RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 EXOC5O00471 708 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 HDGFL1Q5TGJ6 251 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 JAKMIP3Q5VZ66 844 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 EFCAB13Q8IY85 973 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 RIN2Q8WYP3 895 aaPredicted RBP11.31□□□□□ -0.6
COL13A1-207ENST00000478219 ZNF396Q96N95 335 aaPredicted RBP11.31□□□□□ -0.6
COL13A1-207ENST00000478219 MROH7-TTC4A0A0A0MT08 1334 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 PPFIA4O75335 1185 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 ABL1P00519 1130 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 FCHSD1Q86WN1 690 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 MSANTD4Q8NCY6 345 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 EHD4Q9H223 541 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 RABEP2Q9H5N1 569 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 RGPD1P0DJD0 1748 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 PXDNLA1KZ92 1463 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 MON2Q7Z3U7 1717 aa11.31□□□□□ -0.6
COL13A1-207ENST00000478219 IKBKBO14920 756 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 CLGNO14967 610 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 PFKFB2O60825 505 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 SYF2O95926 243 aaKnown RBP11.3□□□□□ -0.6
COL13A1-207ENST00000478219 CDC27P30260 824 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 TBX2Q13207 712 aaPredicted RBP11.3□□□□□ -0.6
COL13A1-207ENST00000478219 CHST3Q7LGC8 479 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 CCDC91Q7Z6B0 441 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 IL17REQ8NFR9 667 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 ITSN1Q15811 1721 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 JCADQ9P266 1359 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 SOWAHDA6NJG2 315 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 ALDH1L1O75891 902 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 RAPGEF3O95398 923 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 FDPSP14324 419 aaKnown RBP11.3□□□□□ -0.6
COL13A1-207ENST00000478219 PDE4BQ07343 736 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 HSP90AB4PQ58FF6 505 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 USPL1Q5W0Q7 1092 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 RTEL1Q9NZ71 1219 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 SUFUQ9UMX1 484 aa11.3□□□□□ -0.6
COL13A1-207ENST00000478219 A0A1W2PQ27 194 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 A0A1W2PQ64 194 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 A0A1W2PQD8 194 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 RNF40O75150 1001 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 PFKFB1P16118 471 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 HNRNPH1P31943 449 aaKnown RBP11.29□□□□□ -0.6
COL13A1-207ENST00000478219 PNOCQ13519 176 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 STK38Q15208 465 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 SF3A1Q15459 793 aaKnown RBP11.29□□□□□ -0.6
COL13A1-207ENST00000478219 NOA1Q8NC60 698 aaKnown RBP11.29□□□□□ -0.6
COL13A1-207ENST00000478219 KLHDC4Q8TBB5 520 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 GPATCH3Q96I76 525 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 DONSONQ9NYP3 566 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 HMG20BQ9P0W2 317 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 SALL1Q9NSC2 1324 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 A0A087WUV0 522 aaPredicted RBP11.29□□□□□ -0.6
COL13A1-207ENST00000478219 MYL5Q02045 173 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 FAM71BQ8TC56 605 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 GDAP1L1Q96MZ0 367 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 CEP89Q96ST8 783 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 C3P01024 1663 aa11.29□□□□□ -0.6
COL13A1-207ENST00000478219 CEP170BQ9Y4F5 1589 aaPredicted RBP11.29□□□□□ -0.6
COL13A1-207ENST00000478219 EIF3JO75822 258 aaKnown RBP11.28□□□□□ -0.6
COL13A1-207ENST00000478219 PRPF6O94906 941 aaKnown RBP11.28□□□□□ -0.6
COL13A1-207ENST00000478219 BMP6P22004 513 aa11.28□□□□□ -0.6
COL13A1-207ENST00000478219 MARCKSP29966 332 aaPredicted RBP11.28□□□□□ -0.6
COL13A1-207ENST00000478219 MAP2K2P36507 400 aa11.28□□□□□ -0.6
COL13A1-207ENST00000478219 AXDND1Q5T1B0 1012 aaPredicted RBP11.28□□□□□ -0.6
COL13A1-207ENST00000478219 FBXO31Q5XUX0 539 aaPredicted RBP11.28□□□□□ -0.6
COL13A1-207ENST00000478219 FOXP4Q8IVH2 680 aaPredicted RBP11.28□□□□□ -0.6
COL13A1-207ENST00000478219 DNAAF4Q8WXU2 420 aa11.28□□□□□ -0.6
COL13A1-207ENST00000478219 CDC23Q9UJX2 597 aa11.28□□□□□ -0.6
COL13A1-207ENST00000478219 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
COL13A1-207ENST00000478219 MNAT1P51948 309 aa11.28□□□□□ -0.6
COL13A1-207ENST00000478219 ANKRD20A12PQ8NF67 263 aa11.28□□□□□ -0.6
COL13A1-207ENST00000478219 EYA1Q99502 592 aa11.28□□□□□ -0.6
COL13A1-207ENST00000478219 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL13A1-207ENST00000478219 GPHNQ9NQX3 736 aaPredicted RBP11.28□□□□□ -0.6
COL13A1-207ENST00000478219 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
COL13A1-207ENST00000478219 KIF28PB7ZC32 967 aa11.27□□□□□ -0.6
COL13A1-207ENST00000478219 HIP1O00291 1037 aa11.27□□□□□ -0.6
COL13A1-207ENST00000478219 SPTLC2O15270 562 aa11.27□□□□□ -0.6
COL13A1-207ENST00000478219 STX10O60499 249 aa11.27□□□□□ -0.6
COL13A1-207ENST00000478219 ERLIN2O94905 339 aa11.27□□□□□ -0.6
COL13A1-207ENST00000478219 DHX8Q14562 1220 aaKnown RBP11.27□□□□□ -0.6
COL13A1-207ENST00000478219 HSP90B2PQ58FF3 399 aa11.27□□□□□ -0.6
COL13A1-207ENST00000478219 RAD9BQ6WBX8 426 aa11.27□□□□□ -0.6
COL13A1-207ENST00000478219 TXNDC2Q86VQ3 553 aa11.27□□□□□ -0.6
COL13A1-207ENST00000478219 LLPHQ9BRT6 129 aaKnown RBP11.27□□□□□ -0.6
COL13A1-207ENST00000478219 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.6
COL13A1-207ENST00000478219 CARMIL3Q8ND23 1372 aa11.27□□□□□ -0.61
COL13A1-207ENST00000478219 LAMA4Q16363 1823 aa11.27□□□□□ -0.61
COL13A1-207ENST00000478219 CCT5P48643 541 aa11.27□□□□□ -0.61
COL13A1-207ENST00000478219 CWF19L2Q2TBE0 894 aaKnown RBP11.27□□□□□ -0.61
COL13A1-207ENST00000478219 TUBE1Q9UJT0 475 aa11.27□□□□□ -0.61
COL13A1-207ENST00000478219 GOLGA6L9A6NEM1 432 aa11.26□□□□□ -0.61
COL13A1-207ENST00000478219 FOXN1O15353 648 aa11.26□□□□□ -0.61
COL13A1-207ENST00000478219 CBFA2T2O43439 604 aa11.26□□□□□ -0.61
COL13A1-207ENST00000478219 ZNF569Q5MCW4 686 aa11.26□□□□□ -0.61
COL13A1-207ENST00000478219 ATL3Q6DD88 541 aa11.26□□□□□ -0.61
COL13A1-207ENST00000478219 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
COL13A1-207ENST00000478219 IGSF22Q8N9C0 903 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms