RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	TPCN1	Q9ULQ1	816 aa		11.37	□□□□□ -0.59
ATG7-223	ENST00000478638	ZNF804B	A4D1E1	1349 aa		11.36	□□□□□ -0.59
ATG7-223	ENST00000478638	TIAM2	Q8IVF5	1701 aa		11.36	□□□□□ -0.59
ATG7-223	ENST00000478638		M0R2C6	588 aa		11.36	□□□□□ -0.59
ATG7-223	ENST00000478638	CCDC102B	Q68D86	513 aa		11.36	□□□□□ -0.59
ATG7-223	ENST00000478638	ZSCAN25	Q6NSZ9	544 aa		11.36	□□□□□ -0.59
ATG7-223	ENST00000478638	DPP8	Q6V1X1	898 aa	Predicted RBP	11.36	□□□□□ -0.59
ATG7-223	ENST00000478638	TCHH	Q07283	1943 aa		11.36	□□□□□ -0.59
ATG7-223	ENST00000478638	WDR19	Q8NEZ3	1342 aa		11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	TCRBV5S4A2T	A0A5A2	114 aa		11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	ZSCAN22	P10073	491 aa	Predicted RBP	11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	SYT1	P21579	422 aa		11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	PHKA1	P46020	1223 aa		11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	ZNF445	P59923	1031 aa		11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	ALX1	Q15699	326 aa		11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	L1TD1	Q5T7N2	865 aa	Known RBP	11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	GORAB	Q5T7V8	394 aa		11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	DHX32	Q7L7V1	743 aa	Known RBP	11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	SUPT20H	Q8NEM7	779 aa		11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	TAOK3	Q9H2K8	898 aa		11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	CTNNA3	Q9UI47	895 aa		11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	MINPP1	Q9UNW1	487 aa		11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.35	□□□□□ -0.59
ATG7-223	ENST00000478638	C6orf229	H3BNL8	230 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	STX6	O43752	255 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	SLC5A1	P13866	664 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	GPSM2	P81274	684 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	RASSF7	Q02833	373 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	MCTP1	Q6DN14	999 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	PSMD1	Q99460	953 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.34	□□□□□ -0.59	1e-7	■■■■□ 24.2
ATG7-223	ENST00000478638	ANKRD2	Q9GZV1	360 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	PIH1D3	Q9NQM4	214 aa	Known RBP	11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	GGA1	Q9UJY5	639 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	SMC3	Q9UQE7	1217 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	MTMR6	Q9Y217	621 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	KIAA1551	Q9HCM1	1747 aa		11.34	□□□□□ -0.59
ATG7-223	ENST00000478638	PDS5A	Q29RF7	1337 aa	Known RBP	11.34	□□□□□ -0.59
ATG7-223	ENST00000478638		E7EWF7	191 aa		11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	NFKBIE	O00221	500 aa		11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	MBD3	O95983	291 aa		11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	LMNB1	P20700	586 aa		11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	ATP2B4	P23634	1241 aa		11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	UBE4A	Q14139	1066 aa		11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	SLFNL1	Q499Z3	407 aa		11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	NOL8	Q76FK4	1167 aa	Known RBP	11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	CCDC83	Q8IWF9	413 aa		11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	RGS22	Q8NE09	1264 aa		11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	SMARCC2	Q8TAQ2	1214 aa		11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	GTF3C6	Q969F1	213 aa		11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	LLPH	Q9BRT6	129 aa	Known RBP	11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.33	□□□□□ -0.6
ATG7-223	ENST00000478638	CACNA1S	Q13698	1873 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638		G3V3G9	751 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	PFKFB2	O60825	505 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	IGSF3	O75054	1194 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	UFL1	O94874	794 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	F13A1	P00488	732 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	PDE6A	P16499	860 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	PDC	P20941	246 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	GJB2	P29033	226 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	CHRND	Q07001	517 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	RASGRF1	Q13972	1273 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	DCAF8	Q5TAQ9	597 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	C9orf131	Q5VYM1	1079 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	PI16	Q6UXB8	463 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	SLC51A	Q86UW1	340 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	HELB	Q8NG08	1087 aa	Predicted RBP	11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	GPT2	Q8TD30	523 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	EYA3	Q99504	573 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	PUS7L	Q9H0K6	701 aa	Known RBP	11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	VPS33B	Q9H267	617 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	PODXL2	Q9NZ53	605 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	RNF181	Q9P0P0	153 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	KIF13B	Q9NQT8	1826 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	GOLGB1	Q14789	3259 aa	Known RBP	11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	XDH	P47989	1333 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	LTBP3	Q9NS15	1303 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	TAF1	P21675	1872 aa		11.32	□□□□□ -0.6
ATG7-223	ENST00000478638	CHD4	Q14839	1912 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	GPAA1	O43292	621 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	PPIP5K2	O43314	1243 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	FGA	P02671	866 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	IARS	P41252	1262 aa	Known RBP	11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	WASHC4	Q2M389	1173 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	TMED8	Q6PL24	325 aa	Predicted RBP	11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	LARGE2	Q8N3Y3	721 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	SPATA5	Q8NB90	893 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	TBC1D16	Q8TBP0	767 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	JDP2	Q8WYK2	163 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	ZNF274	Q96GC6	653 aa	Predicted RBP	11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	POLL	Q9UGP5	575 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	LEMD3	Q9Y2U8	911 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	ATP6V1D	Q9Y5K8	247 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	DDX49	Q9Y6V7	483 aa	Known RBP	11.31	□□□□□ -0.6

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