RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 INTS3Q68E01 1043 aaKnown RBP12.54□□□□□ -0.4
COL4A5-204ENST00000477429 C15orf52Q6ZUT6 534 aaKnown RBP12.54□□□□□ -0.4
COL4A5-204ENST00000477429 FAM43AQ8N2R8 423 aa12.54□□□□□ -0.4
COL4A5-204ENST00000477429 DEFB123Q8N688 67 aa12.54□□□□□ -0.4
COL4A5-204ENST00000477429 OPTNQ96CV9 577 aa12.54□□□□□ -0.4
COL4A5-204ENST00000477429 ERO1AQ96HE7 468 aa12.54□□□□□ -0.4
COL4A5-204ENST00000477429 ANKRD2Q9GZV1 360 aa12.54□□□□□ -0.4
COL4A5-204ENST00000477429 PPP1R12BO60237 982 aaPredicted RBP12.53□□□□□ -0.4
COL4A5-204ENST00000477429 CTGFP29279 349 aa12.53□□□□□ -0.4
COL4A5-204ENST00000477429 TDRD3Q9H7E2 651 aaKnown RBP12.53□□□□□ -0.4
COL4A5-204ENST00000477429 ECM29Q5VYK3 1845 aa12.53□□□□□ -0.4
COL4A5-204ENST00000477429 ECM2O94769 699 aaPredicted RBP12.52□□□□□ -0.41
COL4A5-204ENST00000477429 KCNJ4P48050 445 aa12.52□□□□□ -0.41
COL4A5-204ENST00000477429 MMP14P50281 582 aa12.52□□□□□ -0.41
COL4A5-204ENST00000477429 SH3TC2Q8TF17 1288 aa12.52□□□□□ -0.41
COL4A5-204ENST00000477429 MPHOSPH8Q99549 860 aa12.52□□□□□ -0.41
COL4A5-204ENST00000477429 ZNF70Q9UC06 446 aaPredicted RBP12.52□□□□□ -0.41
COL4A5-204ENST00000477429 PPP2R3BQ9Y5P8 575 aa12.52□□□□□ -0.41
COL4A5-204ENST00000477429 F6X3S4 739 aa12.51□□□□□ -0.41
COL4A5-204ENST00000477429 PLIN1O60240 522 aa12.51□□□□□ -0.41
COL4A5-204ENST00000477429 IREB2P48200 963 aaKnown RBP12.51□□□□□ -0.41
COL4A5-204ENST00000477429 CACNB3P54284 484 aa12.51□□□□□ -0.41
COL4A5-204ENST00000477429 NEXNQ0ZGT2 675 aa12.51□□□□□ -0.41
COL4A5-204ENST00000477429 FLIIQ13045 1269 aa12.51□□□□□ -0.41
COL4A5-204ENST00000477429 VGLL4Q14135 290 aa12.51□□□□□ -0.41
COL4A5-204ENST00000477429 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
COL4A5-204ENST00000477429 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
COL4A5-204ENST00000477429 SHISA4Q96DD7 197 aa12.51□□□□□ -0.41
COL4A5-204ENST00000477429 TMEM39BQ9GZU3 492 aa12.51□□□□□ -0.41
COL4A5-204ENST00000477429 TCP10L2B9ZVM9 353 aa12.5□□□□□ -0.41
COL4A5-204ENST00000477429 GYG1P46976 350 aa12.5□□□□□ -0.41
COL4A5-204ENST00000477429 RBM5P52756 815 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL4A5-204ENST00000477429 TWISTNBQ3B726 338 aaPredicted RBP12.5□□□□□ -0.41
COL4A5-204ENST00000477429 SUPT20HL1Q3ZLR7 823 aa12.5□□□□□ -0.41
COL4A5-204ENST00000477429 PRKRIP1Q9H875 184 aaPredicted RBP12.5□□□□□ -0.41
COL4A5-204ENST00000477429 MTMR10Q9NXD2 777 aa12.5□□□□□ -0.41
COL4A5-204ENST00000477429 FAM205AQ6ZU69 1335 aa12.49□□□□□ -0.41
COL4A5-204ENST00000477429 CCL15-CCL14A0A0B4J2E2 113 aa12.49□□□□□ -0.41
COL4A5-204ENST00000477429 ANKRD18BA2A2Z9 1011 aa12.49□□□□□ -0.41
COL4A5-204ENST00000477429 FKBP1AP62942 108 aaKnown RBP12.49□□□□□ -0.41
COL4A5-204ENST00000477429 MTFR1Q15390 333 aa12.49□□□□□ -0.41
COL4A5-204ENST00000477429 TAF1CQ15572 869 aaPredicted RBP12.49□□□□□ -0.41
COL4A5-204ENST00000477429 CCL15Q16663 113 aa12.49□□□□□ -0.41
COL4A5-204ENST00000477429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL4A5-204ENST00000477429 TDRD7Q8NHU6 1098 aaKnown RBP12.49□□□□□ -0.41
COL4A5-204ENST00000477429 DNAAF4Q8WXU2 420 aa12.49□□□□□ -0.41
COL4A5-204ENST00000477429 PUS3Q9BZE2 481 aaKnown RBP12.49□□□□□ -0.41
COL4A5-204ENST00000477429 SNCAIPQ9Y6H5 919 aa12.49□□□□□ -0.41
COL4A5-204ENST00000477429 UNCXA6NJT0 531 aa12.48□□□□□ -0.41
COL4A5-204ENST00000477429 SLC9C1Q4G0N8 1177 aa12.48□□□□□ -0.41
COL4A5-204ENST00000477429 BEND3Q5T5X7 828 aa12.48□□□□□ -0.41
COL4A5-204ENST00000477429 LMBR1LQ6UX01 489 aa12.48□□□□□ -0.41
COL4A5-204ENST00000477429 ZNF804AQ7Z570 1209 aa12.48□□□□□ -0.41
COL4A5-204ENST00000477429 DZIP1LQ8IYY4 767 aaKnown RBP12.48□□□□□ -0.41
COL4A5-204ENST00000477429 LINS1Q8NG48 757 aa12.48□□□□□ -0.41
COL4A5-204ENST00000477429 FAM84BQ96KN1 310 aaPredicted RBP12.48□□□□□ -0.41
COL4A5-204ENST00000477429 STK31Q9BXU1 1019 aa12.48□□□□□ -0.41
COL4A5-204ENST00000477429 CHMP3Q9Y3E7 222 aa12.48□□□□□ -0.41
COL4A5-204ENST00000477429 BTBD19C9JJ37 291 aa12.47□□□□□ -0.41
COL4A5-204ENST00000477429 MAP3K9P80192 1104 aa12.47□□□□□ -0.41
COL4A5-204ENST00000477429 CALD1Q05682 793 aaKnown RBP12.47□□□□□ -0.41
COL4A5-204ENST00000477429 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
COL4A5-204ENST00000477429 MFSD14BQ5SR56 506 aa12.47□□□□□ -0.41
COL4A5-204ENST00000477429 OTUD7BQ6GQQ9 843 aa12.47□□□□□ -0.41
COL4A5-204ENST00000477429 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
COL4A5-204ENST00000477429 ZKSCAN4Q969J2 545 aaPredicted RBP12.47□□□□□ -0.41
COL4A5-204ENST00000477429 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
COL4A5-204ENST00000477429 TTF2Q9UNY4 1162 aaKnown RBP12.47□□□□□ -0.41
COL4A5-204ENST00000477429 IQSEC3Q9UPP2 1182 aaPredicted RBP12.47□□□□□ -0.41
COL4A5-204ENST00000477429 ARAP2Q8WZ64 1704 aa12.46□□□□□ -0.41
COL4A5-204ENST00000477429 MYO1BO43795 1136 aa12.46□□□□□ -0.41
COL4A5-204ENST00000477429 CRKP46108 304 aa12.46□□□□□ -0.41
COL4A5-204ENST00000477429 IFIT5Q13325 482 aaKnown RBP12.46□□□□□ -0.41
COL4A5-204ENST00000477429 SLC4A8Q2Y0W8 1093 aa12.46□□□□□ -0.41
COL4A5-204ENST00000477429 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
COL4A5-204ENST00000477429 ZFYVE28Q9HCC9 887 aa12.46□□□□□ -0.41
COL4A5-204ENST00000477429 SPDYE5A6NIY4 337 aa12.45□□□□□ -0.42
COL4A5-204ENST00000477429 IRF6O14896 467 aa12.45□□□□□ -0.42
COL4A5-204ENST00000477429 VAMP4O75379 141 aa12.45□□□□□ -0.42
COL4A5-204ENST00000477429 GTF2A2P52657 109 aa12.45□□□□□ -0.42
COL4A5-204ENST00000477429 LACTBP83111 547 aaPredicted RBP12.45□□□□□ -0.42
COL4A5-204ENST00000477429 LDHAL6AQ6ZMR3 332 aa12.45□□□□□ -0.42
COL4A5-204ENST00000477429 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
COL4A5-204ENST00000477429 SERPINA10Q9UK55 444 aa12.45□□□□□ -0.42
COL4A5-204ENST00000477429 SYNGAP1Q96PV0 1343 aa12.44□□□□□ -0.42
COL4A5-204ENST00000477429 FANCIQ9NVI1 1328 aa12.44□□□□□ -0.42
COL4A5-204ENST00000477429 TLR2O60603 784 aa12.44□□□□□ -0.42
COL4A5-204ENST00000477429 MAP3K12Q12852 859 aa12.44□□□□□ -0.42
COL4A5-204ENST00000477429 MOGSQ13724 837 aa12.44□□□□□ -0.42
COL4A5-204ENST00000477429 UBE2Q1Q7Z7E8 422 aa12.44□□□□□ -0.42
COL4A5-204ENST00000477429 TRIM47Q96LD4 638 aa12.44□□□□□ -0.42
COL4A5-204ENST00000477429 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
COL4A5-204ENST00000477429 CPA4Q9UI42 421 aa12.44□□□□□ -0.42
COL4A5-204ENST00000477429 ADGRA2Q96PE1 1338 aa12.43□□□□□ -0.42
COL4A5-204ENST00000477429 TMEM265A0A087WTH1 108 aa12.43□□□□□ -0.42
COL4A5-204ENST00000477429 A0A1W2PPC1 479 aa12.43□□□□□ -0.42
COL4A5-204ENST00000477429 HIBADHP31937 336 aaKnown RBP12.43□□□□□ -0.42
COL4A5-204ENST00000477429 C17orf99Q6UX52 265 aa12.43□□□□□ -0.42
COL4A5-204ENST00000477429 SUCLG2Q96I99 432 aa12.43□□□□□ -0.42
COL4A5-204ENST00000477429 INPP5BP32019 993 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms