RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ADAMTSL4Q6UY14 1074 aa8.41□□□□□ -1.06
CCDC171-207ENST00000478913 TMC4Q7Z404 712 aa8.41□□□□□ -1.06
CCDC171-207ENST00000478913 RAD54L2Q9Y4B4 1467 aa8.4□□□□□ -1.06
CCDC171-207ENST00000478913 SPRED3Q2MJR0 410 aa8.4□□□□□ -1.06
CCDC171-207ENST00000478913 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.06
CCDC171-207ENST00000478913 LINC00114Q6XXX2 140 aa8.4□□□□□ -1.06
CCDC171-207ENST00000478913 DTHD1Q6ZMT9 781 aa8.4□□□□□ -1.06
CCDC171-207ENST00000478913 DMRTC2Q8IXT2 367 aaPredicted RBP8.4□□□□□ -1.06
CCDC171-207ENST00000478913 BEND7Q8N7W2 519 aaPredicted RBP8.4□□□□□ -1.06
CCDC171-207ENST00000478913 MUC3BQ9H195 1237 aa8.4□□□□□ -1.06
CCDC171-207ENST00000478913 SH2B1Q9NRF2 756 aaPredicted RBP8.4□□□□□ -1.06
CCDC171-207ENST00000478913 FAM8A1Q9UBU6 413 aa8.4□□□□□ -1.06
CCDC171-207ENST00000478913 SOX13Q9UN79 622 aa8.4□□□□□ -1.06
CCDC171-207ENST00000478913 PPME1Q9Y570 386 aa8.4□□□□□ -1.06
CCDC171-207ENST00000478913 AK5Q9Y6K8 562 aa8.4□□□□□ -1.06
CCDC171-207ENST00000478913 SPDYE3A6NKU9 549 aa8.39□□□□□ -1.07
CCDC171-207ENST00000478913 SORBS3O60504 671 aa8.39□□□□□ -1.07
CCDC171-207ENST00000478913 EPHA1P21709 976 aa8.39□□□□□ -1.07
CCDC171-207ENST00000478913 GSTT1P30711 240 aa8.39□□□□□ -1.07
CCDC171-207ENST00000478913 BAG6P46379 1132 aa8.39□□□□□ -1.07
CCDC171-207ENST00000478913 TRIM11Q96F44 468 aa8.39□□□□□ -1.07
CCDC171-207ENST00000478913 VTI1BQ9UEU0 232 aa8.39□□□□□ -1.07
CCDC171-207ENST00000478913 PRG4Q92954 1404 aaPredicted RBP8.38□□□□□ -1.07
CCDC171-207ENST00000478913 H3BRJ5 948 aa8.38□□□□□ -1.07
CCDC171-207ENST00000478913 TOM1O60784 492 aa8.38□□□□□ -1.07
CCDC171-207ENST00000478913 USP17L7P0C7H9 530 aa8.38□□□□□ -1.07
CCDC171-207ENST00000478913 XRCC5P13010 732 aaKnown RBP8.38□□□□□ -1.07
CCDC171-207ENST00000478913 ITPKAP23677 461 aa8.38□□□□□ -1.07
CCDC171-207ENST00000478913 CDC25BP30305 580 aa8.38□□□□□ -1.07
CCDC171-207ENST00000478913 FAM117BQ6P1L5 589 aa8.38□□□□□ -1.07
CCDC171-207ENST00000478913 PLVAPQ9BX97 442 aa8.38□□□□□ -1.07
CCDC171-207ENST00000478913 MADDQ8WXG6 1647 aa8.37□□□□□ -1.07
CCDC171-207ENST00000478913 ZNF335Q9H4Z2 1342 aaPredicted RBP8.37□□□□□ -1.07
CCDC171-207ENST00000478913 LINC01387J3KSC0 135 aa8.37□□□□□ -1.07
CCDC171-207ENST00000478913 K7ELQ4 463 aaPredicted RBP8.37□□□□□ -1.07
CCDC171-207ENST00000478913 PTPN12Q05209 780 aaKnown RBP8.37□□□□□ -1.07
CCDC171-207ENST00000478913 TXNDC11Q6PKC3 985 aa8.37□□□□□ -1.07
CCDC171-207ENST00000478913 KRTAP4-12Q9BQ66 201 aa8.37□□□□□ -1.07
CCDC171-207ENST00000478913 CLEC4MQ9H2X3 399 aaPredicted RBP8.37□□□□□ -1.07
CCDC171-207ENST00000478913 ZNF576Q9H609 170 aa8.37□□□□□ -1.07
CCDC171-207ENST00000478913 ZFYVE1Q9HBF4 777 aa8.37□□□□□ -1.07
CCDC171-207ENST00000478913 NOP53Q9NZM5 478 aaKnown RBP8.37□□□□□ -1.07
CCDC171-207ENST00000478913 AKAP2Q9Y2D5 859 aa8.37□□□□□ -1.07
CCDC171-207ENST00000478913 PEG3Q9GZU2 1588 aa8.36□□□□□ -1.07
CCDC171-207ENST00000478913 RAC1P63000 192 aa8.36□□□□□ -1.07
CCDC171-207ENST00000478913 IKBKEQ14164 716 aa8.36□□□□□ -1.07
CCDC171-207ENST00000478913 VN1R5Q7Z5H4 357 aa8.36□□□□□ -1.07
CCDC171-207ENST00000478913 TEX14Q8IWB6 1497 aa8.35□□□□□ -1.07
CCDC171-207ENST00000478913 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
CCDC171-207ENST00000478913 PCDH1Q08174 1060 aa8.35□□□□□ -1.07
CCDC171-207ENST00000478913 LCE3BQ5TA77 95 aa8.35□□□□□ -1.07
CCDC171-207ENST00000478913 DTWD1Q8N5C7 304 aa8.35□□□□□ -1.07
CCDC171-207ENST00000478913 C3orf58Q8NDZ4 430 aa8.35□□□□□ -1.07
CCDC171-207ENST00000478913 SLC7A3Q8WY07 619 aa8.35□□□□□ -1.07
CCDC171-207ENST00000478913 SRA1Q9HD15 236 aaKnown RBP8.35□□□□□ -1.07
CCDC171-207ENST00000478913 ADCY10Q96PN6 1610 aa8.34□□□□□ -1.07
CCDC171-207ENST00000478913 A0A0A0MRY4 1105 aa8.34□□□□□ -1.07
CCDC171-207ENST00000478913 MRPL58Q14197 206 aaKnown RBP8.34□□□□□ -1.07
CCDC171-207ENST00000478913 PRRT3Q5FWE3 981 aa8.34□□□□□ -1.07
CCDC171-207ENST00000478913 MAP4K3Q8IVH8 894 aa8.34□□□□□ -1.07
CCDC171-207ENST00000478913 ZNF428Q96B54 188 aa8.34□□□□□ -1.07
CCDC171-207ENST00000478913 MRRFQ96E11 262 aaKnown RBP8.34□□□□□ -1.07
CCDC171-207ENST00000478913 CRELD1Q96HD1 420 aa8.34□□□□□ -1.07
CCDC171-207ENST00000478913 GRIN2BQ13224 1484 aa8.33□□□□□ -1.08
CCDC171-207ENST00000478913 STRCQ7RTU9 1775 aa8.33□□□□□ -1.08
CCDC171-207ENST00000478913 FSCN2O14926 492 aa8.33□□□□□ -1.08
CCDC171-207ENST00000478913 ESRRAP11474 423 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-207ENST00000478913 ARL4DP49703 201 aa8.33□□□□□ -1.08
CCDC171-207ENST00000478913 TRIM28Q13263 835 aaKnown RBP8.33□□□□□ -1.08
CCDC171-207ENST00000478913 SETDB1Q15047 1291 aa8.33□□□□□ -1.08
CCDC171-207ENST00000478913 RPS26P11Q5JNZ5 115 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-207ENST00000478913 FMR1NBQ8N0W7 255 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-207ENST00000478913 WNT8BQ93098 351 aa8.33□□□□□ -1.08
CCDC171-207ENST00000478913 CARD10Q9BWT7 1032 aa8.33□□□□□ -1.08
CCDC171-207ENST00000478913 SEC31BQ9NQW1 1179 aa8.33□□□□□ -1.08
CCDC171-207ENST00000478913 GPN3Q9UHW5 284 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-207ENST00000478913 PPM1HQ9ULR3 514 aa8.33□□□□□ -1.08
CCDC171-207ENST00000478913 TTF2Q9UNY4 1162 aaKnown RBP8.33□□□□□ -1.08
CCDC171-207ENST00000478913 SETBP1Q9Y6X0 1596 aa8.32□□□□□ -1.08
CCDC171-207ENST00000478913 SOGA1O94964 1423 aa8.32□□□□□ -1.08
CCDC171-207ENST00000478913 UNCXA6NJT0 531 aa8.32□□□□□ -1.08
CCDC171-207ENST00000478913 FAM229AH3BQW9 127 aa8.32□□□□□ -1.08
CCDC171-207ENST00000478913 DCAF11Q8TEB1 546 aa8.32□□□□□ -1.08
CCDC171-207ENST00000478913 TTBK1Q5TCY1 1321 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-207ENST00000478913 ASXL2Q76L83 1435 aa8.31□□□□□ -1.08
CCDC171-207ENST00000478913 SOX1O00570 391 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-207ENST00000478913 DEAF1O75398 565 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-207ENST00000478913 B3GALT4O96024 378 aa8.31□□□□□ -1.08
CCDC171-207ENST00000478913 CTSHP09668 335 aa8.31□□□□□ -1.08
CCDC171-207ENST00000478913 C19orf57Q0VDD7 668 aa8.31□□□□□ -1.08
CCDC171-207ENST00000478913 ZNF423Q2M1K9 1284 aa8.31□□□□□ -1.08
CCDC171-207ENST00000478913 TPTE2Q6XPS3 522 aa8.31□□□□□ -1.08
CCDC171-207ENST00000478913 FBXO11Q86XK2 927 aa8.31□□□□□ -1.08
CCDC171-207ENST00000478913 KLHL23Q8NBE8 558 aa8.31□□□□□ -1.08
CCDC171-207ENST00000478913 DDX54Q8TDD1 881 aaKnown RBP8.31□□□□□ -1.08
CCDC171-207ENST00000478913 KRTAP9-9Q9BYP9 154 aa8.31□□□□□ -1.08
CCDC171-207ENST00000478913 KRTAP9-4Q9BYQ2 154 aa8.31□□□□□ -1.08
CCDC171-207ENST00000478913 OSGEPQ9NPF4 335 aa8.31□□□□□ -1.08
CCDC171-207ENST00000478913 FBXO24O75426 580 aa8.3□□□□□ -1.08
CCDC171-207ENST00000478913 VAMP1P23763 118 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms