RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 PTCH1Q13635 1447 aa7.61□□□□□ -1.19
VPS45-207ENST00000477558 OXCT2Q9BYC2 517 aaPredicted RBP7.61□□□□□ -1.19
VPS45-207ENST00000477558 IGFLR1Q9H665 355 aa7.61□□□□□ -1.19
VPS45-207ENST00000477558 TMEM63CQ9P1W3 806 aa7.61□□□□□ -1.19
VPS45-207ENST00000477558 DCTN4Q9UJW0 460 aa7.61□□□□□ -1.19
VPS45-207ENST00000477558 GGA1Q9UJY5 639 aa7.61□□□□□ -1.19
VPS45-207ENST00000477558 TBX22Q9Y458 520 aa7.61□□□□□ -1.19
VPS45-207ENST00000477558 NCOA3Q9Y6Q9 1424 aa7.6□□□□□ -1.19
VPS45-207ENST00000477558 RARAP10276 462 aa7.6□□□□□ -1.19
VPS45-207ENST00000477558 ARAFP10398 606 aa7.6□□□□□ -1.19
VPS45-207ENST00000477558 IRS1P35568 1242 aa7.6□□□□□ -1.19
VPS45-207ENST00000477558 GPAT2Q6NUI2 795 aa7.6□□□□□ -1.19
VPS45-207ENST00000477558 KANK3Q6NY19 840 aa7.6□□□□□ -1.19
VPS45-207ENST00000477558 LYPD4Q6UWN0 246 aa7.6□□□□□ -1.19
VPS45-207ENST00000477558 NLRP13Q86W25 1043 aa7.6□□□□□ -1.19
VPS45-207ENST00000477558 ELP3Q9H9T3 547 aa7.6□□□□□ -1.19
VPS45-207ENST00000477558 METP08581 1390 aa7.59□□□□□ -1.19
VPS45-207ENST00000477558 MMP20O60882 483 aa7.59□□□□□ -1.19
VPS45-207ENST00000477558 RPLP1P05386 114 aaKnown RBP7.59□□□□□ -1.19
VPS45-207ENST00000477558 USP5P45974 858 aa7.59□□□□□ -1.19
VPS45-207ENST00000477558 MARSP56192 900 aaKnown RBP7.59□□□□□ -1.19
VPS45-207ENST00000477558 XKR5Q6UX68 686 aa7.59□□□□□ -1.19
VPS45-207ENST00000477558 ZNF438Q7Z4V0 828 aa7.59□□□□□ -1.19
VPS45-207ENST00000477558 FCHSD1Q86WN1 690 aa7.59□□□□□ -1.19
VPS45-207ENST00000477558 TTC16Q8NEE8 873 aa7.59□□□□□ -1.19
VPS45-207ENST00000477558 TMC1Q8TDI8 760 aa7.59□□□□□ -1.19
VPS45-207ENST00000477558 RBCK1Q9BYM8 510 aa7.59□□□□□ -1.19
VPS45-207ENST00000477558 ADGRF5Q8IZF2 1346 aa7.59□□□□□ -1.2
VPS45-207ENST00000477558 NALCNQ8IZF0 1738 aa7.58□□□□□ -1.2
VPS45-207ENST00000477558 SIN3BO75182 1162 aa7.58□□□□□ -1.2
VPS45-207ENST00000477558 IGHA2P01877 340 aa7.58□□□□□ -1.2
VPS45-207ENST00000477558 KCNA6P17658 529 aa7.58□□□□□ -1.2
VPS45-207ENST00000477558 ADH6P28332 368 aa7.58□□□□□ -1.2
VPS45-207ENST00000477558 TBC1D8BQ0IIM8 1120 aa7.58□□□□□ -1.2
VPS45-207ENST00000477558 NEUROD1Q13562 356 aa7.58□□□□□ -1.2
VPS45-207ENST00000477558 PDE12Q6L8Q7 609 aaKnown RBP7.58□□□□□ -1.2
VPS45-207ENST00000477558 TMC7Q7Z402 723 aa7.58□□□□□ -1.2
VPS45-207ENST00000477558 FAM129BQ96TA1 746 aa7.58□□□□□ -1.2
VPS45-207ENST00000477558 CNTN3Q9P232 1028 aa7.58□□□□□ -1.2
VPS45-207ENST00000477558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.58□□□□□ -1.2
VPS45-207ENST00000477558 ZBTB42B2RXF5 422 aa7.57□□□□□ -1.2
VPS45-207ENST00000477558 MAP3K6O95382 1288 aa7.57□□□□□ -1.2
VPS45-207ENST00000477558 CELA2BP08218 269 aaPredicted RBP7.57□□□□□ -1.2
VPS45-207ENST00000477558 SCARF2Q96GP6 870 aaPredicted RBP7.57□□□□□ -1.2
VPS45-207ENST00000477558 CITED4Q96RK1 184 aa7.57□□□□□ -1.2
VPS45-207ENST00000477558 SLC26A8Q96RN1 970 aa7.57□□□□□ -1.2
VPS45-207ENST00000477558 NIF3L1Q9GZT8 377 aa7.57□□□□□ -1.2
VPS45-207ENST00000477558 EFCC1Q9HA90 598 aa7.57□□□□□ -1.2
VPS45-207ENST00000477558 AVENQ9NQS1 362 aaPredicted RBP7.57□□□□□ -1.2
VPS45-207ENST00000477558 FOXD3Q9UJU5 478 aaPredicted RBP7.57□□□□□ -1.2
VPS45-207ENST00000477558 DLC1Q96QB1 1528 aa7.56□□□□□ -1.2
VPS45-207ENST00000477558 TRPM1Q7Z4N2 1603 aa7.56□□□□□ -1.2
VPS45-207ENST00000477558 GPR182O15218 404 aa7.56□□□□□ -1.2
VPS45-207ENST00000477558 CYP2E1P05181 493 aaPredicted RBP7.56□□□□□ -1.2
VPS45-207ENST00000477558 MLLT1Q03111 559 aaPredicted RBP7.56□□□□□ -1.2
VPS45-207ENST00000477558 ZNF326Q5BKZ1 582 aaKnown RBP7.56□□□□□ -1.2
VPS45-207ENST00000477558 TTC39BQ5VTQ0 682 aaPredicted RBP7.56□□□□□ -1.2
VPS45-207ENST00000477558 DHX32Q7L7V1 743 aaKnown RBP7.56□□□□□ -1.2
VPS45-207ENST00000477558 GOLGA6L1Q8N7Z2 621 aa7.56□□□□□ -1.2
VPS45-207ENST00000477558 C1orf127Q8N9H9 656 aa7.56□□□□□ -1.2
VPS45-207ENST00000477558 GALNT6Q8NCL4 622 aa7.56□□□□□ -1.2
VPS45-207ENST00000477558 UBE2OQ9C0C9 1292 aaKnown RBP7.56□□□□□ -1.2
VPS45-207ENST00000477558 DNAJB12Q9NXW2 375 aaKnown RBP7.56□□□□□ -1.2
VPS45-207ENST00000477558 ABI2Q9NYB9 513 aaPredicted RBP7.56□□□□□ -1.2
VPS45-207ENST00000477558 TLR7Q9NYK1 1049 aaKnown RBP7.56□□□□□ -1.2
VPS45-207ENST00000477558 GDF2Q9UK05 429 aaPredicted RBP7.56□□□□□ -1.2
VPS45-207ENST00000477558 DCCP43146 1447 aa7.56□□□□□ -1.2
VPS45-207ENST00000477558 ARHGEF28Q8N1W1 1705 aaKnown RBP7.55□□□□□ -1.2
VPS45-207ENST00000477558 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.55□□□□□ -1.2
VPS45-207ENST00000477558 TNFRSF21O75509 655 aa7.55□□□□□ -1.2
VPS45-207ENST00000477558 BCRP11274 1271 aa7.55□□□□□ -1.2
VPS45-207ENST00000477558 EHHADHQ08426 723 aa7.55□□□□□ -1.2
VPS45-207ENST00000477558 CCDC27Q2M243 656 aa7.55□□□□□ -1.2
VPS45-207ENST00000477558 TNFRSF25Q93038 417 aa7.55□□□□□ -1.2
VPS45-207ENST00000477558 MDFIQ99750 246 aa7.55□□□□□ -1.2
VPS45-207ENST00000477558 TMEM94Q12767 1356 aa7.55□□□□□ -1.2
VPS45-207ENST00000477558 ADGRB2O60241 1585 aa7.55□□□□□ -1.2
VPS45-207ENST00000477558 CDC42BPGQ6DT37 1551 aa7.55□□□□□ -1.2
VPS45-207ENST00000477558 SHISA8B8ZZ34 492 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 OIP5O43482 229 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 EPXP11678 715 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 MAP3K10Q02779 954 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 PDE3BQ13370 1112 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 ORC1Q13415 861 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 COL13A1Q5TAT6 717 aaPredicted RBP7.54□□□□□ -1.2
VPS45-207ENST00000477558 TMCO4Q5TGY1 634 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 SLCO4C1Q6ZQN7 724 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 HFE2Q6ZVN8 426 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 OR13H1Q8NG92 308 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 EDARADDQ8WWZ3 215 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 C14orf93Q9H972 538 aaKnown RBP7.54□□□□□ -1.2
VPS45-207ENST00000477558 CLSPNQ9HAW4 1339 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 LRPPRCP42704 1394 aaKnown RBP7.54□□□□□ -1.2
VPS45-207ENST00000477558 ABCC11Q96J66 1382 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 ROBO2Q9HCK4 1378 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 ADGRL3Q9HAR2 1447 aa7.54□□□□□ -1.2
VPS45-207ENST00000477558 ADARB2-AS1A8MUL3 147 aa7.53□□□□□ -1.2
VPS45-207ENST00000477558 J3QW42 95 aa7.53□□□□□ -1.2
VPS45-207ENST00000477558 PSAPP07602 524 aa7.53□□□□□ -1.2
VPS45-207ENST00000477558 ADH7P40394 386 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms