RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 STK11IPQ8N1F8 1099 aa7.68□□□□□ -1.18
NCKAP1-204ENST00000477988 TMEM102Q8N9M5 508 aaPredicted RBP7.68□□□□□ -1.18
NCKAP1-204ENST00000477988 BHLHE22Q8NFJ8 381 aaPredicted RBP7.68□□□□□ -1.18
NCKAP1-204ENST00000477988 STK32AQ8WU08 396 aa7.68□□□□□ -1.18
NCKAP1-204ENST00000477988 NUDT16Q96DE0 195 aaKnown RBP7.68□□□□□ -1.18
NCKAP1-204ENST00000477988 CES1P23141 567 aa7.67□□□□□ -1.18
NCKAP1-204ENST00000477988 IKBKEQ14164 716 aa7.67□□□□□ -1.18
NCKAP1-204ENST00000477988 CLP1Q92989 425 aaKnown RBP7.67□□□□□ -1.18
NCKAP1-204ENST00000477988 SLC38A3Q99624 504 aa7.67□□□□□ -1.18
NCKAP1-204ENST00000477988 ZNF777Q9ULD5 760 aaPredicted RBP7.67□□□□□ -1.18
NCKAP1-204ENST00000477988 ATG7O95352 703 aa7.66□□□□□ -1.18
NCKAP1-204ENST00000477988 BSNDQ8WZ55 320 aa7.66□□□□□ -1.18
NCKAP1-204ENST00000477988 KRTAP9-3Q9BYQ3 159 aa7.66□□□□□ -1.18
NCKAP1-204ENST00000477988 NCANO14594 1321 aa7.65□□□□□ -1.18
NCKAP1-204ENST00000477988 NFICP08651 508 aa7.65□□□□□ -1.18
NCKAP1-204ENST00000477988 PCSK2P16519 638 aa7.65□□□□□ -1.18
NCKAP1-204ENST00000477988 FUT4P22083 530 aa7.65□□□□□ -1.18
NCKAP1-204ENST00000477988 SRPK2P78362 688 aaKnown RBP7.65□□□□□ -1.18
NCKAP1-204ENST00000477988 MAP7Q14244 749 aa7.65□□□□□ -1.18
NCKAP1-204ENST00000477988 C1orf127Q8N9H9 656 aa7.65□□□□□ -1.18
NCKAP1-204ENST00000477988 NXPE3Q969Y0 559 aa7.65□□□□□ -1.18
NCKAP1-204ENST00000477988 FAM84AQ96KN4 292 aa7.65□□□□□ -1.18
NCKAP1-204ENST00000477988 EIF4EBP3O60516 100 aaPredicted RBP7.64□□□□□ -1.19
NCKAP1-204ENST00000477988 RNASE1P07998 156 aaKnown RBP7.64□□□□□ -1.19
NCKAP1-204ENST00000477988 ADH5P11766 374 aa7.64□□□□□ -1.19
NCKAP1-204ENST00000477988 LILRA6Q6PI73 481 aa7.64□□□□□ -1.19
NCKAP1-204ENST00000477988 SEZ6L2Q6UXD5 910 aa7.64□□□□□ -1.19
NCKAP1-204ENST00000477988 MISP3Q96FF7 219 aa7.64□□□□□ -1.19
NCKAP1-204ENST00000477988 SEMA6CQ9H3T2 930 aa7.64□□□□□ -1.19
NCKAP1-204ENST00000477988 RC3H2Q9HBD1 1191 aaKnown RBP7.64□□□□□ -1.19
NCKAP1-204ENST00000477988 MBNL3Q9NUK0 354 aaKnown RBP7.64□□□□□ -1.19
NCKAP1-204ENST00000477988 ACTL7BQ9Y614 415 aa7.64□□□□□ -1.19
NCKAP1-204ENST00000477988 PRRG2O14669 202 aa7.63□□□□□ -1.19
NCKAP1-204ENST00000477988 BNIP3Q12983 259 aa7.63□□□□□ -1.19
NCKAP1-204ENST00000477988 NRSN2Q9GZP1 204 aa7.63□□□□□ -1.19
NCKAP1-204ENST00000477988 ADAMTS6Q9UKP5 1117 aa7.63□□□□□ -1.19
NCKAP1-204ENST00000477988 TMEM164Q5U3C3 297 aa7.62□□□□□ -1.19
NCKAP1-204ENST00000477988 OGFOD3Q6PK18 319 aa7.62□□□□□ -1.19
NCKAP1-204ENST00000477988 C1QL4Q86Z23 238 aa7.62□□□□□ -1.19
NCKAP1-204ENST00000477988 TTC16Q8NEE8 873 aa7.62□□□□□ -1.19
NCKAP1-204ENST00000477988 ACSS3Q9H6R3 686 aa7.62□□□□□ -1.19
NCKAP1-204ENST00000477988 C1GALT1Q9NS00 363 aa7.62□□□□□ -1.19
NCKAP1-204ENST00000477988 CD8BP10966 210 aa7.61□□□□□ -1.19
NCKAP1-204ENST00000477988 ESRRAP11474 423 aaPredicted RBP7.61□□□□□ -1.19
NCKAP1-204ENST00000477988 ATCAYQ86WG3 371 aa7.61□□□□□ -1.19
NCKAP1-204ENST00000477988 EDEM1Q92611 657 aa7.61□□□□□ -1.19
NCKAP1-204ENST00000477988 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.6□□□□□ -1.19
NCKAP1-204ENST00000477988 CFPP27918 469 aa7.6□□□□□ -1.19
NCKAP1-204ENST00000477988 LRRN4CLQ8ND94 238 aa7.6□□□□□ -1.19
NCKAP1-204ENST00000477988 OSMRQ99650 979 aa7.6□□□□□ -1.19
NCKAP1-204ENST00000477988 CHRDQ9H2X0 955 aa7.6□□□□□ -1.19
NCKAP1-204ENST00000477988 GGNBP2Q9H3C7 697 aa7.6□□□□□ -1.19
NCKAP1-204ENST00000477988 PDGFAP04085 211 aa7.59□□□□□ -1.19
NCKAP1-204ENST00000477988 RAB6AP20340 208 aa7.59□□□□□ -1.19
NCKAP1-204ENST00000477988 MZF1P28698 734 aaPredicted RBP7.59□□□□□ -1.19
NCKAP1-204ENST00000477988 LCNL1Q6ZST4 164 aa7.59□□□□□ -1.19
NCKAP1-204ENST00000477988 HELQQ8TDG4 1101 aa7.59□□□□□ -1.19
NCKAP1-204ENST00000477988 TOX2Q96NM4 488 aa7.59□□□□□ -1.19
NCKAP1-204ENST00000477988 ZKSCAN3Q9BRR0 538 aa7.59□□□□□ -1.19
NCKAP1-204ENST00000477988 GSX1Q9H4S2 264 aaPredicted RBP7.59□□□□□ -1.19
NCKAP1-204ENST00000477988 FAM105AQ9NUU6 356 aa7.59□□□□□ -1.19
NCKAP1-204ENST00000477988 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.58□□□□□ -1.2
NCKAP1-204ENST00000477988 B8ZZF3 427 aa7.58□□□□□ -1.2
NCKAP1-204ENST00000477988 EDN3P14138 238 aa7.58□□□□□ -1.2
NCKAP1-204ENST00000477988 GSTM4Q03013 218 aa7.58□□□□□ -1.2
NCKAP1-204ENST00000477988 DNM1Q05193 864 aaKnown RBP7.58□□□□□ -1.2
NCKAP1-204ENST00000477988 NOM1Q5C9Z4 860 aaKnown RBP7.58□□□□□ -1.2
NCKAP1-204ENST00000477988 BHLHE41Q9C0J9 482 aaPredicted RBP7.58□□□□□ -1.2
NCKAP1-204ENST00000477988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.58□□□□□ -1.2
NCKAP1-204ENST00000477988 SEPT3Q9UH03 358 aa7.58□□□□□ -1.2
NCKAP1-204ENST00000477988 DYNC1LI2O43237 492 aaPredicted RBP7.57□□□□□ -1.2
NCKAP1-204ENST00000477988 ATP2B4P23634 1241 aa7.57□□□□□ -1.2
NCKAP1-204ENST00000477988 C8orf34Q49A92 452 aa7.57□□□□□ -1.2
NCKAP1-204ENST00000477988 SIAH1Q8IUQ4 282 aa7.57□□□□□ -1.2
NCKAP1-204ENST00000477988 LRRC10BA6NIK2 292 aa7.56□□□□□ -1.2
NCKAP1-204ENST00000477988 CTSBP07858 339 aa7.56□□□□□ -1.2
NCKAP1-204ENST00000477988 RAP1GAPP47736 663 aa7.56□□□□□ -1.2
NCKAP1-204ENST00000477988 KRTAP5-3Q6L8H2 238 aa7.56□□□□□ -1.2
NCKAP1-204ENST00000477988 PLD6Q8N2A8 252 aaKnown RBP7.56□□□□□ -1.2
NCKAP1-204ENST00000477988 PI4K2BQ8TCG2 481 aa7.56□□□□□ -1.2
NCKAP1-204ENST00000477988 NETO1Q8TDF5 533 aa7.56□□□□□ -1.2
NCKAP1-204ENST00000477988 VAV3Q9UKW4 847 aa7.56□□□□□ -1.2
NCKAP1-204ENST00000477988 TSPAN15O95858 294 aa7.55□□□□□ -1.2
NCKAP1-204ENST00000477988 BUD31P41223 144 aaPredicted RBP7.55□□□□□ -1.2
NCKAP1-204ENST00000477988 CYP27C1Q4G0S4 372 aa7.55□□□□□ -1.2
NCKAP1-204ENST00000477988 ALKBH2Q6NS38 261 aa7.55□□□□□ -1.2
NCKAP1-204ENST00000477988 DYMQ7RTS9 669 aa7.55□□□□□ -1.2
NCKAP1-204ENST00000477988 SLAIN2Q9P270 581 aa7.55□□□□□ -1.2
NCKAP1-204ENST00000477988 RAPGEFL1Q9UHV5 662 aa7.55□□□□□ -1.2
NCKAP1-204ENST00000477988 A6NHS1 94 aa7.54□□□□□ -1.2
NCKAP1-204ENST00000477988 EREGO14944 169 aa7.54□□□□□ -1.2
NCKAP1-204ENST00000477988 PRKCQQ04759 706 aa7.54□□□□□ -1.2
NCKAP1-204ENST00000477988 EHHADHQ08426 723 aa7.54□□□□□ -1.2
NCKAP1-204ENST00000477988 TTLL10Q6ZVT0 673 aa7.54□□□□□ -1.2
NCKAP1-204ENST00000477988 FLAD1Q8NFF5 587 aa7.54□□□□□ -1.2
NCKAP1-204ENST00000477988 ZSCAN18Q8TBC5 510 aaPredicted RBP7.54□□□□□ -1.2
NCKAP1-204ENST00000477988 SNX29Q8TEQ0 813 aa7.54□□□□□ -1.2
NCKAP1-204ENST00000477988 FAM53CQ9NYF3 392 aa7.54□□□□□ -1.2
NCKAP1-204ENST00000477988 ZNF503-AS2A6NEH8 195 aa7.53□□□□□ -1.2
NCKAP1-204ENST00000477988 PHACTR2O75167 634 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms