RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 PCCAP05165 728 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-208ENST00000478423 MCM7P33993 719 aa16.22■□□□□ 0.19
NPHP4-208ENST00000478423 SETQ01105 290 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-208ENST00000478423 MYL10Q9BUA6 226 aa16.22■□□□□ 0.19
NPHP4-208ENST00000478423 LRRC27Q9C0I9 530 aa16.22■□□□□ 0.19
NPHP4-208ENST00000478423 PATL2C9JE40 543 aaKnown RBP16.21■□□□□ 0.19
NPHP4-208ENST00000478423 USO1O60763 962 aaKnown RBP16.21■□□□□ 0.19
NPHP4-208ENST00000478423 EIF3JO75822 258 aaKnown RBP16.21■□□□□ 0.19
NPHP4-208ENST00000478423 SKILP12757 684 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 ASIC1P78348 528 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 ATL3Q6DD88 541 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 GGA1Q9UJY5 639 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 CLTCL1P53675 1640 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 CDK12Q9NYV4 1490 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-208ENST00000478423 JAK2O60674 1132 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 GNA11P29992 359 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 FAM114A1Q8IWE2 563 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 CCDC150Q8NCX0 1101 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 ERMNQ8TAM6 284 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 WDR66Q8TBY9 1149 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 PSMA7O14818 248 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 CASQ1P31415 396 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 CENPHQ9H3R5 247 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 WDR17Q8IZU2 1322 aa16.21■□□□□ 0.19
NPHP4-208ENST00000478423 GOLGA6L10A6NI86 522 aa16.21■□□□□ 0.18
NPHP4-208ENST00000478423 LIG1P18858 919 aa16.21■□□□□ 0.18
NPHP4-208ENST00000478423 SSR1P43307 286 aaKnown RBP16.21■□□□□ 0.18
NPHP4-208ENST00000478423 PPP4R3AQ6IN85 833 aa16.21■□□□□ 0.18
NPHP4-208ENST00000478423 KRI1Q8N9T8 703 aaKnown RBP16.21■□□□□ 0.18
NPHP4-208ENST00000478423 LOC102724428A0A0B4J2F2 783 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 TRIM21P19474 475 aaKnown RBP16.2■□□□□ 0.18
NPHP4-208ENST00000478423 SIK1P57059 783 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 SPAG1Q07617 926 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 SNW1Q13573 536 aaKnown RBP16.2■□□□□ 0.18
NPHP4-208ENST00000478423 UNC5CLQ8IV45 518 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 SCLT1Q96NL6 688 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 V9GY48 417 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-208ENST00000478423 MAP3K4Q9Y6R4 1608 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 E7EWF7 191 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
NPHP4-208ENST00000478423 TMCO3Q6UWJ1 677 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 SIRT2Q8IXJ6 389 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 ZBTB1Q9Y2K1 713 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 TBCAO75347 108 aaKnown RBP16.2■□□□□ 0.18
NPHP4-208ENST00000478423 STAP2Q9UGK3 403 aa16.2■□□□□ 0.18
NPHP4-208ENST00000478423 FAM193AP78312 1265 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 CETN1Q12798 172 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 RILPL1Q5EBL4 403 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 SYCP3Q8IZU3 236 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 JDP2Q8WYK2 163 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.19■□□□□ 0.18
NPHP4-208ENST00000478423 DEXIO95424 95 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 CTDSPL2Q05D32 466 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 FAM160A1Q05DH4 1040 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 LUZP1Q86V48 1076 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 DIS3L2Q8IYB7 885 aaKnown RBP16.19■□□□□ 0.18
NPHP4-208ENST00000478423 SMARCC2Q8TAQ2 1214 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 RBM28Q9NW13 759 aaKnown RBP16.19■□□□□ 0.18
NPHP4-208ENST00000478423 DBNLQ9UJU6 430 aaKnown RBP16.19■□□□□ 0.18
NPHP4-208ENST00000478423 IBSPP21815 317 aaPredicted RBP16.19■□□□□ 0.18
NPHP4-208ENST00000478423 STX17P56962 302 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 GNG11P61952 73 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 GIGYF2Q6Y7W6 1299 aaKnown RBP16.19■□□□□ 0.18
NPHP4-208ENST00000478423 PHKBQ93100 1093 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 MAP3K15Q6ZN16 1313 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 ME3Q16798 604 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 KRT79Q5XKE5 535 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 DTHD1Q6ZMT9 781 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 STXBP4Q6ZWJ1 553 aa16.19■□□□□ 0.18
NPHP4-208ENST00000478423 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
NPHP4-208ENST00000478423 ZKSCAN5Q9Y2L8 839 aa16.18■□□□□ 0.18
NPHP4-208ENST00000478423 SPDYE3A6NKU9 549 aa16.18■□□□□ 0.18
NPHP4-208ENST00000478423 AKR1B10O60218 316 aa16.18■□□□□ 0.18
NPHP4-208ENST00000478423 IQUBQ8NA54 791 aa16.18■□□□□ 0.18
NPHP4-208ENST00000478423 HAUS7Q99871 368 aa16.18■□□□□ 0.18
NPHP4-208ENST00000478423 PUS3Q9BZE2 481 aaKnown RBP16.18■□□□□ 0.18
NPHP4-208ENST00000478423 VWA3AA6NCI4 1184 aa16.18■□□□□ 0.18
NPHP4-208ENST00000478423 ZNF174Q15697 407 aa16.18■□□□□ 0.18
NPHP4-208ENST00000478423 ANO1Q5XXA6 986 aa16.18■□□□□ 0.18
NPHP4-208ENST00000478423 OSBPL3Q9H4L5 887 aa16.18■□□□□ 0.18
NPHP4-208ENST00000478423 PARP1P09874 1014 aaKnown RBP16.17■□□□□ 0.18
NPHP4-208ENST00000478423 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
NPHP4-208ENST00000478423 CDC37L1Q7L3B6 337 aa16.17■□□□□ 0.18
NPHP4-208ENST00000478423 GREM2Q9H772 168 aa16.17■□□□□ 0.18
NPHP4-208ENST00000478423 USP8P40818 1118 aa16.17■□□□□ 0.18
NPHP4-208ENST00000478423 PAFAH1B1P43034 410 aa16.17■□□□□ 0.18
NPHP4-208ENST00000478423 NOLC1Q14978 699 aaKnown RBP eCLIP16.17■□□□□ 0.182e-7■■■■■ 29.2
NPHP4-208ENST00000478423 RNF17Q9BXT8 1623 aaKnown RBP16.17■□□□□ 0.18
NPHP4-208ENST00000478423 GOLGA6L9A6NEM1 432 aa16.17■□□□□ 0.18
NPHP4-208ENST00000478423 CTAGE1Q96RT6 745 aa16.17■□□□□ 0.18
NPHP4-208ENST00000478423 BRD1O95696 1058 aa16.17■□□□□ 0.18
NPHP4-208ENST00000478423 LEO1Q8WVC0 666 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-208ENST00000478423 PLIN2Q99541 437 aa16.17■□□□□ 0.18
NPHP4-208ENST00000478423 GYG1P46976 350 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 EIF6P56537 245 aaKnown RBP16.16■□□□□ 0.18
NPHP4-208ENST00000478423 JAKMIP3Q5VZ66 844 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 LEKR1Q6ZMV7 388 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 TLR7Q9NYK1 1049 aaKnown RBP16.16■□□□□ 0.18
NPHP4-208ENST00000478423 HSPD1P10809 573 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms