RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-210	ENST00000479295	MYH13	Q9UKX3	1938 aa		11.99	□□□□□ -0.49
PTPN18-210	ENST00000479295		F8W031	263 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN18-210	ENST00000479295	HMMR	O75330	724 aa		11.99	□□□□□ -0.49
PTPN18-210	ENST00000479295	CHAF1A	Q13111	956 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN18-210	ENST00000479295	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.99	□□□□□ -0.49
PTPN18-210	ENST00000479295	FAM163A	Q96GL9	167 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN18-210	ENST00000479295	HMG20B	Q9P0W2	317 aa		11.99	□□□□□ -0.49
PTPN18-210	ENST00000479295	DBNL	Q9UJU6	430 aa	Known RBP	11.99	□□□□□ -0.49
PTPN18-210	ENST00000479295	PPP2R3B	Q9Y5P8	575 aa		11.99	□□□□□ -0.49
PTPN18-210	ENST00000479295	MAST3	O60307	1309 aa		11.99	□□□□□ -0.49
PTPN18-210	ENST00000479295	RAB11FIP3	O75154	756 aa		11.98	□□□□□ -0.49
PTPN18-210	ENST00000479295	FRAT2	O75474	233 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN18-210	ENST00000479295	UQCRFS1P1	P0C7P4	283 aa		11.98	□□□□□ -0.49
PTPN18-210	ENST00000479295	FKBP1B	P68106	108 aa		11.98	□□□□□ -0.49
PTPN18-210	ENST00000479295	DEFB115	Q30KQ5	88 aa		11.98	□□□□□ -0.49
PTPN18-210	ENST00000479295	FKBP1C	Q5VVH2	108 aa		11.98	□□□□□ -0.49
PTPN18-210	ENST00000479295	ZGPAT	Q8N5A5	531 aa	Known RBP	11.98	□□□□□ -0.49
PTPN18-210	ENST00000479295	RHPN1	Q8TCX5	695 aa		11.98	□□□□□ -0.49
PTPN18-210	ENST00000479295	NEUROD6	Q96NK8	337 aa		11.98	□□□□□ -0.49
PTPN18-210	ENST00000479295	DBNDD2	Q9BQY9	259 aa		11.98	□□□□□ -0.49
PTPN18-210	ENST00000479295	EXOC6B	Q9Y2D4	811 aa		11.98	□□□□□ -0.49
PTPN18-210	ENST00000479295	GAK	O14976	1311 aa		11.97	□□□□□ -0.49
PTPN18-210	ENST00000479295	PRDX5	P30044	214 aa		11.97	□□□□□ -0.49
PTPN18-210	ENST00000479295	MCAM	P43121	646 aa		11.97	□□□□□ -0.49
PTPN18-210	ENST00000479295	TEKT1	Q969V4	418 aa		11.97	□□□□□ -0.49
PTPN18-210	ENST00000479295	KIF1BP	Q96EK5	621 aa		11.97	□□□□□ -0.49
PTPN18-210	ENST00000479295	GBA2	Q9HCG7	927 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN18-210	ENST00000479295	ZNF70	Q9UC06	446 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN18-210	ENST00000479295	AKAP11	Q9UKA4	1901 aa		11.97	□□□□□ -0.49
PTPN18-210	ENST00000479295	PAPPA2	Q9BXP8	1791 aa		11.97	□□□□□ -0.49
PTPN18-210	ENST00000479295	MYO1B	O43795	1136 aa		11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	VEGFB	P49765	207 aa		11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	OS9	Q13438	667 aa	Predicted RBP	11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	AAMP	Q13685	434 aa		11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	MAP3K11	Q16584	847 aa		11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	SPATA5	Q8NB90	893 aa		11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	ZNF384	Q8TF68	577 aa		11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	TEPSIN	Q96N21	525 aa		11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	DEFB129	Q9H1M3	183 aa		11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	DCTPP1	Q9H773	170 aa		11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	MKRN1	Q9UHC7	482 aa	Known RBP	11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	DAGLA	Q9Y4D2	1042 aa		11.96	□□□□□ -0.49
PTPN18-210	ENST00000479295	SSC5D	A1L4H1	1573 aa		11.96	□□□□□ -0.5
PTPN18-210	ENST00000479295	LDHB	P07195	334 aa	Known RBP	11.95	□□□□□ -0.5
PTPN18-210	ENST00000479295	TNFAIP1	Q13829	316 aa		11.95	□□□□□ -0.5
PTPN18-210	ENST00000479295	CCDC158	Q5M9N0	1113 aa		11.95	□□□□□ -0.5
PTPN18-210	ENST00000479295	FAM83A	Q86UY5	434 aa		11.95	□□□□□ -0.5
PTPN18-210	ENST00000479295	TDRD3	Q9H7E2	651 aa	Known RBP	11.95	□□□□□ -0.5
PTPN18-210	ENST00000479295	TLR7	Q9NYK1	1049 aa	Known RBP	11.95	□□□□□ -0.5
PTPN18-210	ENST00000479295	ABT1	Q9ULW3	272 aa	Known RBP	11.95	□□□□□ -0.5
PTPN18-210	ENST00000479295	PCDHB15	Q9Y5E8	787 aa		11.95	□□□□□ -0.5
PTPN18-210	ENST00000479295	RFX7	Q2KHR2	1363 aa		11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	WDR33	Q9C0J8	1336 aa	Known RBP	11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	CLRN2	A0PK11	232 aa		11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	UNCX	A6NJT0	531 aa		11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	ECE1	P42892	770 aa		11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	RASA3	Q14644	834 aa		11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	LDLRAD1	Q5T700	205 aa		11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	PI16	Q6UXB8	463 aa		11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	C2orf69	Q8N8R5	385 aa		11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	NSUN4	Q96CB9	384 aa	Known RBP	11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	SCAF8	Q9UPN6	1271 aa	Known RBP	11.94	□□□□□ -0.5
PTPN18-210	ENST00000479295	GPR75-ASB3	A0A0A6YYF3	556 aa		11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	FAM155A	B1AL88	458 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	MAP4K4	O95819	1239 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	CYP2E1	P05181	493 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	MAP2K2	P36507	400 aa		11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	RBM5	P52756	815 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	HUNK	P57058	714 aa		11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	DIXDC1	Q155Q3	683 aa		11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	GORAB	Q5T7V8	394 aa		11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	PRAMEF18	Q5VWM3	479 aa		11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	RGMB	Q6NW40	437 aa		11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	TMED8	Q6PL24	325 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	ERICH6	Q7L0X2	663 aa		11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	CLASRP	Q8N2M8	674 aa	Known RBP	11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	CAPNS2	Q96L46	248 aa		11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	CRBN	Q96SW2	442 aa		11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	ZNF408	Q9H9D4	720 aa		11.93	□□□□□ -0.5
PTPN18-210	ENST00000479295	NPM3	O75607	178 aa	Known RBP	11.92	□□□□□ -0.5
PTPN18-210	ENST00000479295	MECOM	Q03112	1051 aa		11.92	□□□□□ -0.5
PTPN18-210	ENST00000479295	SUPT20HL1	Q3ZLR7	823 aa		11.92	□□□□□ -0.5
PTPN18-210	ENST00000479295	TTC39A	Q5SRH9	613 aa		11.92	□□□□□ -0.5
PTPN18-210	ENST00000479295	CYP4F22	Q6NT55	531 aa		11.92	□□□□□ -0.5
PTPN18-210	ENST00000479295	CDC42EP5	Q6NZY7	148 aa		11.92	□□□□□ -0.5
PTPN18-210	ENST00000479295	AACS	Q86V21	672 aa		11.92	□□□□□ -0.5
PTPN18-210	ENST00000479295	IDI2	Q9BXS1	227 aa		11.92	□□□□□ -0.5
PTPN18-210	ENST00000479295	IL1RAPL2	Q9NP60	686 aa		11.92	□□□□□ -0.5
PTPN18-210	ENST00000479295	MROH7-TTC4	A0A0A0MT08	1334 aa		11.91	□□□□□ -0.5
PTPN18-210	ENST00000479295	SLC10A3	P09131	477 aa		11.91	□□□□□ -0.5
PTPN18-210	ENST00000479295	NF2	P35240	595 aa		11.91	□□□□□ -0.5
PTPN18-210	ENST00000479295	TNNI2	P48788	182 aa		11.91	□□□□□ -0.5
PTPN18-210	ENST00000479295	RHBDL3	P58872	404 aa		11.91	□□□□□ -0.5
PTPN18-210	ENST00000479295	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.91	□□□□□ -0.5
PTPN18-210	ENST00000479295	TBC1D9	Q6ZT07	1266 aa		11.91	□□□□□ -0.5
PTPN18-210	ENST00000479295	SLF2	Q8IX21	1173 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms