RNA–Protein interactions for RNA: ENST00000478022.2

CHAMP1-203, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-203ENST00000478022 SLC39A6Q13433 755 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 NCOA4Q13772 614 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 DBN1Q16643 649 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 ZNF827Q17R98 1081 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 C4orf17Q53FE4 359 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 C1orf216Q8TAB5 229 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 NIFKQ9BYG3 293 aaKnown RBP6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 NUCKS1Q9H1E3 243 aaKnown RBP6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 CUEDC1Q9NWM3 386 aaPredicted RBP6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 TMOD3Q9NYL9 352 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 ADAMTS8Q9UP79 889 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 PHF24Q9UPV7 400 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 PCDHGA11Q9Y5H2 935 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 PALLDQ8WX93 1383 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 MAP3K5Q99683 1374 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 MRC1P22897 1456 aa6.76□□□□□ -1.33
CHAMP1-203ENST00000478022 C5P01031 1676 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 ERVV-2B6SEH9 535 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 CDK2AP1O14519 115 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 KCNQ3O43525 872 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 ATP9BO43861 1147 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 SLURP2P0DP57 97 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 PHKA2P46019 1235 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 CABP4P57796 275 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 GTF2IP78347 998 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 SRSF11Q05519 484 aaKnown RBP6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 ITPK1Q13572 414 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 RNFT1Q5M7Z0 435 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 MCM10Q7L590 875 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 AMIGO3Q86WK7 504 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 CLUAP1Q96AJ1 413 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 THUMPD2Q9BTF0 503 aaKnown RBP6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 SLC52A2Q9HAB3 445 aa6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 NSFL1CQ9UNZ2 370 aaKnown RBP6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 RRP7AQ9Y3A4 280 aaKnown RBP6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 MYH14Q7Z406 1995 aaKnown RBP6.75□□□□□ -1.33
CHAMP1-203ENST00000478022 CASZ1Q86V15 1759 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 CEMIPQ8WUJ3 1361 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 TJP1Q07157 1748 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 GNAT3A8MTJ3 354 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 ANP32CO43423 234 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 HSP90AB1P08238 724 aaKnown RBP6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 EFHC2Q5JST6 749 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 TBC1D9Q6ZT07 1266 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 LINC00116Q8NCU8 138 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 GAS2L2Q8NHY3 880 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 ADAMTS19Q8TE59 1207 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 GTPBP3Q969Y2 492 aaKnown RBP6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 MBIPQ9NS73 344 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 CCNL1Q9UK58 526 aaPredicted RBP6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 RBM19Q9Y4C8 960 aaKnown RBP6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 UBR2Q8IWV8 1755 aa6.74□□□□□ -1.33
CHAMP1-203ENST00000478022 COL5A3P25940 1745 aaPredicted RBP6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 UBR3Q6ZT12 1888 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 KCPQ6ZWJ8 1503 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 LOC102724428A0A0B4J2F2 783 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 USP17L3A6NCW0 530 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 USP17L4A6NCW7 530 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 A6NJY4 79 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 TMEM229AB2RXF0 380 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 PTCD1O75127 700 aaKnown RBP6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 MSX1P28360 303 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 SIK1P57059 783 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 NFE2L2Q16236 605 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 SLC15A2Q16348 729 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 USP17L2Q6R6M4 530 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 USP17L1Q7RTZ2 530 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 PNISRQ8TF01 805 aaKnown RBP6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 GLMNQ92990 594 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 CFHR5Q9BXR6 569 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 MIS18AQ9NYP9 233 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 SERTAD1Q9UHV2 236 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 C4BP0C0L5 1744 aa6.73□□□□□ -1.33
CHAMP1-203ENST00000478022 STAU1O95793 577 aaKnown RBP6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 TMPOP42166 694 aaKnown RBP6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 PLA2G4AP47712 749 aa6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 MAP3K10Q02779 954 aa6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 WDR43Q15061 677 aaKnown RBP eCLIP6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 MTFR1Q15390 333 aa6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 FIGNL1Q6PIW4 674 aa6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 DEPDC4Q8N2C3 294 aa6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 SMARCC1Q92922 1105 aaPredicted RBP6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 GPAMQ9HCL2 828 aa6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 MRS2Q9HD23 443 aa6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 PNPLA7Q6ZV29 1317 aa6.72□□□□□ -1.33
CHAMP1-203ENST00000478022 ZNF831Q5JPB2 1677 aa6.71□□□□□ -1.33
CHAMP1-203ENST00000478022 QSER1Q2KHR3 1735 aa6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 PRAMEF22A3QJZ6 481 aa6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 APAF1O14727 1248 aa6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 RIPK4P57078 832 aa6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 GAS6Q14393 721 aa6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 DNAJC10Q8IXB1 793 aa6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 LARGE2Q8N3Y3 721 aa6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 SVOPQ8N4V2 548 aa6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 RUNDC1Q96C34 613 aa6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 ZNF496Q96IT1 587 aaPredicted RBP6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 CALR3Q96L12 384 aaKnown RBP6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 UCN2Q96RP3 112 aa6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 CRISPLD1Q9H336 500 aa6.71□□□□□ -1.34
CHAMP1-203ENST00000478022 ENAMQ9NRM1 1142 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms