RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 TEPSINQ96N21 525 aa13.97□□□□□ -0.17
HDLBP-237ENST00000479169 PUS3Q9BZE2 481 aaKnown RBP13.97□□□□□ -0.17
HDLBP-237ENST00000479169 TMEM39BQ9GZU3 492 aa13.97□□□□□ -0.17
HDLBP-237ENST00000479169 HIBADHP31937 336 aaKnown RBP13.96□□□□□ -0.17
HDLBP-237ENST00000479169 TNFAIP1Q13829 316 aa13.96□□□□□ -0.17
HDLBP-237ENST00000479169 VGLL4Q14135 290 aa13.96□□□□□ -0.17
HDLBP-237ENST00000479169 HABP4Q5JVS0 413 aaKnown RBP13.96□□□□□ -0.17
HDLBP-237ENST00000479169 BRI3BPQ8WY22 251 aa13.96□□□□□ -0.17
HDLBP-237ENST00000479169 GCC1Q96CN9 775 aa13.96□□□□□ -0.17
HDLBP-237ENST00000479169 FAM84BQ96KN1 310 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-237ENST00000479169 SERPINA10Q9UK55 444 aa13.96□□□□□ -0.17
HDLBP-237ENST00000479169 CRKP46108 304 aa13.95□□□□□ -0.18
HDLBP-237ENST00000479169 UBE4AQ14139 1066 aa13.95□□□□□ -0.18
HDLBP-237ENST00000479169 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-237ENST00000479169 C9orf78Q9NZ63 289 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-237ENST00000479169 IQSEC3Q9UPP2 1182 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-237ENST00000479169 MYH13Q9UKX3 1938 aa13.95□□□□□ -0.18
HDLBP-237ENST00000479169 AK9Q5TCS8 1911 aa13.94□□□□□ -0.18
HDLBP-237ENST00000479169 TRIOBPQ9H2D6 2365 aa13.94□□□□□ -0.18
HDLBP-237ENST00000479169 CCL15-CCL14A0A0B4J2E2 113 aa13.94□□□□□ -0.18
HDLBP-237ENST00000479169 TAF1CQ15572 869 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-237ENST00000479169 CCL15Q16663 113 aa13.94□□□□□ -0.18
HDLBP-237ENST00000479169 SLC4A10Q6U841 1118 aa13.94□□□□□ -0.18
HDLBP-237ENST00000479169 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
HDLBP-237ENST00000479169 FAM43AQ8N2R8 423 aa13.94□□□□□ -0.18
HDLBP-237ENST00000479169 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDLBP-237ENST00000479169 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
HDLBP-237ENST00000479169 SUCLG2Q96I99 432 aa13.94□□□□□ -0.18
HDLBP-237ENST00000479169 PTCH2Q9Y6C5 1203 aa13.94□□□□□ -0.18
HDLBP-237ENST00000479169 CACNB3P54284 484 aa13.93□□□□□ -0.18
HDLBP-237ENST00000479169 MAP3K9P80192 1104 aa13.93□□□□□ -0.18
HDLBP-237ENST00000479169 CHAF1AQ13111 956 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-237ENST00000479169 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
HDLBP-237ENST00000479169 KAZALD1Q96I82 304 aa13.93□□□□□ -0.18
HDLBP-237ENST00000479169 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
HDLBP-237ENST00000479169 ALDH1L1O75891 902 aa13.92□□□□□ -0.18
HDLBP-237ENST00000479169 MYCP01106 439 aaPredicted RBP13.92□□□□□ -0.18
HDLBP-237ENST00000479169 GTF2A2P52657 109 aa13.92□□□□□ -0.18
HDLBP-237ENST00000479169 SLC9C1Q4G0N8 1177 aa13.92□□□□□ -0.18
HDLBP-237ENST00000479169 TMEM106CQ9BVX2 250 aa13.92□□□□□ -0.18
HDLBP-237ENST00000479169 ZFYVE28Q9HCC9 887 aa13.92□□□□□ -0.18
HDLBP-237ENST00000479169 MRS2Q9HD23 443 aa13.92□□□□□ -0.18
HDLBP-237ENST00000479169 RIPOR2Q9Y4F9 1068 aa13.92□□□□□ -0.18
HDLBP-237ENST00000479169 CSADQ9Y600 493 aa13.92□□□□□ -0.18
HDLBP-237ENST00000479169 TNNI2P48788 182 aa13.91□□□□□ -0.18
HDLBP-237ENST00000479169 LRRC24Q50LG9 513 aa13.91□□□□□ -0.18
HDLBP-237ENST00000479169 FBXO33Q7Z6M2 555 aa13.91□□□□□ -0.18
HDLBP-237ENST00000479169 ARHGAP39Q9C0H5 1083 aa13.91□□□□□ -0.18
HDLBP-237ENST00000479169 SRCIN1Q9C0H9 1055 aa13.91□□□□□ -0.18
HDLBP-237ENST00000479169 SNCAIPQ9Y6H5 919 aa13.91□□□□□ -0.18
HDLBP-237ENST00000479169 SPDYE5A6NIY4 337 aa13.9□□□□□ -0.18
HDLBP-237ENST00000479169 ECM2O94769 699 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-237ENST00000479169 NBPF7P0C2Y1 421 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-237ENST00000479169 VPS37DQ86XT2 251 aa13.9□□□□□ -0.18
HDLBP-237ENST00000479169 BICC1Q9H694 974 aaKnown RBP13.9□□□□□ -0.18
HDLBP-237ENST00000479169 SZT2Q5T011 3432 aa13.9□□□□□ -0.18
HDLBP-237ENST00000479169 MROH5Q6ZUA9 1318 aa13.9□□□□□ -0.19
HDLBP-237ENST00000479169 BTBD19C9JJ37 291 aa13.89□□□□□ -0.19
HDLBP-237ENST00000479169 FRAT2O75474 233 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-237ENST00000479169 SLC4A8Q2Y0W8 1093 aa13.89□□□□□ -0.19
HDLBP-237ENST00000479169 METTL24Q5JXM2 366 aa13.89□□□□□ -0.19
HDLBP-237ENST00000479169 SH3TC2Q8TF17 1288 aa13.89□□□□□ -0.19
HDLBP-237ENST00000479169 ZKSCAN4Q969J2 545 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-237ENST00000479169 TEKT1Q969V4 418 aa13.89□□□□□ -0.19
HDLBP-237ENST00000479169 WRNIP1Q96S55 665 aa13.89□□□□□ -0.19
HDLBP-237ENST00000479169 IRF6O14896 467 aa13.88□□□□□ -0.19
HDLBP-237ENST00000479169 BCAMP50895 628 aa13.88□□□□□ -0.19
HDLBP-237ENST00000479169 FXR1P51114 621 aaKnown RBP eCLIP13.88□□□□□ -0.196e-6■■■□□ 17.2
HDLBP-237ENST00000479169 HDLBPQ00341 1268 aaKnown RBP13.88□□□□□ -0.19
HDLBP-237ENST00000479169 ARHGEF6Q15052 776 aa13.88□□□□□ -0.19
HDLBP-237ENST00000479169 NBPF11Q86T75 865 aa13.88□□□□□ -0.19
HDLBP-237ENST00000479169 ERO1BQ86YB8 467 aa13.88□□□□□ -0.19
HDLBP-237ENST00000479169 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
HDLBP-237ENST00000479169 VGLL2Q8N8G2 317 aa13.88□□□□□ -0.19
HDLBP-237ENST00000479169 KLHDC4Q8TBB5 520 aa13.88□□□□□ -0.19
HDLBP-237ENST00000479169 UTYO14607 1347 aa13.88□□□□□ -0.19
HDLBP-237ENST00000479169 RANBP2P49792 3224 aaKnown RBP13.87□□□□□ -0.19
HDLBP-237ENST00000479169 TLR2O60603 784 aa13.87□□□□□ -0.19
HDLBP-237ENST00000479169 CETPP11597 493 aa13.87□□□□□ -0.19
HDLBP-237ENST00000479169 LACTBP83111 547 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-237ENST00000479169 RABL6Q3YEC7 729 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-237ENST00000479169 CAVIN4Q5BKX8 364 aa13.87□□□□□ -0.19
HDLBP-237ENST00000479169 APOBEC3HQ6NTF7 200 aaKnown RBP13.87□□□□□ -0.19
HDLBP-237ENST00000479169 TBC1D22AQ8WUA7 517 aa13.87□□□□□ -0.19
HDLBP-237ENST00000479169 ZDHHC15Q96MV8 337 aa13.87□□□□□ -0.19
HDLBP-237ENST00000479169 TMOD2Q9NZR1 351 aa13.87□□□□□ -0.19
HDLBP-237ENST00000479169 MGAMO43451 1857 aa13.87□□□□□ -0.19
HDLBP-237ENST00000479169 PDE8BO95263 885 aa13.86□□□□□ -0.19
HDLBP-237ENST00000479169 PPIL2Q13356 520 aa13.86□□□□□ -0.19
HDLBP-237ENST00000479169 SNAPC2Q13487 334 aa13.86□□□□□ -0.19
HDLBP-237ENST00000479169 MIGA2Q7L4E1 593 aa13.86□□□□□ -0.19
HDLBP-237ENST00000479169 FAM83AQ86UY5 434 aa13.86□□□□□ -0.19
HDLBP-237ENST00000479169 COLQQ9Y215 455 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-237ENST00000479169 WDHD1O75717 1129 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-237ENST00000479169 CTGFP29279 349 aa13.85□□□□□ -0.19
HDLBP-237ENST00000479169 INPP5BP32019 993 aa13.85□□□□□ -0.19
HDLBP-237ENST00000479169 KIF22Q14807 665 aa13.85□□□□□ -0.19
HDLBP-237ENST00000479169 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-237ENST00000479169 ZCCHC17Q9NP64 241 aaKnown RBP13.85□□□□□ -0.19
HDLBP-237ENST00000479169 RPAP1Q9BWH6 1393 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms