RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 COL19A1Q14993 1142 aa6.13□□□□□ -1.43
PTCD3-212ENST00000477520 MSMPQ1L6U9 139 aa6.13□□□□□ -1.43
PTCD3-212ENST00000477520 SHISA5Q8N114 240 aa6.13□□□□□ -1.43
PTCD3-212ENST00000477520 MAP7D2Q96T17 732 aa6.13□□□□□ -1.43
PTCD3-212ENST00000477520 SAP130Q9H0E3 1048 aa6.13□□□□□ -1.43
PTCD3-212ENST00000477520 PIM2Q9P1W9 311 aa6.13□□□□□ -1.43
PTCD3-212ENST00000477520 ZBED9Q6R2W3 1325 aa6.13□□□□□ -1.43
PTCD3-212ENST00000477520 ASXL2Q76L83 1435 aa6.13□□□□□ -1.43
PTCD3-212ENST00000477520 WDR7Q9Y4E6 1490 aa6.13□□□□□ -1.43
PTCD3-212ENST00000477520 TIAM1Q13009 1591 aa6.13□□□□□ -1.43
PTCD3-212ENST00000477520 UBAP1LF5GYI3 381 aa6.12□□□□□ -1.43
PTCD3-212ENST00000477520 SART1O43290 800 aaKnown RBP6.12□□□□□ -1.43
PTCD3-212ENST00000477520 FGD1P98174 961 aa6.12□□□□□ -1.43
PTCD3-212ENST00000477520 TROQ12816 1431 aaPredicted RBP6.12□□□□□ -1.43
PTCD3-212ENST00000477520 DDX10Q13206 875 aaKnown RBP6.12□□□□□ -1.43
PTCD3-212ENST00000477520 RNF123Q5XPI4 1314 aa6.12□□□□□ -1.43
PTCD3-212ENST00000477520 POU5F2Q8N7G0 328 aa6.12□□□□□ -1.43
PTCD3-212ENST00000477520 CFAP43Q8NDM7 1665 aa6.12□□□□□ -1.43
PTCD3-212ENST00000477520 PPP1R12CQ9BZL4 782 aa6.12□□□□□ -1.43
PTCD3-212ENST00000477520 PDCL3Q9H2J4 239 aa6.12□□□□□ -1.43
PTCD3-212ENST00000477520 SEC31BQ9NQW1 1179 aa6.12□□□□□ -1.43
PTCD3-212ENST00000477520 EHBP1L1Q8N3D4 1523 aa6.11□□□□□ -1.43
PTCD3-212ENST00000477520 ARID4BQ4LE39 1312 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-212ENST00000477520 KIF4AO95239 1232 aa6.11□□□□□ -1.43
PTCD3-212ENST00000477520 F13BP05160 661 aa6.11□□□□□ -1.43
PTCD3-212ENST00000477520 CYP2E1P05181 493 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-212ENST00000477520 TPM2P07951 284 aa6.11□□□□□ -1.43
PTCD3-212ENST00000477520 HNRNPUQ00839 825 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTCD3-212ENST00000477520 PDE4CQ08493 712 aa6.11□□□□□ -1.43
PTCD3-212ENST00000477520 ANKRD34AQ69YU3 496 aa6.11□□□□□ -1.43
PTCD3-212ENST00000477520 SPACA7Q96KW9 195 aa6.11□□□□□ -1.43
PTCD3-212ENST00000477520 POP1Q99575 1024 aaKnown RBP6.11□□□□□ -1.43
PTCD3-212ENST00000477520 PBX4Q9BYU1 374 aa6.11□□□□□ -1.43
PTCD3-212ENST00000477520 CCDC39Q9UFE4 941 aa6.11□□□□□ -1.43
PTCD3-212ENST00000477520 LRRIQ1Q96JM4 1722 aa6.11□□□□□ -1.43
PTCD3-212ENST00000477520 LRRC9Q6ZRR7 1453 aa6.1□□□□□ -1.43
PTCD3-212ENST00000477520 A6NJR5 290 aa6.1□□□□□ -1.43
PTCD3-212ENST00000477520 MAP4P27816 1152 aaKnown RBP6.1□□□□□ -1.43
PTCD3-212ENST00000477520 FAM117BQ6P1L5 589 aa6.1□□□□□ -1.43
PTCD3-212ENST00000477520 MTERF4Q7Z6M4 381 aaKnown RBP6.1□□□□□ -1.43
PTCD3-212ENST00000477520 FBXL6Q8N531 539 aa6.1□□□□□ -1.43
PTCD3-212ENST00000477520 CEP120Q8N960 986 aa6.1□□□□□ -1.43
PTCD3-212ENST00000477520 VRTNQ9H8Y1 702 aa6.1□□□□□ -1.43
PTCD3-212ENST00000477520 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTCD3-212ENST00000477520 ISY1Q9ULR0 285 aaKnown RBP6.1□□□□□ -1.43
PTCD3-212ENST00000477520 ANGEL1Q9UNK9 670 aaKnown RBP6.1□□□□□ -1.43
PTCD3-212ENST00000477520 KIF14Q15058 1648 aa6.1□□□□□ -1.43
PTCD3-212ENST00000477520 ABCC10Q5T3U5 1492 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 SMG6Q86US8 1419 aaKnown RBP6.09□□□□□ -1.43
PTCD3-212ENST00000477520 SUPT6HQ7KZ85 1726 aaKnown RBP6.09□□□□□ -1.43
PTCD3-212ENST00000477520 PRNPP04156 253 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 FOSL1P15407 271 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 ITGB5P18084 799 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 SCNN1AP37088 669 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 TERF1P54274 439 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 NLRP12P59046 1061 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 FAM69CQ0P6D2 419 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 AAMPQ13685 434 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 SGO2Q562F6 1265 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 FNBP4Q8N3X1 1017 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-212ENST00000477520 RUSC1Q9BVN2 902 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 ADAM19Q9H013 955 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 RNF208Q9H0X6 261 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 PNNQ9H307 717 aaKnown RBP6.09□□□□□ -1.43
PTCD3-212ENST00000477520 HIF3AQ9Y2N7 669 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 LEMD3Q9Y2U8 911 aa6.09□□□□□ -1.43
PTCD3-212ENST00000477520 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-212ENST00000477520 TNFRSF10BO14763 440 aa6.08□□□□□ -1.44
PTCD3-212ENST00000477520 PTPRAP18433 802 aa6.08□□□□□ -1.44
PTCD3-212ENST00000477520 LMOD1P29536 600 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-212ENST00000477520 TAF7LQ5H9L4 462 aa6.08□□□□□ -1.44
PTCD3-212ENST00000477520 TTC39BQ5VTQ0 682 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-212ENST00000477520 HGSNATQ68CP4 663 aa6.08□□□□□ -1.44
PTCD3-212ENST00000477520 FDX2Q6P4F2 183 aa6.08□□□□□ -1.44
PTCD3-212ENST00000477520 PRIMPOLQ96LW4 560 aa6.08□□□□□ -1.44
PTCD3-212ENST00000477520 ATG3Q9NT62 314 aa6.08□□□□□ -1.44
PTCD3-212ENST00000477520 BRPF3Q9ULD4 1205 aa6.08□□□□□ -1.44
PTCD3-212ENST00000477520 CCNB3Q8WWL7 1395 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 GLI2P10070 1586 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 H3BRJ5 948 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 PDIA4P13667 645 aaKnown RBP6.07□□□□□ -1.44
PTCD3-212ENST00000477520 ACPPP15309 386 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 BRD2P25440 801 aaKnown RBP6.07□□□□□ -1.44
PTCD3-212ENST00000477520 PIP4K2BP78356 416 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 FLIIQ13045 1269 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 B4GALNT3Q6L9W6 998 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 CAPN12Q6ZSI9 719 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 PIK3R5Q8WYR1 880 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 CLUAP1Q96AJ1 413 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 ASIC4Q96FT7 647 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 CD109Q6YHK3 1445 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 ABCA9Q8IUA7 1624 aa6.07□□□□□ -1.44
PTCD3-212ENST00000477520 DIP2BQ9P265 1576 aa6.06□□□□□ -1.44
PTCD3-212ENST00000477520 MAGI3Q5TCQ9 1506 aa6.06□□□□□ -1.44
PTCD3-212ENST00000477520 GAS2O43903 313 aaKnown RBP6.06□□□□□ -1.44
PTCD3-212ENST00000477520 RBM10P98175 930 aaKnown RBP6.06□□□□□ -1.44
PTCD3-212ENST00000477520 NFKBIBQ15653 356 aa6.06□□□□□ -1.44
PTCD3-212ENST00000477520 EFCAB2Q5VUJ9 269 aa6.06□□□□□ -1.44
PTCD3-212ENST00000477520 C16orf46Q6P387 395 aa6.06□□□□□ -1.44
PTCD3-212ENST00000477520 TP53INP2Q8IXH6 220 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms