RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 VGLL2Q8N8G2 317 aa16.34■□□□□ 0.21
ABCF3-212ENST00000478288 CLMNQ96JQ2 1002 aa16.34■□□□□ 0.21
ABCF3-212ENST00000478288 ZNF70Q9UC06 446 aaPredicted RBP16.34■□□□□ 0.21
ABCF3-212ENST00000478288 TESPA1A2RU30 521 aaPredicted RBP16.33■□□□□ 0.2
ABCF3-212ENST00000478288 PDE8BO95263 885 aa16.33■□□□□ 0.2
ABCF3-212ENST00000478288 CAVIN4Q5BKX8 364 aa16.33■□□□□ 0.2
ABCF3-212ENST00000478288 VPS37DQ86XT2 251 aa16.33■□□□□ 0.2
ABCF3-212ENST00000478288 TEPSINQ96N21 525 aa16.33■□□□□ 0.2
ABCF3-212ENST00000478288 MRIQ9BWK5 157 aa16.33■□□□□ 0.2
ABCF3-212ENST00000478288 R3HDMLQ9H3Y0 253 aa16.33■□□□□ 0.2
ABCF3-212ENST00000478288 SUGT1Q9Y2Z0 365 aa16.33■□□□□ 0.2
ABCF3-212ENST00000478288 IGF2BP3O00425 579 aaKnown RBP eCLIP16.32■□□□□ 0.2
ABCF3-212ENST00000478288 CRKP46108 304 aa16.32■□□□□ 0.2
ABCF3-212ENST00000478288 TNNI2P48788 182 aa16.32■□□□□ 0.2
ABCF3-212ENST00000478288 METTL24Q5JXM2 366 aa16.32■□□□□ 0.2
ABCF3-212ENST00000478288 OTUD7BQ6GQQ9 843 aa16.32■□□□□ 0.2
ABCF3-212ENST00000478288 RBBP6Q7Z6E9 1792 aaKnown RBP16.31■□□□□ 0.2
ABCF3-212ENST00000478288 LRRC24Q50LG9 513 aa16.31■□□□□ 0.2
ABCF3-212ENST00000478288 SSH1Q8WYL5 1049 aa16.31■□□□□ 0.2
ABCF3-212ENST00000478288 USP44Q9H0E7 712 aa16.31■□□□□ 0.2
ABCF3-212ENST00000478288 TDRD3Q9H7E2 651 aaKnown RBP16.31■□□□□ 0.2
ABCF3-212ENST00000478288 MAST3O60307 1309 aa16.3■□□□□ 0.2
ABCF3-212ENST00000478288 GJA5P36382 358 aa16.3■□□□□ 0.2
ABCF3-212ENST00000478288 PUM3Q15397 648 aaKnown RBP16.3■□□□□ 0.2
ABCF3-212ENST00000478288 ALDH1L2Q3SY69 923 aa16.3■□□□□ 0.2
ABCF3-212ENST00000478288 FKBP1CQ5VVH2 108 aa16.3■□□□□ 0.2
ABCF3-212ENST00000478288 TEKT1Q969V4 418 aa16.3■□□□□ 0.2
ABCF3-212ENST00000478288 ZDHHC15Q96MV8 337 aa16.3■□□□□ 0.2
ABCF3-212ENST00000478288 RPAP1Q9BWH6 1393 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-212ENST00000478288 FGFR2P21802 821 aa16.29■□□□□ 0.2
ABCF3-212ENST00000478288 SLFN5Q08AF3 891 aa16.29■□□□□ 0.2
ABCF3-212ENST00000478288 FAM83AQ86UY5 434 aa16.29■□□□□ 0.2
ABCF3-212ENST00000478288 ERO1AQ96HE7 468 aa16.29■□□□□ 0.2
ABCF3-212ENST00000478288 FRAT2O75474 233 aaPredicted RBP16.28■□□□□ 0.2
ABCF3-212ENST00000478288 GRIK5Q16478 980 aa16.28■□□□□ 0.2
ABCF3-212ENST00000478288 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.28■□□□□ 0.2
ABCF3-212ENST00000478288 OTOP1Q7RTM1 612 aa16.28■□□□□ 0.2
ABCF3-212ENST00000478288 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.28■□□□□ 0.2
ABCF3-212ENST00000478288 OPTNQ96CV9 577 aa16.28■□□□□ 0.2
ABCF3-212ENST00000478288 HOOK2Q96ED9 719 aa16.28■□□□□ 0.2
ABCF3-212ENST00000478288 TMEM39BQ9GZU3 492 aa16.28■□□□□ 0.2
ABCF3-212ENST00000478288 FBXO3Q9UK99 471 aa16.28■□□□□ 0.2
ABCF3-212ENST00000478288 TCP10L2B9ZVM9 353 aa16.27■□□□□ 0.2
ABCF3-212ENST00000478288 IFIT1P09914 478 aaKnown RBP16.27■□□□□ 0.2
ABCF3-212ENST00000478288 CT47B1P0C2W7 299 aaPredicted RBP16.27■□□□□ 0.2
ABCF3-212ENST00000478288 MAP3K9P80192 1104 aa16.27■□□□□ 0.2
ABCF3-212ENST00000478288 CHAF1AQ13111 956 aaPredicted RBP16.27■□□□□ 0.2
ABCF3-212ENST00000478288 CRHR2Q13324 411 aa16.27■□□□□ 0.2
ABCF3-212ENST00000478288 VGLL4Q14135 290 aa16.27■□□□□ 0.2
ABCF3-212ENST00000478288 PRPF38BQ5VTL8 546 aaKnown RBP16.27■□□□□ 0.2
ABCF3-212ENST00000478288 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
ABCF3-212ENST00000478288 CDAN1Q8IWY9 1227 aa16.27■□□□□ 0.2
ABCF3-212ENST00000478288 MS4A4AQ96JQ5 239 aa16.27■□□□□ 0.2
ABCF3-212ENST00000478288 PTPN18Q99952 460 aa16.27■□□□□ 0.2
ABCF3-212ENST00000478288 ELP3Q9H9T3 547 aa16.27■□□□□ 0.2
ABCF3-212ENST00000478288 EYA2O00167 538 aa16.26■□□□□ 0.19
ABCF3-212ENST00000478288 ZBTB22O15209 634 aa16.26■□□□□ 0.19
ABCF3-212ENST00000478288 RFX5P48382 616 aaPredicted RBP16.26■□□□□ 0.19
ABCF3-212ENST00000478288 BCAMP50895 628 aa16.26■□□□□ 0.19
ABCF3-212ENST00000478288 HHIPL2Q6UWX4 724 aa16.26■□□□□ 0.19
ABCF3-212ENST00000478288 KLHDC4Q8TBB5 520 aa16.26■□□□□ 0.19
ABCF3-212ENST00000478288 LPIN2Q92539 896 aa16.26■□□□□ 0.19
ABCF3-212ENST00000478288 TMOD2Q9NZR1 351 aa16.26■□□□□ 0.19
ABCF3-212ENST00000478288 IQSEC3Q9UPP2 1182 aaPredicted RBP16.26■□□□□ 0.19
ABCF3-212ENST00000478288 TRIM17Q9Y577 477 aa16.26■□□□□ 0.19
ABCF3-212ENST00000478288 CSADQ9Y600 493 aa16.26■□□□□ 0.19
ABCF3-212ENST00000478288 SPDYE5A6NIY4 337 aa16.25■□□□□ 0.19
ABCF3-212ENST00000478288 SLC5A1P13866 664 aa16.25■□□□□ 0.19
ABCF3-212ENST00000478288 GTF2A2P52657 109 aa16.25■□□□□ 0.19
ABCF3-212ENST00000478288 APOBEC3HQ6NTF7 200 aaKnown RBP16.25■□□□□ 0.19
ABCF3-212ENST00000478288 TRMT2AQ8IZ69 625 aaKnown RBP16.25■□□□□ 0.19
ABCF3-212ENST00000478288 WDR66Q8TBY9 1149 aa16.25■□□□□ 0.19
ABCF3-212ENST00000478288 ZCCHC17Q9NP64 241 aaKnown RBP16.25■□□□□ 0.19
ABCF3-212ENST00000478288 CEP290O15078 2479 aa16.25■□□□□ 0.19
ABCF3-212ENST00000478288 CIAO1O76071 339 aa16.24■□□□□ 0.19
ABCF3-212ENST00000478288 SP3Q02447 781 aa16.24■□□□□ 0.19
ABCF3-212ENST00000478288 BRI3BPQ8WY22 251 aa16.24■□□□□ 0.19
ABCF3-212ENST00000478288 SMC4Q9NTJ3 1288 aa16.24■□□□□ 0.19
ABCF3-212ENST00000478288 PTPN22Q9Y2R2 807 aa16.24■□□□□ 0.19
ABCF3-212ENST00000478288 AK9Q5TCS8 1911 aa16.23■□□□□ 0.19
ABCF3-212ENST00000478288 ATG9AQ7Z3C6 839 aa16.23■□□□□ 0.19
ABCF3-212ENST00000478288 ARMC5Q96C12 935 aa16.23■□□□□ 0.19
ABCF3-212ENST00000478288 HDAC5Q9UQL6 1122 aa16.23■□□□□ 0.19
ABCF3-212ENST00000478288 CCL15-CCL14A0A0B4J2E2 113 aa16.22■□□□□ 0.19
ABCF3-212ENST00000478288 UBTFL1P0CB47 393 aaPredicted RBP16.22■□□□□ 0.19
ABCF3-212ENST00000478288 ARHGEF6Q15052 776 aa16.22■□□□□ 0.19
ABCF3-212ENST00000478288 CCL15Q16663 113 aa16.22■□□□□ 0.19
ABCF3-212ENST00000478288 DCAF15Q66K64 600 aa16.22■□□□□ 0.19
ABCF3-212ENST00000478288 ERO1BQ86YB8 467 aa16.22■□□□□ 0.19
ABCF3-212ENST00000478288 CD99L2Q8TCZ2 262 aa16.22■□□□□ 0.19
ABCF3-212ENST00000478288 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
ABCF3-212ENST00000478288 EFCC1Q9HA90 598 aa16.22■□□□□ 0.19
ABCF3-212ENST00000478288 ZFYVE28Q9HCC9 887 aa16.22■□□□□ 0.19
ABCF3-212ENST00000478288 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.22■□□□□ 0.19
ABCF3-212ENST00000478288 SNCAIPQ9Y6H5 919 aa16.22■□□□□ 0.19
ABCF3-212ENST00000478288 SALL1Q9NSC2 1324 aa16.21■□□□□ 0.19
ABCF3-212ENST00000478288 SEMA3EO15041 775 aa16.21■□□□□ 0.19
ABCF3-212ENST00000478288 WDHD1O75717 1129 aaPredicted RBP16.21■□□□□ 0.19
ABCF3-212ENST00000478288 CACNB3P54284 484 aa16.21■□□□□ 0.19
ABCF3-212ENST00000478288 OTUD5Q96G74 571 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms