RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 WNK4Q96J92 1243 aa9.7□□□□□ -0.86
HMGCL-205ENST00000479458 C9orf78Q9NZ63 289 aaPredicted RBP9.7□□□□□ -0.86
HMGCL-205ENST00000479458 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
HMGCL-205ENST00000479458 KIF16BQ96L93 1317 aa9.7□□□□□ -0.86
HMGCL-205ENST00000479458 WTIPA6NIX2 430 aaPredicted RBP9.69□□□□□ -0.86
HMGCL-205ENST00000479458 WNT10BO00744 389 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 UTYO14607 1347 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 RIMBP2O15034 1052 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 GJA8P48165 433 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 GPSM2P81274 684 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 FOXO4P98177 505 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 DOK7Q18PE1 504 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 LRIT3Q3SXY7 679 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 EPHA10Q5JZY3 1008 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 PODNQ7Z5L7 613 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 APOBEC3FQ8IUX4 373 aaKnown RBP9.69□□□□□ -0.86
HMGCL-205ENST00000479458 ANKRD18AQ8IVF6 992 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.69□□□□□ -0.86
HMGCL-205ENST00000479458 SLC10A4Q96EP9 437 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 CDC5LQ99459 802 aaKnown RBP9.69□□□□□ -0.86
HMGCL-205ENST00000479458 API5Q9BZZ5 524 aaKnown RBP9.69□□□□□ -0.86
HMGCL-205ENST00000479458 TSPYL2Q9H2G4 693 aaPredicted RBP9.69□□□□□ -0.86
HMGCL-205ENST00000479458 MTMR10Q9NXD2 777 aa9.69□□□□□ -0.86
HMGCL-205ENST00000479458 SPEF2Q9C093 1822 aa9.68□□□□□ -0.86
HMGCL-205ENST00000479458 SSC5DA1L4H1 1573 aa9.68□□□□□ -0.86
HMGCL-205ENST00000479458 NBPF7P0C2Y1 421 aaPredicted RBP9.68□□□□□ -0.86
HMGCL-205ENST00000479458 CD44P16070 742 aaKnown RBP9.68□□□□□ -0.86
HMGCL-205ENST00000479458 ITGA6P23229 1130 aa9.68□□□□□ -0.86
HMGCL-205ENST00000479458 NBPF9Q3BBW0 867 aa9.68□□□□□ -0.86
HMGCL-205ENST00000479458 PRAMEF18Q5VWM3 479 aa9.68□□□□□ -0.86
HMGCL-205ENST00000479458 DEFB123Q8N688 67 aa9.68□□□□□ -0.86
HMGCL-205ENST00000479458 SUCLG2Q96I99 432 aa9.68□□□□□ -0.86
HMGCL-205ENST00000479458 MYO3BQ8WXR4 1341 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 USP17L3A6NCW0 530 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 USP17L4A6NCW7 530 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 BCAR3O75815 825 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 GJB1P08034 283 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 CCT4P50991 539 aaKnown RBP9.67□□□□□ -0.86
HMGCL-205ENST00000479458 LMBR1LQ6UX01 489 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 USP17L1Q7RTZ2 530 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 ARHGAP45Q92619 1136 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 KAZALD1Q96I82 304 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 PTPN18Q99952 460 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 USP44Q9H0E7 712 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 BSDC1Q9NW68 430 aaPredicted RBP9.67□□□□□ -0.86
HMGCL-205ENST00000479458 ANGEL1Q9UNK9 670 aaKnown RBP9.67□□□□□ -0.86
HMGCL-205ENST00000479458 PPP2R3BQ9Y5P8 575 aa9.67□□□□□ -0.86
HMGCL-205ENST00000479458 ECM29Q5VYK3 1845 aa9.66□□□□□ -0.86
HMGCL-205ENST00000479458 XDHP47989 1333 aa9.66□□□□□ -0.86
HMGCL-205ENST00000479458 ANKRD18BA2A2Z9 1011 aa9.66□□□□□ -0.86
HMGCL-205ENST00000479458 PPP1R12BO60237 982 aaPredicted RBP9.66□□□□□ -0.86
HMGCL-205ENST00000479458 TRIM27P14373 513 aa9.66□□□□□ -0.86
HMGCL-205ENST00000479458 IGHMBP2P38935 993 aaKnown RBP9.66□□□□□ -0.86
HMGCL-205ENST00000479458 OGFOD1Q8N543 542 aa9.66□□□□□ -0.86
HMGCL-205ENST00000479458 ZBED3Q96IU2 234 aaPredicted RBP9.66□□□□□ -0.86
HMGCL-205ENST00000479458 GDF15Q99988 308 aa9.66□□□□□ -0.86
HMGCL-205ENST00000479458 ZCCHC17Q9NP64 241 aaKnown RBP9.66□□□□□ -0.86
HMGCL-205ENST00000479458 MINPP1Q9UNW1 487 aa9.66□□□□□ -0.86
HMGCL-205ENST00000479458 CHMP3Q9Y3E7 222 aa9.66□□□□□ -0.86
HMGCL-205ENST00000479458 G3V3G9 751 aa9.65□□□□□ -0.86
HMGCL-205ENST00000479458 IPO8O15397 1037 aaKnown RBP9.65□□□□□ -0.86
HMGCL-205ENST00000479458 UFL1O94874 794 aa9.65□□□□□ -0.86
HMGCL-205ENST00000479458 IFIT5Q13325 482 aaKnown RBP9.65□□□□□ -0.86
HMGCL-205ENST00000479458 RABL6Q3YEC7 729 aaPredicted RBP9.65□□□□□ -0.86
HMGCL-205ENST00000479458 ATF7IPQ6VMQ6 1270 aa9.65□□□□□ -0.86
HMGCL-205ENST00000479458 MS4A4AQ96JQ5 239 aa9.65□□□□□ -0.86
HMGCL-205ENST00000479458 BICC1Q9H694 974 aaKnown RBP9.65□□□□□ -0.86
HMGCL-205ENST00000479458 ZFYVE28Q9HCC9 887 aa9.65□□□□□ -0.86
HMGCL-205ENST00000479458 ANKIB1Q9P2G1 1089 aa9.65□□□□□ -0.86
HMGCL-205ENST00000479458 GGA1Q9UJY5 639 aa9.65□□□□□ -0.86
HMGCL-205ENST00000479458 TNNQ9UQP3 1299 aa9.65□□□□□ -0.86
HMGCL-205ENST00000479458 ECM2O94769 699 aaPredicted RBP9.64□□□□□ -0.87
HMGCL-205ENST00000479458 CHRM1P11229 460 aaPredicted RBP9.64□□□□□ -0.87
HMGCL-205ENST00000479458 ATP2B4P23634 1241 aa9.64□□□□□ -0.87
HMGCL-205ENST00000479458 CCDC57Q2TAC2 916 aa9.64□□□□□ -0.87
HMGCL-205ENST00000479458 FAM109BQ6ICB4 259 aaPredicted RBP9.64□□□□□ -0.87
HMGCL-205ENST00000479458 ANKRD44Q8N8A2 993 aa9.64□□□□□ -0.87
HMGCL-205ENST00000479458 HELBQ8NG08 1087 aaPredicted RBP9.64□□□□□ -0.87
HMGCL-205ENST00000479458 SH3TC2Q8TF17 1288 aa9.64□□□□□ -0.87
HMGCL-205ENST00000479458 FRAT1Q92837 279 aaPredicted RBP9.64□□□□□ -0.87
HMGCL-205ENST00000479458 MPHOSPH8Q99549 860 aa9.64□□□□□ -0.87
HMGCL-205ENST00000479458 SCAF8Q9UPN6 1271 aaKnown RBP9.64□□□□□ -0.87
HMGCL-205ENST00000479458 A0A1B0GUL6 1792 aa9.64□□□□□ -0.87
HMGCL-205ENST00000479458 PRUNE2Q8WUY3 3088 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 ALPK3Q96L96 1907 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 HAX1O00165 279 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 EVI5O60447 810 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 CENPBP07199 599 aaPredicted RBP9.63□□□□□ -0.87
HMGCL-205ENST00000479458 UBTFL1P0CB47 393 aaPredicted RBP9.63□□□□□ -0.87
HMGCL-205ENST00000479458 GJA5P36382 358 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 LACTBP83111 547 aaPredicted RBP9.63□□□□□ -0.87
HMGCL-205ENST00000479458 CHRNDQ07001 517 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 KIF22Q14807 665 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 DACT2Q5SW24 774 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 STRIP1Q5VSL9 837 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 ZKSCAN2Q63HK3 967 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 ANKRD13AQ8IZ07 590 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 ZNF594Q96JF6 807 aaPredicted RBP9.63□□□□□ -0.87
HMGCL-205ENST00000479458 CLMNQ96JQ2 1002 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 MEIS3Q99687 375 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms