RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, human

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF3-208	ENST00000477440	ERC1	Q8IUD2	1116 aa		31.23	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	APOBEC3F	Q8IUX4	373 aa	Known RBP	31.23	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	PDS5A	Q29RF7	1337 aa	Known RBP	31.23	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	ARID4A	P29374	1257 aa	Predicted RBP	31.22	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	HDLBP	Q00341	1268 aa	Known RBP	31.22	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	HSP90AB4P	Q58FF6	505 aa		31.22	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	EAF2	Q96CJ1	260 aa	Predicted RBP	31.22	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	TLR7	Q9NYK1	1049 aa	Known RBP	31.22	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	TLL2	Q9Y6L7	1015 aa		31.22	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	MAST3	O60307	1309 aa		31.22	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	RASSF10	A6NK89	507 aa		31.21	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	MYO1B	O43795	1136 aa		31.21	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	PRAMEF18	Q5VWM3	479 aa		31.21	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	PI16	Q6UXB8	463 aa		31.21	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	TEKT1	Q969V4	418 aa		31.21	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	DBNL	Q9UJU6	430 aa	Known RBP	31.21	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	MYH2	Q9UKX2	1941 aa		31.21	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	APBB1	O00213	710 aa		31.2	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	RHPN1	Q8TCX5	695 aa		31.2	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	CRBN	Q96SW2	442 aa		31.2	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	CCDC8	Q9H0W5	538 aa	Predicted RBP	31.2	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	HMG20B	Q9P0W2	317 aa		31.2	■■■□□ 2.59
ARHGEF3-208	ENST00000477440	MCAM	P43121	646 aa		31.19	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	SAPCD2	Q86UD0	394 aa		31.19	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	TDRD3	Q9H7E2	651 aa	Known RBP	31.19	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	VEZT	Q9HBM0	779 aa		31.19	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	IL1RAPL2	Q9NP60	686 aa		31.19	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	LDHB	P07195	334 aa	Known RBP	31.18	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	DEFB115	Q30KQ5	88 aa		31.18	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	SPDYE2	Q495Y8	402 aa		31.18	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	GBA2	Q9HCG7	927 aa	Predicted RBP	31.18	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	PAPPA2	Q9BXP8	1791 aa		31.17	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	MYO5A	Q9Y4I1	1855 aa	Known RBP	31.17	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	UQCRFS1P1	P0C7P4	283 aa		31.17	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	DIXDC1	Q155Q3	683 aa		31.17	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	TTC39A	Q5SRH9	613 aa		31.17	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	ZGPAT	Q8N5A5	531 aa	Known RBP	31.17	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	SPATA5	Q8NB90	893 aa		31.17	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	ZDHHC15	Q96MV8	337 aa		31.17	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	MRI	Q9BWK5	157 aa		31.17	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	ZNF70	Q9UC06	446 aa	Predicted RBP	31.17	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	VEGFB	P49765	207 aa		31.16	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	CCDC158	Q5M9N0	1113 aa		31.16	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	AACS	Q86V21	672 aa		31.16	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	JMY	Q8N9B5	988 aa		31.16	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	KIF1BP	Q96EK5	621 aa		31.16	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	ABCF2	Q9UG63	623 aa		31.16	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	HHIPL2	Q6UWX4	724 aa		31.15	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	DEFB129	Q9H1M3	183 aa		31.15	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	APOBEC3H	Q6NTF7	200 aa	Known RBP	31.14	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	C2orf69	Q8N8R5	385 aa		31.14	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	PCDHB15	Q9Y5E8	787 aa		31.14	■■■□□ 2.58
ARHGEF3-208	ENST00000477440	RAB11FIP3	O75154	756 aa		31.13	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	HUNK	P57058	714 aa		31.13	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	31.13	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	SNRK	Q9NRH2	765 aa		31.13	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	DAGLA	Q9Y4D2	1042 aa		31.13	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	MAST2	Q6P0Q8	1798 aa		31.12	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	CYP4F22	Q6NT55	531 aa		31.12	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	TBC1D9	Q6ZT07	1266 aa		31.12	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	THSD7B	Q9C0I4	1608 aa		31.12	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	DZIP1	Q86YF9	867 aa	Known RBP	31.11	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	ZNF512B	Q96KM6	892 aa	Predicted RBP	31.11	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	SSC5D	A1L4H1	1573 aa		31.1	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	CACNB3	P54284	484 aa		31.1	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	RASA3	Q14644	834 aa		31.1	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	SPTY2D1	Q68D10	685 aa	Predicted RBP	31.1	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	CLASRP	Q8N2M8	674 aa	Known RBP	31.1	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	HHIPL1	Q96JK4	782 aa		31.1	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	CAPNS2	Q96L46	248 aa		31.1	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	BCL11A	Q9H165	835 aa		31.1	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	PPP2R3B	Q9Y5P8	575 aa		31.1	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	WDR33	Q9C0J8	1336 aa	Known RBP	31.09	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	TCP10L2	B9ZVM9	353 aa		31.09	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	GRM1	Q13255	1194 aa		31.09	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	MOB2	Q70IA6	237 aa		31.09	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	ERICH6	Q7L0X2	663 aa		31.09	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	TNFAIP1	Q13829	316 aa		31.08	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	ZNF384	Q8TF68	577 aa		31.08	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	SUPT16H	Q9Y5B9	1047 aa	Known RBP	31.08	■■■□□ 2.57
ARHGEF3-208	ENST00000477440	NF2	P35240	595 aa		31.07	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	MECOM	Q03112	1051 aa		31.07	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	GAK	O14976	1311 aa		31.06	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	DOCK2	Q92608	1830 aa		31.06	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	ZAP70	P43403	619 aa		31.06	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	FKBP1B	P68106	108 aa		31.06	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	DCTPP1	Q9H773	170 aa		31.06	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	CYP2E1	P05181	493 aa	Predicted RBP	31.05	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	ECE1	P42892	770 aa		31.05	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	PRKG1	Q13976	671 aa		31.05	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	NBPF12	Q5TAG4	269 aa	Predicted RBP	31.05	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	CDAN1	Q8IWY9	1227 aa		31.05	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	LRRCC1	Q9C099	1032 aa		31.05	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	TMOD2	Q9NZR1	351 aa		31.05	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	FZD1	Q9UP38	647 aa		31.05	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	SMARCA5	O60264	1052 aa	Predicted RBP	31.04	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	IFIT2	P09913	472 aa	Known RBP	31.04	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	TTLL12	Q14166	644 aa	Predicted RBP	31.04	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	CDC42EP5	Q6NZY7	148 aa		31.04	■■■□□ 2.56
ARHGEF3-208	ENST00000477440	NSUN4	Q96CB9	384 aa	Known RBP	31.04	■■■□□ 2.56

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