RNA–Protein interactions for RNA: ENST00000477905.1

LRRC42-205, Transcript of leucine rich repeat containing 42, humanhuman

TSL 2

Gene LRRC42, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-205ENST00000477905 MEIS3Q99687 375 aa16.66■□□□□ 0.26
LRRC42-205ENST00000477905 ZNF70Q9UC06 446 aaPredicted RBP16.66■□□□□ 0.26
LRRC42-205ENST00000477905 TSKSQ9UJT2 592 aa16.66■□□□□ 0.26
LRRC42-205ENST00000477905 PDS5AQ29RF7 1337 aaKnown RBP16.66■□□□□ 0.26
LRRC42-205ENST00000477905 SEMA3EO15041 775 aa16.65■□□□□ 0.26
LRRC42-205ENST00000477905 IPO8O15397 1037 aaKnown RBP16.65■□□□□ 0.26
LRRC42-205ENST00000477905 TRIM27P14373 513 aa16.65■□□□□ 0.26
LRRC42-205ENST00000477905 ATF7IPQ6VMQ6 1270 aa16.65■□□□□ 0.26
LRRC42-205ENST00000477905 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
LRRC42-205ENST00000477905 WDR66Q8TBY9 1149 aa16.65■□□□□ 0.26
LRRC42-205ENST00000477905 MAST3O60307 1309 aa16.65■□□□□ 0.26
LRRC42-205ENST00000477905 RPAP1Q9BWH6 1393 aaPredicted RBP16.64■□□□□ 0.26
LRRC42-205ENST00000477905 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
LRRC42-205ENST00000477905 F8W031 263 aaPredicted RBP16.64■□□□□ 0.25
LRRC42-205ENST00000477905 USP2O75604 605 aaPredicted RBP16.64■□□□□ 0.25
LRRC42-205ENST00000477905 TRPA1O75762 1119 aa16.64■□□□□ 0.25
LRRC42-205ENST00000477905 SLC5A1P13866 664 aa16.64■□□□□ 0.25
LRRC42-205ENST00000477905 SREBF2Q12772 1141 aa16.64■□□□□ 0.25
LRRC42-205ENST00000477905 APOBEC3HQ6NTF7 200 aaKnown RBP16.64■□□□□ 0.25
LRRC42-205ENST00000477905 VPS37DQ86XT2 251 aa16.64■□□□□ 0.25
LRRC42-205ENST00000477905 LRRFIP2Q9Y608 721 aaKnown RBP16.64■□□□□ 0.25
LRRC42-205ENST00000477905 CLRN2A0PK11 232 aa16.63■□□□□ 0.25
LRRC42-205ENST00000477905 NBPF12Q5TAG4 269 aaPredicted RBP16.63■□□□□ 0.25
LRRC42-205ENST00000477905 TEKT1Q969V4 418 aa16.63■□□□□ 0.25
LRRC42-205ENST00000477905 MCOLN1Q9GZU1 580 aa16.63■□□□□ 0.25
LRRC42-205ENST00000477905 TDRD3Q9H7E2 651 aaKnown RBP16.63■□□□□ 0.25
LRRC42-205ENST00000477905 CEP126Q9P2H0 1117 aa16.63■□□□□ 0.25
LRRC42-205ENST00000477905 ANGEL1Q9UNK9 670 aaKnown RBP16.63■□□□□ 0.25
LRRC42-205ENST00000477905 JAG2Q9Y219 1238 aa16.63■□□□□ 0.25
LRRC42-205ENST00000477905 ANKRD13AQ8IZ07 590 aa16.62■□□□□ 0.25
LRRC42-205ENST00000477905 MANSC4A6NHS7 340 aaPredicted RBP16.61■□□□□ 0.25
LRRC42-205ENST00000477905 ALDH1A1P00352 501 aa16.61■□□□□ 0.25
LRRC42-205ENST00000477905 IREB2P48200 963 aaKnown RBP16.61■□□□□ 0.25
LRRC42-205ENST00000477905 ATP2B3Q16720 1220 aa16.61■□□□□ 0.25
LRRC42-205ENST00000477905 TNNI2P48788 182 aa16.6■□□□□ 0.25
LRRC42-205ENST00000477905 RBM5P52756 815 aaKnown RBP eCLIP16.6■□□□□ 0.25
LRRC42-205ENST00000477905 TTLL12Q14166 644 aaPredicted RBP16.6■□□□□ 0.25
LRRC42-205ENST00000477905 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.25
LRRC42-205ENST00000477905 SLC10A4Q96EP9 437 aa16.6■□□□□ 0.25
LRRC42-205ENST00000477905 WNK4Q96J92 1243 aa16.6■□□□□ 0.25
LRRC42-205ENST00000477905 BCAR3O75815 825 aa16.59■□□□□ 0.25
LRRC42-205ENST00000477905 PKN2Q16513 984 aaKnown RBP16.59■□□□□ 0.25
LRRC42-205ENST00000477905 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.59■□□□□ 0.25
LRRC42-205ENST00000477905 MIER1Q8N108 512 aa16.59■□□□□ 0.25
LRRC42-205ENST00000477905 FAM163AQ96GL9 167 aaPredicted RBP16.59■□□□□ 0.25
LRRC42-205ENST00000477905 CLMNQ96JQ2 1002 aa16.59■□□□□ 0.25
LRRC42-205ENST00000477905 VEZTQ9HBM0 779 aa16.59■□□□□ 0.25
LRRC42-205ENST00000477905 DENND2AQ9ULE3 1009 aa16.59■□□□□ 0.25
LRRC42-205ENST00000477905 IQSEC3Q9UPP2 1182 aaPredicted RBP16.59■□□□□ 0.25
LRRC42-205ENST00000477905 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.25
LRRC42-205ENST00000477905 OTOFQ9HC10 1997 aa16.58■□□□□ 0.25
LRRC42-205ENST00000477905 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
LRRC42-205ENST00000477905 CAPN15O75808 1086 aa16.58■□□□□ 0.24
LRRC42-205ENST00000477905 DGKZQ13574 1117 aa16.58■□□□□ 0.24
LRRC42-205ENST00000477905 CTU1Q7Z7A3 348 aaKnown RBP16.58■□□□□ 0.24
LRRC42-205ENST00000477905 IFNL1Q8IU54 200 aa16.58■□□□□ 0.24
LRRC42-205ENST00000477905 MS4A4AQ96JQ5 239 aa16.58■□□□□ 0.24
LRRC42-205ENST00000477905 GNL3LQ9NVN8 582 aaKnown RBP16.58■□□□□ 0.24
LRRC42-205ENST00000477905 PA2G4Q9UQ80 394 aaKnown RBP16.58■□□□□ 0.24
LRRC42-205ENST00000477905 GAKO14976 1311 aa16.57■□□□□ 0.24
LRRC42-205ENST00000477905 ZBED9Q6R2W3 1325 aa16.57■□□□□ 0.24
LRRC42-205ENST00000477905 GPR25O00155 361 aa16.57■□□□□ 0.24
LRRC42-205ENST00000477905 GNAI2P04899 355 aa16.57■□□□□ 0.24
LRRC42-205ENST00000477905 GJA5P36382 358 aa16.57■□□□□ 0.24
LRRC42-205ENST00000477905 CHAF1AQ13111 956 aaPredicted RBP16.57■□□□□ 0.24
LRRC42-205ENST00000477905 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
LRRC42-205ENST00000477905 CCDC102BQ68D86 513 aa16.57■□□□□ 0.24
LRRC42-205ENST00000477905 CDAN1Q8IWY9 1227 aa16.57■□□□□ 0.24
LRRC42-205ENST00000477905 HOOK2Q96ED9 719 aa16.57■□□□□ 0.24
LRRC42-205ENST00000477905 TMEM39BQ9GZU3 492 aa16.57■□□□□ 0.24
LRRC42-205ENST00000477905 FZD1Q9UP38 647 aa16.57■□□□□ 0.24
LRRC42-205ENST00000477905 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
LRRC42-205ENST00000477905 RFX7Q2KHR2 1363 aa16.56■□□□□ 0.24
LRRC42-205ENST00000477905 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
LRRC42-205ENST00000477905 IGSF3O75054 1194 aa16.56■□□□□ 0.24
LRRC42-205ENST00000477905 PRDX5P30044 214 aa16.56■□□□□ 0.24
LRRC42-205ENST00000477905 PHKA1P46020 1223 aa16.56■□□□□ 0.24
LRRC42-205ENST00000477905 POLA2Q14181 598 aa16.56■□□□□ 0.24
LRRC42-205ENST00000477905 ZKSCAN2Q63HK3 967 aa16.56■□□□□ 0.24
LRRC42-205ENST00000477905 ZGPATQ8N5A5 531 aaKnown RBP16.56■□□□□ 0.24
LRRC42-205ENST00000477905 ZNF296Q8WUU4 475 aaPredicted RBP16.56■□□□□ 0.24
LRRC42-205ENST00000477905 SIL1Q9H173 461 aa16.56■□□□□ 0.24
LRRC42-205ENST00000477905 DAGLAQ9Y4D2 1042 aa16.56■□□□□ 0.24
LRRC42-205ENST00000477905 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
LRRC42-205ENST00000477905 MAP3K10Q02779 954 aa16.55■□□□□ 0.24
LRRC42-205ENST00000477905 PRKG1Q13976 671 aa16.55■□□□□ 0.24
LRRC42-205ENST00000477905 SSH3Q8TE77 659 aa16.55■□□□□ 0.24
LRRC42-205ENST00000477905 FAM151AQ8WW52 585 aa16.55■□□□□ 0.24
LRRC42-205ENST00000477905 IDI2Q9BXS1 227 aa16.55■□□□□ 0.24
LRRC42-205ENST00000477905 ZCCHC17Q9NP64 241 aaKnown RBP16.55■□□□□ 0.24
LRRC42-205ENST00000477905 GPR108Q9NPR9 543 aa16.55■□□□□ 0.24
LRRC42-205ENST00000477905 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
LRRC42-205ENST00000477905 A0A1B0GUL7 405 aa16.54■□□□□ 0.24
LRRC42-205ENST00000477905 SPDYE5A6NIY4 337 aa16.54■□□□□ 0.24
LRRC42-205ENST00000477905 TCP10L2B9ZVM9 353 aa16.54■□□□□ 0.24
LRRC42-205ENST00000477905 IGF2BP3O00425 579 aaKnown RBP eCLIP16.54■□□□□ 0.24
LRRC42-205ENST00000477905 NPM3O75607 178 aaKnown RBP16.54■□□□□ 0.24
LRRC42-205ENST00000477905 TMOD2Q9NZR1 351 aa16.54■□□□□ 0.24
LRRC42-205ENST00000477905 TNNQ9UQP3 1299 aa16.54■□□□□ 0.24
LRRC42-205ENST00000477905 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms