RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 CNNM1Q9NRU3 951 aa19.77■□□□□ 0.76
GARNL3-215ENST00000478702 TRIM27P14373 513 aa19.76■□□□□ 0.75
GARNL3-215ENST00000478702 VEZTQ9HBM0 779 aa19.76■□□□□ 0.75
GARNL3-215ENST00000478702 ZSWIM8A7E2V4 1837 aa19.76■□□□□ 0.75
GARNL3-215ENST00000478702 UNCXA6NJT0 531 aa19.75■□□□□ 0.75
GARNL3-215ENST00000478702 IPO8O15397 1037 aaKnown RBP19.75■□□□□ 0.75
GARNL3-215ENST00000478702 MYO1BO43795 1136 aa19.75■□□□□ 0.75
GARNL3-215ENST00000478702 UBTFL1P0CB47 393 aaPredicted RBP19.75■□□□□ 0.75
GARNL3-215ENST00000478702 CAP1Q01518 475 aa19.75■□□□□ 0.75
GARNL3-215ENST00000478702 SUPT20HL1Q3ZLR7 823 aa19.75■□□□□ 0.75
GARNL3-215ENST00000478702 INTS3Q68E01 1043 aaKnown RBP19.75■□□□□ 0.75
GARNL3-215ENST00000478702 ATF7IPQ6VMQ6 1270 aa19.75■□□□□ 0.75
GARNL3-215ENST00000478702 POTEFA5A3E0 1075 aa19.74■□□□□ 0.75
GARNL3-215ENST00000478702 CRHR2Q13324 411 aa19.74■□□□□ 0.75
GARNL3-215ENST00000478702 RASA3Q14644 834 aa19.74■□□□□ 0.75
GARNL3-215ENST00000478702 PTPN18Q99952 460 aa19.74■□□□□ 0.75
GARNL3-215ENST00000478702 FAM205AQ6ZU69 1335 aa19.74■□□□□ 0.75
GARNL3-215ENST00000478702 PLIN1O60240 522 aa19.73■□□□□ 0.75
GARNL3-215ENST00000478702 CD99L2Q8TCZ2 262 aa19.73■□□□□ 0.75
GARNL3-215ENST00000478702 FRAT1Q92837 279 aaPredicted RBP19.73■□□□□ 0.75
GARNL3-215ENST00000478702 MEIS3Q99687 375 aa19.73■□□□□ 0.75
GARNL3-215ENST00000478702 PUS3Q9BZE2 481 aaKnown RBP19.73■□□□□ 0.75
GARNL3-215ENST00000478702 TNNQ9UQP3 1299 aa19.73■□□□□ 0.75
GARNL3-215ENST00000478702 TESPA1A2RU30 521 aaPredicted RBP19.72■□□□□ 0.75
GARNL3-215ENST00000478702 IREB2P48200 963 aaKnown RBP19.72■□□□□ 0.75
GARNL3-215ENST00000478702 RBM5P52756 815 aaKnown RBP eCLIP19.72■□□□□ 0.75
GARNL3-215ENST00000478702 SPDYE2Q495Y8 402 aa19.72■□□□□ 0.75
GARNL3-215ENST00000478702 CDAN1Q8IWY9 1227 aa19.72■□□□□ 0.75
GARNL3-215ENST00000478702 ANKRD13AQ8IZ07 590 aa19.72■□□□□ 0.75
GARNL3-215ENST00000478702 TDRD7Q8NHU6 1098 aaKnown RBP19.72■□□□□ 0.75
GARNL3-215ENST00000478702 PTPN22Q9Y2R2 807 aa19.72■□□□□ 0.75
GARNL3-215ENST00000478702 MROH5Q6ZUA9 1318 aa19.72■□□□□ 0.75
GARNL3-215ENST00000478702 RFX5P48382 616 aaPredicted RBP19.71■□□□□ 0.75
GARNL3-215ENST00000478702 ZKSCAN2Q63HK3 967 aa19.71■□□□□ 0.75
GARNL3-215ENST00000478702 ERO1AQ96HE7 468 aa19.71■□□□□ 0.75
GARNL3-215ENST00000478702 TEPSINQ96N21 525 aa19.71■□□□□ 0.75
GARNL3-215ENST00000478702 ZNF70Q9UC06 446 aaPredicted RBP19.71■□□□□ 0.75
GARNL3-215ENST00000478702 RIPOR2Q9Y4F9 1068 aa19.71■□□□□ 0.75
GARNL3-215ENST00000478702 KLHDC4Q8TBB5 520 aa19.7■□□□□ 0.74
GARNL3-215ENST00000478702 TDRD3Q9H7E2 651 aaKnown RBP19.7■□□□□ 0.74
GARNL3-215ENST00000478702 ELP3Q9H9T3 547 aa19.7■□□□□ 0.74
GARNL3-215ENST00000478702 HDAC5Q9UQL6 1122 aa19.7■□□□□ 0.74
GARNL3-215ENST00000478702 LRRFIP2Q9Y608 721 aaKnown RBP19.7■□□□□ 0.74
GARNL3-215ENST00000478702 GYG1P46976 350 aa19.69■□□□□ 0.74
GARNL3-215ENST00000478702 LRRC24Q50LG9 513 aa19.69■□□□□ 0.74
GARNL3-215ENST00000478702 MFSD14BQ5SR56 506 aa19.69■□□□□ 0.74
GARNL3-215ENST00000478702 VGLL2Q8N8G2 317 aa19.69■□□□□ 0.74
GARNL3-215ENST00000478702 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
GARNL3-215ENST00000478702 OPTNQ96CV9 577 aa19.69■□□□□ 0.74
GARNL3-215ENST00000478702 MS4A4AQ96JQ5 239 aa19.69■□□□□ 0.74
GARNL3-215ENST00000478702 TTF2Q9UNY4 1162 aaKnown RBP19.69■□□□□ 0.74
GARNL3-215ENST00000478702 GNAI3P08754 354 aa19.68■□□□□ 0.74
GARNL3-215ENST00000478702 UBE4AQ14139 1066 aa19.68■□□□□ 0.74
GARNL3-215ENST00000478702 GRIK5Q16478 980 aa19.68■□□□□ 0.74
GARNL3-215ENST00000478702 OTUD7BQ6GQQ9 843 aa19.68■□□□□ 0.74
GARNL3-215ENST00000478702 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.68■□□□□ 0.74
GARNL3-215ENST00000478702 CLUAP1Q96AJ1 413 aa19.68■□□□□ 0.74
GARNL3-215ENST00000478702 ARMC5Q96C12 935 aa19.68■□□□□ 0.74
GARNL3-215ENST00000478702 FAM84BQ96KN1 310 aaPredicted RBP19.68■□□□□ 0.74
GARNL3-215ENST00000478702 SERPINA10Q9UK55 444 aa19.68■□□□□ 0.74
GARNL3-215ENST00000478702 SP3Q02447 781 aa19.67■□□□□ 0.74
GARNL3-215ENST00000478702 TNFAIP1Q13829 316 aa19.67■□□□□ 0.74
GARNL3-215ENST00000478702 METTL24Q5JXM2 366 aa19.67■□□□□ 0.74
GARNL3-215ENST00000478702 DZIP1LQ8IYY4 767 aaKnown RBP19.67■□□□□ 0.74
GARNL3-215ENST00000478702 EFCC1Q9HA90 598 aa19.67■□□□□ 0.74
GARNL3-215ENST00000478702 EYA2O00167 538 aa19.66■□□□□ 0.74
GARNL3-215ENST00000478702 HIBADHP31937 336 aaKnown RBP19.66■□□□□ 0.74
GARNL3-215ENST00000478702 TMEM57Q8N5G2 664 aa19.66■□□□□ 0.74
GARNL3-215ENST00000478702 BRI3BPQ8WY22 251 aa19.66■□□□□ 0.74
GARNL3-215ENST00000478702 TMEM39BQ9GZU3 492 aa19.66■□□□□ 0.74
GARNL3-215ENST00000478702 AK9Q5TCS8 1911 aa19.65■□□□□ 0.74
GARNL3-215ENST00000478702 TCP10L2B9ZVM9 353 aa19.65■□□□□ 0.74
GARNL3-215ENST00000478702 EN2P19622 333 aaPredicted RBP19.65■□□□□ 0.74
GARNL3-215ENST00000478702 CRKP46108 304 aa19.65■□□□□ 0.74
GARNL3-215ENST00000478702 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.65■□□□□ 0.74
GARNL3-215ENST00000478702 PDE8BO95263 885 aa19.64■□□□□ 0.73
GARNL3-215ENST00000478702 MTX1Q13505 466 aa19.64■□□□□ 0.73
GARNL3-215ENST00000478702 VGLL4Q14135 290 aa19.64■□□□□ 0.73
GARNL3-215ENST00000478702 GCC1Q96CN9 775 aa19.64■□□□□ 0.73
GARNL3-215ENST00000478702 FBXO3Q9UK99 471 aa19.64■□□□□ 0.73
GARNL3-215ENST00000478702 CIAO1O76071 339 aa19.63■□□□□ 0.73
GARNL3-215ENST00000478702 MAP3K9P80192 1104 aa19.63■□□□□ 0.73
GARNL3-215ENST00000478702 ATG9AQ7Z3C6 839 aa19.63■□□□□ 0.73
GARNL3-215ENST00000478702 FBXO33Q7Z6M2 555 aa19.63■□□□□ 0.73
GARNL3-215ENST00000478702 FTSJ3Q8IY81 847 aaKnown RBP19.63■□□□□ 0.73
GARNL3-215ENST00000478702 FAM43AQ8N2R8 423 aa19.63■□□□□ 0.73
GARNL3-215ENST00000478702 IQSEC3Q9UPP2 1182 aaPredicted RBP19.63■□□□□ 0.73
GARNL3-215ENST00000478702 CCL15-CCL14A0A0B4J2E2 113 aa19.62■□□□□ 0.73
GARNL3-215ENST00000478702 PUM3Q15397 648 aaKnown RBP19.62■□□□□ 0.73
GARNL3-215ENST00000478702 TAF1CQ15572 869 aaPredicted RBP19.62■□□□□ 0.73
GARNL3-215ENST00000478702 CCL15Q16663 113 aa19.62■□□□□ 0.73
GARNL3-215ENST00000478702 HABP4Q5JVS0 413 aaKnown RBP19.62■□□□□ 0.73
GARNL3-215ENST00000478702 COPRSQ9NQ92 184 aa19.62■□□□□ 0.73
GARNL3-215ENST00000478702 MGAMO43451 1857 aa19.61■□□□□ 0.73
GARNL3-215ENST00000478702 GNAI2P04899 355 aa19.61■□□□□ 0.73
GARNL3-215ENST00000478702 RLBP1P12271 317 aa19.61■□□□□ 0.73
GARNL3-215ENST00000478702 FGFR2P21802 821 aa19.61■□□□□ 0.73
GARNL3-215ENST00000478702 OTUD5Q96G74 571 aa19.61■□□□□ 0.73
GARNL3-215ENST00000478702 ZNF333Q96JL9 665 aa19.61■□□□□ 0.73
GARNL3-215ENST00000478702 SIL1Q9H173 461 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms