RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 R3HDMLQ9H3Y0 253 aa21.74■■□□□ 1.07
ECHDC1-216ENST00000479525 IFIT1P09914 478 aaKnown RBP21.73■■□□□ 1.07
ECHDC1-216ENST00000479525 FRAT1Q92837 279 aaPredicted RBP21.73■■□□□ 1.07
ECHDC1-216ENST00000479525 TMEM39BQ9GZU3 492 aa21.73■■□□□ 1.07
ECHDC1-216ENST00000479525 SLC5A1P13866 664 aa21.72■■□□□ 1.07
ECHDC1-216ENST00000479525 SPRYD7Q5W111 196 aa21.72■■□□□ 1.07
ECHDC1-216ENST00000479525 CLUAP1Q96AJ1 413 aa21.72■■□□□ 1.07
ECHDC1-216ENST00000479525 SERPINA10Q9UK55 444 aa21.72■■□□□ 1.07
ECHDC1-216ENST00000479525 USP2O75604 605 aaPredicted RBP21.71■■□□□ 1.07
ECHDC1-216ENST00000479525 CT47B1P0C2W7 299 aaPredicted RBP21.71■■□□□ 1.07
ECHDC1-216ENST00000479525 GJA5P36382 358 aa21.71■■□□□ 1.07
ECHDC1-216ENST00000479525 SLC10A4Q96EP9 437 aa21.71■■□□□ 1.07
ECHDC1-216ENST00000479525 LAMB1P07942 1786 aa21.71■■□□□ 1.07
ECHDC1-216ENST00000479525 PPP1R12BO60237 982 aaPredicted RBP21.7■■□□□ 1.06
ECHDC1-216ENST00000479525 ADORA1P30542 326 aa21.7■■□□□ 1.06
ECHDC1-216ENST00000479525 WNK4Q96J92 1243 aa21.7■■□□□ 1.06
ECHDC1-216ENST00000479525 PPP2R3BQ9Y5P8 575 aa21.7■■□□□ 1.06
ECHDC1-216ENST00000479525 MYH2Q9UKX2 1941 aa21.69■■□□□ 1.06
ECHDC1-216ENST00000479525 HNRNPUQ00839 825 aaKnown RBP eCLIP21.69■■□□□ 1.06
ECHDC1-216ENST00000479525 ATP2B3Q16720 1220 aa21.69■■□□□ 1.06
ECHDC1-216ENST00000479525 CNKSR2Q8WXI2 1034 aa21.69■■□□□ 1.06
ECHDC1-216ENST00000479525 LPIN2Q92539 896 aa21.69■■□□□ 1.06
ECHDC1-216ENST00000479525 TEPSINQ96N21 525 aa21.69■■□□□ 1.06
ECHDC1-216ENST00000479525 ELP3Q9H9T3 547 aa21.69■■□□□ 1.06
ECHDC1-216ENST00000479525 TM4SF4P48230 202 aa21.68■■□□□ 1.06
ECHDC1-216ENST00000479525 SUPT20HL1Q3ZLR7 823 aa21.68■■□□□ 1.06
ECHDC1-216ENST00000479525 ZNF296Q8WUU4 475 aaPredicted RBP21.68■■□□□ 1.06
ECHDC1-216ENST00000479525 TEKT1Q969V4 418 aa21.68■■□□□ 1.06
ECHDC1-216ENST00000479525 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.68■■□□□ 1.06
ECHDC1-216ENST00000479525 KIF16BQ96L93 1317 aa21.67■■□□□ 1.06
ECHDC1-216ENST00000479525 TRIM27P14373 513 aa21.67■■□□□ 1.06
ECHDC1-216ENST00000479525 PHKA1P46020 1223 aa21.67■■□□□ 1.06
ECHDC1-216ENST00000479525 MAP3K11Q16584 847 aa21.67■■□□□ 1.06
ECHDC1-216ENST00000479525 TBC1D22AQ8WUA7 517 aa21.67■■□□□ 1.06
ECHDC1-216ENST00000479525 CEP126Q9P2H0 1117 aa21.67■■□□□ 1.06
ECHDC1-216ENST00000479525 PRDX5P30044 214 aa21.66■■□□□ 1.06
ECHDC1-216ENST00000479525 IREB2P48200 963 aaKnown RBP21.66■■□□□ 1.06
ECHDC1-216ENST00000479525 DIXDC1Q155Q3 683 aa21.66■■□□□ 1.06
ECHDC1-216ENST00000479525 DIEXFQ68CQ4 756 aaKnown RBP21.66■■□□□ 1.06
ECHDC1-216ENST00000479525 IGF2BP3O00425 579 aaKnown RBP eCLIP21.65■■□□□ 1.06
ECHDC1-216ENST00000479525 SREBF2Q12772 1141 aa21.65■■□□□ 1.06
ECHDC1-216ENST00000479525 TNFAIP1Q13829 316 aa21.65■■□□□ 1.06
ECHDC1-216ENST00000479525 INTS3Q68E01 1043 aaKnown RBP21.65■■□□□ 1.06
ECHDC1-216ENST00000479525 REM2Q8IYK8 340 aaPredicted RBP21.65■■□□□ 1.06
ECHDC1-216ENST00000479525 SOX10P56693 466 aa21.64■■□□□ 1.06
ECHDC1-216ENST00000479525 TIMM10P62072 90 aa21.64■■□□□ 1.06
ECHDC1-216ENST00000479525 APOBEC3HQ6NTF7 200 aaKnown RBP21.64■■□□□ 1.06
ECHDC1-216ENST00000479525 GPR25O00155 361 aa21.63■■□□□ 1.05
ECHDC1-216ENST00000479525 SRGAP3O43295 1099 aa21.63■■□□□ 1.05
ECHDC1-216ENST00000479525 CIAO1O76071 339 aa21.63■■□□□ 1.05
ECHDC1-216ENST00000479525 CTU1Q7Z7A3 348 aaKnown RBP21.63■■□□□ 1.05
ECHDC1-216ENST00000479525 IL15P40933 162 aaPredicted RBP21.62■■□□□ 1.05
ECHDC1-216ENST00000479525 TNNI2P48788 182 aa21.62■■□□□ 1.05
ECHDC1-216ENST00000479525 TFCP2Q12800 502 aa21.62■■□□□ 1.05
ECHDC1-216ENST00000479525 ATF7IPQ6VMQ6 1270 aa21.62■■□□□ 1.05
ECHDC1-216ENST00000479525 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.62■■□□□ 1.05
ECHDC1-216ENST00000479525 IFNL1Q8IU54 200 aa21.62■■□□□ 1.05
ECHDC1-216ENST00000479525 ANKRD13AQ8IZ07 590 aa21.62■■□□□ 1.05
ECHDC1-216ENST00000479525 OPTNQ96CV9 577 aa21.62■■□□□ 1.05
ECHDC1-216ENST00000479525 ZDHHC15Q96MV8 337 aa21.62■■□□□ 1.05
ECHDC1-216ENST00000479525 ZSWIM8A7E2V4 1837 aa21.62■■□□□ 1.05
ECHDC1-216ENST00000479525 TCP10Q12799 353 aa21.61■■□□□ 1.05
ECHDC1-216ENST00000479525 TMEM57Q8N5G2 664 aa21.61■■□□□ 1.05
ECHDC1-216ENST00000479525 ARHGAP45Q92619 1136 aa21.61■■□□□ 1.05
ECHDC1-216ENST00000479525 COPRSQ9NQ92 184 aa21.61■■□□□ 1.05
ECHDC1-216ENST00000479525 DAGLAQ9Y4D2 1042 aa21.61■■□□□ 1.05
ECHDC1-216ENST00000479525 PNMA6EA0A0J9YXQ4 647 aa21.61■■□□□ 1.05
ECHDC1-216ENST00000479525 MANSC4A6NHS7 340 aaPredicted RBP21.61■■□□□ 1.05
ECHDC1-216ENST00000479525 HDLBPQ00341 1268 aaKnown RBP21.61■■□□□ 1.05
ECHDC1-216ENST00000479525 VGLL4Q14135 290 aa21.61■■□□□ 1.05
ECHDC1-216ENST00000479525 WDR66Q8TBY9 1149 aa21.61■■□□□ 1.05
ECHDC1-216ENST00000479525 TMOD2Q9NZR1 351 aa21.61■■□□□ 1.05
ECHDC1-216ENST00000479525 DOCK2Q92608 1830 aa21.6■■□□□ 1.05
ECHDC1-216ENST00000479525 GNAI3P08754 354 aa21.6■■□□□ 1.05
ECHDC1-216ENST00000479525 CCDC102BQ68D86 513 aa21.6■■□□□ 1.05
ECHDC1-216ENST00000479525 MIGA2Q7L4E1 593 aa21.6■■□□□ 1.05
ECHDC1-216ENST00000479525 PTPN18Q99952 460 aa21.6■■□□□ 1.05
ECHDC1-216ENST00000479525 C1orf115Q9H7X2 142 aa21.6■■□□□ 1.05
ECHDC1-216ENST00000479525 MYO5AQ9Y4I1 1855 aaKnown RBP21.6■■□□□ 1.05
ECHDC1-216ENST00000479525 MAST3O60307 1309 aa21.59■■□□□ 1.05
ECHDC1-216ENST00000479525 ZBTB48P10074 688 aaPredicted RBP21.59■■□□□ 1.05
ECHDC1-216ENST00000479525 NFIAQ12857 509 aa21.59■■□□□ 1.05
ECHDC1-216ENST00000479525 ZKSCAN4Q969J2 545 aaPredicted RBP21.59■■□□□ 1.05
ECHDC1-216ENST00000479525 OTUD5Q96G74 571 aa21.59■■□□□ 1.05
ECHDC1-216ENST00000479525 TNRC18O15417 2968 aaPredicted RBP21.58■■□□□ 1.05
ECHDC1-216ENST00000479525 A0A1B0GUL7 405 aa21.58■■□□□ 1.04
ECHDC1-216ENST00000479525 LDHBP07195 334 aaKnown RBP21.58■■□□□ 1.04
ECHDC1-216ENST00000479525 CDC42EP5Q6NZY7 148 aa21.58■■□□□ 1.04
ECHDC1-216ENST00000479525 HHIPL2Q6UWX4 724 aa21.58■■□□□ 1.04
ECHDC1-216ENST00000479525 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.58■■□□□ 1.04
ECHDC1-216ENST00000479525 XAGE2Q96GT9 111 aa21.58■■□□□ 1.04
ECHDC1-216ENST00000479525 NEUROD6Q96NK8 337 aa21.58■■□□□ 1.04
ECHDC1-216ENST00000479525 FBXO3Q9UK99 471 aa21.58■■□□□ 1.04
ECHDC1-216ENST00000479525 HPS5Q9UPZ3 1129 aa21.58■■□□□ 1.04
ECHDC1-216ENST00000479525 IPO8O15397 1037 aaKnown RBP21.57■■□□□ 1.04
ECHDC1-216ENST00000479525 FKTNO75072 461 aa21.57■■□□□ 1.04
ECHDC1-216ENST00000479525 SLURP2P0DP57 97 aa21.57■■□□□ 1.04
ECHDC1-216ENST00000479525 MAP3K9P80192 1104 aa21.57■■□□□ 1.04
ECHDC1-216ENST00000479525 CRHR2Q13324 411 aa21.57■■□□□ 1.04
ECHDC1-216ENST00000479525 RASGRF1Q13972 1273 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms