RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 DZIP3Q86Y13 1208 aaKnown RBP10.05□□□□□ -0.8
TTC3-216ENST00000479930 MAP3K13O43283 966 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 YARSP54577 528 aaKnown RBP10.05□□□□□ -0.8
TTC3-216ENST00000479930 ANKRD1Q15327 319 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 LCA5Q86VQ0 697 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 NSFL1CQ9UNZ2 370 aaKnown RBP10.05□□□□□ -0.8
TTC3-216ENST00000479930 ESRRBO95718 433 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 KIF11P52732 1056 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 PPP2R5AQ15172 486 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 ZSCAN18Q8TBC5 510 aaPredicted RBP10.05□□□□□ -0.8
TTC3-216ENST00000479930 ABHD8Q96I13 439 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 GPCPD1Q9NPB8 672 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 NPR1P16066 1061 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 SSTR3P32745 418 aaPredicted RBP10.05□□□□□ -0.8
TTC3-216ENST00000479930 SYNJ2BP-COX16A0A087WUM0 186 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 MYSM1Q5VVJ2 828 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 NEK1Q96PY6 1258 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 PHAXQ9H814 394 aaKnown RBP10.05□□□□□ -0.8
TTC3-216ENST00000479930 EXOC1Q9NV70 894 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 COX16Q9P0S2 106 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 ANAPC5Q9UJX4 755 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 SLC12A1Q13621 1099 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 COG4Q9H9E3 785 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 MLXIPQ9HAP2 919 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 TSHZ2Q9NRE2 1034 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 ZNF263O14978 683 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 RABGAP1Q9Y3P9 1069 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 CCDC110Q8TBZ0 833 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 PANK3Q9H999 370 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 DHX57Q6P158 1386 aaKnown RBP10.04□□□□□ -0.8
TTC3-216ENST00000479930 CCDC38Q502W7 563 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 SH2D4BQ5SQS7 431 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 ZNF830Q96NB3 372 aaPredicted RBP10.04□□□□□ -0.8
TTC3-216ENST00000479930 ZBTB3Q9H5J0 574 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 KRT10P13645 584 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 ALDH3A1P30838 453 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 FAM107BQ9H098 131 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.04□□□□□ -0.8
TTC3-216ENST00000479930 ERCC6LQ2NKX8 1250 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 PGBD1Q96JS3 809 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 CCDC196A0A1B0GTZ2 297 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 LZICQ8WZA0 190 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 EXOC4Q96A65 974 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 SH2D4AQ9H788 454 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 CACNA2D2Q9NY47 1150 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 NBPF26B4DH59 902 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 ZNF213O14771 459 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 PDCP20941 246 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 CPXCR1Q8N123 301 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 BTN2A2Q8WVV5 523 aa10.04□□□□□ -0.8
TTC3-216ENST00000479930 GOLIM4O00461 696 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 MPNDQ8N594 471 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 NAA15Q9BXJ9 866 aaKnown RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 LRRC27Q9C0I9 530 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 MICALCLQ6ZW33 695 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 WDR66Q8TBY9 1149 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 MAIP1Q8WWC4 291 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 RNF41Q9H4P4 317 aaPredicted RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.03□□□□□ -0.8
TTC3-216ENST00000479930 NVLO15381 856 aaKnown RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 SNUPNO95149 360 aaKnown RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 CENPSQ8N2Z9 138 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 NLRP3Q96P20 1036 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 C1orf115Q9H7X2 142 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 TRIM35Q9UPQ4 493 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 LMTK3Q96Q04 1460 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 CCDC66A2RUB6 948 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 PFDN6O15212 129 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 BRD3Q15059 726 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 CTR9Q6PD62 1173 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 TRIML1Q8N9V2 468 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 UPF3BQ9BZI7 483 aaKnown RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 SUCLA2Q9P2R7 463 aaPredicted RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 STMN1P16949 149 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 ZSCAN20P17040 1043 aaPredicted RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 PPP4R3BQ5MIZ7 849 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 CWC27Q6UX04 472 aaKnown RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 ZC3H15Q8WU90 426 aaKnown RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 L3MBTL3Q96JM7 780 aaPredicted RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 CASQ2O14958 399 aaPredicted RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 KRT3P12035 628 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 CALML3P27482 149 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 TRAPPC10P48553 1259 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 CKAP4Q07065 602 aaKnown RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 PUM3Q15397 648 aaKnown RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 GLG1Q92896 1179 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 PPP6R1Q9UPN7 881 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 DDX27Q96GQ7 796 aaKnown RBP10.03□□□□□ -0.8
TTC3-216ENST00000479930 GBP3Q9H0R5 595 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 CCDC68Q9H2F9 335 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 BAG5Q9UL15 447 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 UACAQ9BZF9 1416 aa10.03□□□□□ -0.8
TTC3-216ENST00000479930 PPP1R7Q15435 360 aa10.02□□□□□ -0.8
TTC3-216ENST00000479930 SELENOSQ9BQE4 189 aa10.02□□□□□ -0.8
TTC3-216ENST00000479930 ZNF277Q9NRM2 450 aaPredicted RBP10.02□□□□□ -0.8
TTC3-216ENST00000479930 CCDC122Q5T0U0 273 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 SCYL2Q6P3W7 929 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 RASAL2Q9UJF2 1139 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 HIF1AQ16665 826 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 LARP1BQ659C4 914 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms