.54
CD46-214ENST00000480003 CERS5Q8N5B7 392 aa11.68□□□□□ -0.54
CD46-214ENST00000480003 TBC1D22AQ8WUA7 517 aa11.68□□□□□ -0.54
CD46-214ENST00000480003 GPATCH3Q96I76 525 aa11.68□□□□□ -0.54
CD46-214ENST00000480003 MRIQ9BWK5 157 aa11.68□□□□□ -0.54
CD46-214ENST00000480003 ANTXR1Q9H6X2 564 aa11.68□□□□□ -0.54
CD46-214ENST00000480003 NDUFB9Q9Y6M9 179 aa11.68□□□□□ -0.54
CD46-214ENST00000480003 ZC3H4Q9UPT8 1303 aaKnown RBP11.67□□□□□ -0.54
CD46-214ENST00000480003 IGSF3O75054 1194 aa11.67□□□□□ -0.54
CD46-214ENST00000480003 CHAF1AQ13111 956 aaPredicted RBP11.67□□□□□ -0.54
CD46-214ENST00000480003 GRIK5Q16478 980 aa11.67□□□□□ -0.54
CD46-214ENST00000480003 RSBN1LQ6PCB5 846 aaPredicted RBP11.67□□□□□ -0.54
CD46-214ENST00000480003 TBC1D9Q6ZT07 1266 aa11.67□□□□□ -0.54
CD46-214ENST00000480003 AGBL3Q8NEM8 1001 aa11.67□□□□□ -0.54
CD46-214ENST00000480003 DPF2Q92785 391 aa11.67□□□□□ -0.54
CD46-214ENST00000480003 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
CD46-214ENST00000480003 MXD3Q9BW11 206 aa11.67□□□□□ -0.54
CD46-214ENST00000480003 GPBP1L1Q9HC44 474 aaPredicted RBP11.67□□□□□ -0.54
CD46-214ENST00000480003 PIH1D3Q9NQM4 214 aaKnown RBP11.67□□□□□ -0.54
CD46-214ENST00000480003 JAG2Q9Y219 1238 aa11.67□□□□□ -0.54
CD46-214ENST00000480003 SUGT1Q9Y2Z0 365 aa11.67□□□□□ -0.54
CD46-214ENST00000480003 COL1A1P02452 1464 aaPredicted RBP11.67□□□□□ -0.54
CD46-214ENST00000480003 ZNF541Q9H0D2 1346 aa11.66□□□□□ -0.54
CD46-214ENST00000480003 CCDC88AQ3V6T2 1871 aa11.66□□□□□ -0.54
CD46-214ENST00000480003 GLTPD2A6NH11 291 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms