RNA–Protein interactions for RNA: ENST00000479234.1

SCAF8-206, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-206ENST00000479234 PRPF40BQ6NWY9 871 aaKnown RBP7.54□□□□□ -1.2
SCAF8-206ENST00000479234 NOL8Q76FK4 1167 aaKnown RBP7.54□□□□□ -1.2
SCAF8-206ENST00000479234 TRIM46Q7Z4K8 759 aa7.54□□□□□ -1.2
SCAF8-206ENST00000479234 ZCRB1Q8TBF4 217 aaKnown RBP7.54□□□□□ -1.2
SCAF8-206ENST00000479234 JAKMIP1Q96N16 626 aaKnown RBP7.54□□□□□ -1.2
SCAF8-206ENST00000479234 RBSNQ9H1K0 784 aa7.54□□□□□ -1.2
SCAF8-206ENST00000479234 BOLA2Q9H3K6 86 aa7.54□□□□□ -1.2
SCAF8-206ENST00000479234 KDM4CQ9H3R0 1056 aa7.54□□□□□ -1.2
SCAF8-206ENST00000479234 TMEM63CQ9P1W3 806 aa7.54□□□□□ -1.2
SCAF8-206ENST00000479234 SCN11AQ9UI33 1791 aa7.54□□□□□ -1.2
SCAF8-206ENST00000479234 A0A087WZG4 1122 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 SLC27A2O14975 620 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 SIAH2O43255 324 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 HOXA2O43364 376 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 BMP1P13497 986 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 SYT1P21579 422 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 UVSSAQ2YD98 709 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 TNNI3KQ59H18 835 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 FOXD4L5Q5VV16 416 aaPredicted RBP7.53□□□□□ -1.2
SCAF8-206ENST00000479234 USPL1Q5W0Q7 1092 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 GIGYF2Q6Y7W6 1299 aaKnown RBP7.53□□□□□ -1.2
SCAF8-206ENST00000479234 USP48Q86UV5 1035 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 EHBP1Q8NDI1 1231 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 CABLES1Q8TDN4 633 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 FOXD4L4Q8WXT5 416 aaPredicted RBP7.53□□□□□ -1.2
SCAF8-206ENST00000479234 DDX17Q92841 729 aaKnown RBP7.53□□□□□ -1.2
SCAF8-206ENST00000479234 FSD1Q9BTV5 496 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 CARD10Q9BWT7 1032 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 FPGT-TNNI3KV9GXZ4 949 aa7.53□□□□□ -1.2
SCAF8-206ENST00000479234 WDR17Q8IZU2 1322 aa7.52□□□□□ -1.2
SCAF8-206ENST00000479234 PCDH11XQ9BZA7 1347 aa7.52□□□□□ -1.2
SCAF8-206ENST00000479234 PCDH11YQ9BZA8 1340 aa7.52□□□□□ -1.2
SCAF8-206ENST00000479234 RPAP1Q9BWH6 1393 aaPredicted RBP7.52□□□□□ -1.21
SCAF8-206ENST00000479234 JCADQ9P266 1359 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 MED23Q9ULK4 1368 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 CAPN5O15484 640 aaPredicted RBP7.52□□□□□ -1.21
SCAF8-206ENST00000479234 TAF5LO75529 589 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 F13A1P00488 732 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 PDCP20941 246 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 RPS6KB1P23443 525 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 UBE2HP62256 183 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 FOXO4P98177 505 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 TFCP2Q12800 502 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 ADCK5Q3MIX3 580 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 BLOC1S2Q6QNY1 142 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 BRINP3Q76B58 766 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 CCDC191Q8NCU4 936 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 PDLIM2Q96JY6 352 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 FAM227BQ96M60 508 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 HAUS7Q99871 368 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 TEX13AQ9BXU3 409 aaPredicted RBP7.52□□□□□ -1.21
SCAF8-206ENST00000479234 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 SIL1Q9H173 461 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 TSPY26PQ9H489 355 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 CWC25Q9NXE8 425 aaPredicted RBP7.52□□□□□ -1.21
SCAF8-206ENST00000479234 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.52□□□□□ -1.21
SCAF8-206ENST00000479234 WASF2Q9Y6W5 498 aa7.52□□□□□ -1.21
SCAF8-206ENST00000479234 SOS2Q07890 1332 aaPredicted RBP7.52□□□□□ -1.21
SCAF8-206ENST00000479234 CIAO1O76071 339 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 IL2RBP14784 551 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 GJB2P29033 226 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 SSTR3P32745 418 aaPredicted RBP7.51□□□□□ -1.21
SCAF8-206ENST00000479234 IL15P40933 162 aaPredicted RBP7.51□□□□□ -1.21
SCAF8-206ENST00000479234 TRIM28Q13263 835 aaKnown RBP7.51□□□□□ -1.21
SCAF8-206ENST00000479234 ME3Q16798 604 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 MCMDC2Q4G0Z9 681 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 CCDC183Q5T5S1 534 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 NBPF14Q5TI25 921 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 NBPF10Q6P3W6 841 aaKnown RBP7.51□□□□□ -1.21
SCAF8-206ENST00000479234 LMBR1LQ6UX01 489 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 TOM1L2Q6ZVM7 507 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 UBE3BQ7Z3V4 1068 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 ZSCAN30Q86W11 494 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 CCDC83Q8IWF9 413 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 NBPF15Q8N660 670 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 FAM184AQ8NB25 1140 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.51□□□□□ -1.21
SCAF8-206ENST00000479234 HLA-CQ95604 372 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 CHMP4CQ96CF2 233 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 NUDT12Q9BQG2 462 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 HELLSQ9NRZ9 838 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 TLR7Q9NYK1 1049 aaKnown RBP7.51□□□□□ -1.21
SCAF8-206ENST00000479234 DBNLQ9UJU6 430 aaKnown RBP7.51□□□□□ -1.21
SCAF8-206ENST00000479234 NSFL1CQ9UNZ2 370 aaKnown RBP7.51□□□□□ -1.21
SCAF8-206ENST00000479234 MTMR6Q9Y217 621 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 RGPD5Q99666 1765 aa7.51□□□□□ -1.21
SCAF8-206ENST00000479234 PKD1L3Q7Z443 1732 aa7.5□□□□□ -1.21
SCAF8-206ENST00000479234 A0A0D9SFI3 127 aa7.5□□□□□ -1.21
SCAF8-206ENST00000479234 SYCE3A1L190 88 aa7.5□□□□□ -1.21
SCAF8-206ENST00000479234 ATP5J2-PTCD1G3V325 749 aa7.5□□□□□ -1.21
SCAF8-206ENST00000479234 PTCD1O75127 700 aaKnown RBP7.5□□□□□ -1.21
SCAF8-206ENST00000479234 GADD45BO75293 160 aaPredicted RBP7.5□□□□□ -1.21
SCAF8-206ENST00000479234 LARGE1O95461 756 aa7.5□□□□□ -1.21
SCAF8-206ENST00000479234 HMGB1P09429 215 aaKnown RBP7.5□□□□□ -1.21
SCAF8-206ENST00000479234 CPA1P15085 419 aa7.5□□□□□ -1.21
SCAF8-206ENST00000479234 MCM5P33992 734 aa7.5□□□□□ -1.21
SCAF8-206ENST00000479234 KBTBD3Q8NAB2 608 aa7.5□□□□□ -1.21
SCAF8-206ENST00000479234 KLHDC4Q8TBB5 520 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms