RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 NOS3P29474 1203 aa7.81□□□□□ -1.16
SMNDC1-205ENST00000477763 NLRP12P59046 1061 aa7.81□□□□□ -1.16
SMNDC1-205ENST00000477763 GSTM4Q03013 218 aa7.81□□□□□ -1.16
SMNDC1-205ENST00000477763 KIAA1211Q6ZU35 1233 aa7.81□□□□□ -1.16
SMNDC1-205ENST00000477763 NPM2Q86SE8 214 aaKnown RBP7.81□□□□□ -1.16
SMNDC1-205ENST00000477763 BCL2L13Q9BXK5 485 aa7.81□□□□□ -1.16
SMNDC1-205ENST00000477763 AK5Q9Y6K8 562 aa7.81□□□□□ -1.16
SMNDC1-205ENST00000477763 MEGF11A6BM72 1044 aa7.8□□□□□ -1.16
SMNDC1-205ENST00000477763 CYP11A1P05108 521 aa7.8□□□□□ -1.16
SMNDC1-205ENST00000477763 EIF4BP23588 611 aaKnown RBP7.8□□□□□ -1.16
SMNDC1-205ENST00000477763 ITGAEP38570 1179 aa7.8□□□□□ -1.16
SMNDC1-205ENST00000477763 DAB2P98082 770 aa7.8□□□□□ -1.16
SMNDC1-205ENST00000477763 FAAP100Q0VG06 881 aa7.8□□□□□ -1.16
SMNDC1-205ENST00000477763 ACAD11Q709F0 780 aa7.8□□□□□ -1.16
SMNDC1-205ENST00000477763 UBASH3BQ8TF42 649 aa7.8□□□□□ -1.16
SMNDC1-205ENST00000477763 PARP2Q9UGN5 583 aa7.8□□□□□ -1.16
SMNDC1-205ENST00000477763 LOC100289279A0A1B0GTE1 492 aa7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 IREB2P48200 963 aaKnown RBP7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 PPP2R3AQ06190 1150 aa7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 AP3B2Q13367 1082 aa7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 ZNF326Q5BKZ1 582 aaKnown RBP7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 HP1BP3Q5SSJ5 553 aaPredicted RBP7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 TMC4Q7Z404 712 aa7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 TRIM56Q9BRZ2 755 aaKnown RBP7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 SSBP4Q9BWG4 385 aaPredicted RBP7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 RNF208Q9H0X6 261 aa7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 SEMA6BQ9H3T3 888 aa7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 TMEM39AQ9NV64 488 aa7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 AKAP2Q9Y2D5 859 aa7.79□□□□□ -1.16
SMNDC1-205ENST00000477763 RBM47A0AV96 593 aaKnown RBP7.78□□□□□ -1.16
SMNDC1-205ENST00000477763 USP17L7P0C7H9 530 aa7.78□□□□□ -1.16
SMNDC1-205ENST00000477763 XPCQ01831 940 aaPredicted RBP7.78□□□□□ -1.16
SMNDC1-205ENST00000477763 PSMD2Q13200 908 aa7.78□□□□□ -1.16
SMNDC1-205ENST00000477763 DZIP1LQ8IYY4 767 aaKnown RBP7.78□□□□□ -1.16
SMNDC1-205ENST00000477763 USP26Q9BXU7 913 aa7.78□□□□□ -1.16
SMNDC1-205ENST00000477763 CEP41Q9BYV8 373 aa7.78□□□□□ -1.16
SMNDC1-205ENST00000477763 CEP44Q9C0F1 390 aa7.78□□□□□ -1.16
SMNDC1-205ENST00000477763 BCL11AQ9H165 835 aa7.78□□□□□ -1.16
SMNDC1-205ENST00000477763 POU4F3Q15319 338 aa7.77□□□□□ -1.17
SMNDC1-205ENST00000477763 RUSC1Q9BVN2 902 aa7.77□□□□□ -1.17
SMNDC1-205ENST00000477763 TMPRSS13Q9BYE2 586 aa7.77□□□□□ -1.17
SMNDC1-205ENST00000477763 RNF19AQ9NV58 838 aa7.77□□□□□ -1.17
SMNDC1-205ENST00000477763 GPN3Q9UHW5 284 aaPredicted RBP7.77□□□□□ -1.17
SMNDC1-205ENST00000477763 ALX3O95076 343 aa7.76□□□□□ -1.17
SMNDC1-205ENST00000477763 RBM25P49756 843 aaKnown RBP7.76□□□□□ -1.17
SMNDC1-205ENST00000477763 EXOSC6Q5RKV6 272 aaKnown RBP7.76□□□□□ -1.17
SMNDC1-205ENST00000477763 ANKRD34AQ69YU3 496 aa7.76□□□□□ -1.17
SMNDC1-205ENST00000477763 AGGF1Q8N302 714 aaeCLIP7.76□□□□□ -1.17
SMNDC1-205ENST00000477763 GIPC2Q8TF65 315 aa7.76□□□□□ -1.17
SMNDC1-205ENST00000477763 MEGF10Q96KG7 1140 aa7.76□□□□□ -1.17
SMNDC1-205ENST00000477763 NECAB3Q96P71 396 aaPredicted RBP7.76□□□□□ -1.17
SMNDC1-205ENST00000477763 CORO1BQ9BR76 489 aa7.76□□□□□ -1.17
SMNDC1-205ENST00000477763 KRTAP4-8Q9BYQ9 185 aa7.76□□□□□ -1.17
SMNDC1-205ENST00000477763 SUGCTQ9HAC7 445 aa7.76□□□□□ -1.17
SMNDC1-205ENST00000477763 GLB1P16278 677 aa7.75□□□□□ -1.17
SMNDC1-205ENST00000477763 MAOBP27338 520 aa7.75□□□□□ -1.17
SMNDC1-205ENST00000477763 TAGLNQ01995 201 aaKnown RBP7.75□□□□□ -1.17
SMNDC1-205ENST00000477763 RSPO4Q2I0M5 234 aaPredicted RBP7.75□□□□□ -1.17
SMNDC1-205ENST00000477763 UVSSAQ2YD98 709 aa7.75□□□□□ -1.17
SMNDC1-205ENST00000477763 SMG8Q8ND04 991 aaKnown RBP7.75□□□□□ -1.17
SMNDC1-205ENST00000477763 TPSG1Q9NRR2 321 aa7.75□□□□□ -1.17
SMNDC1-205ENST00000477763 SORBS3O60504 671 aa7.74□□□□□ -1.17
SMNDC1-205ENST00000477763 DLGAP3O95886 979 aa7.74□□□□□ -1.17
SMNDC1-205ENST00000477763 ZNF16P17020 682 aaPredicted RBP7.74□□□□□ -1.17
SMNDC1-205ENST00000477763 NKAPLQ5M9Q1 402 aa7.74□□□□□ -1.17
SMNDC1-205ENST00000477763 CYP4F12Q9HCS2 524 aa7.74□□□□□ -1.17
SMNDC1-205ENST00000477763 SYNGAP1Q96PV0 1343 aa7.74□□□□□ -1.17
SMNDC1-205ENST00000477763 ENC1O14682 589 aa7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 NME2P22392 152 aa7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 ZNF157P51786 506 aaPredicted RBP7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 HNRNPUQ00839 825 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 NUTM2GQ5VZR2 741 aa7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 FDX2Q6P4F2 183 aa7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 TPTE2Q6XPS3 522 aa7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 SV2BQ7L1I2 683 aa7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 FAM46AQ96IP4 442 aaKnown RBP7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 EMILIN2Q9BXX0 1053 aa7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 MRS2Q9HD23 443 aa7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 KRT82Q9NSB4 513 aa7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 SAMM50Q9Y512 469 aa7.73□□□□□ -1.17
SMNDC1-205ENST00000477763 E9PSI1 815 aa7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 CTSBP07858 339 aa7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 GSTP1P09211 210 aaKnown RBP7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 H2AFB1P0C5Y9 115 aa7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 H2AFB2P0C5Z0 115 aa7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 ARNTP27540 789 aa7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 ST13P50502 369 aaKnown RBP7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 PDZD3Q86UT5 571 aa7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 SULF2Q8IWU5 870 aa7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 TP53INP1Q96A56 240 aa7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 ZNF428Q96B54 188 aa7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 CRELD1Q96HD1 420 aa7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 UBL7Q96S82 380 aaPredicted RBP7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 TTF2Q9UNY4 1162 aaKnown RBP7.72□□□□□ -1.17
SMNDC1-205ENST00000477763 TIAF1O95411 115 aa7.71□□□□□ -1.18
SMNDC1-205ENST00000477763 RANGAP1P46060 587 aaPredicted RBP7.71□□□□□ -1.18
SMNDC1-205ENST00000477763 SCARA3Q6AZY7 606 aa7.71□□□□□ -1.18
SMNDC1-205ENST00000477763 FAM161BQ96MY7 647 aa7.71□□□□□ -1.18
SMNDC1-205ENST00000477763 FBXO24O75426 580 aa7.7□□□□□ -1.18
SMNDC1-205ENST00000477763 ECEL1O95672 775 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms