RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 TMEM57Q8N5G2 664 aa28.14■■■□□ 2.1
CNIH4-208ENST00000477413 TNFAIP1Q13829 316 aa28.13■■■□□ 2.09
CNIH4-208ENST00000477413 LDLRAD1Q5T700 205 aa28.13■■■□□ 2.09
CNIH4-208ENST00000477413 MOB2Q70IA6 237 aa28.13■■■□□ 2.09
CNIH4-208ENST00000477413 CLUAP1Q96AJ1 413 aa28.13■■■□□ 2.09
CNIH4-208ENST00000477413 CLRN2A0PK11 232 aa28.12■■■□□ 2.09
CNIH4-208ENST00000477413 UNCXA6NJT0 531 aa28.12■■■□□ 2.09
CNIH4-208ENST00000477413 SEMA3EO15041 775 aa28.12■■■□□ 2.09
CNIH4-208ENST00000477413 FRAT2O75474 233 aaPredicted RBP28.12■■■□□ 2.09
CNIH4-208ENST00000477413 KIF23Q02241 960 aaPredicted RBP28.12■■■□□ 2.09
CNIH4-208ENST00000477413 CHAF1AQ13111 956 aaPredicted RBP28.12■■■□□ 2.09
CNIH4-208ENST00000477413 ARMC9Q7Z3E5 817 aa28.12■■■□□ 2.09
CNIH4-208ENST00000477413 WDR66Q8TBY9 1149 aa28.12■■■□□ 2.09
CNIH4-208ENST00000477413 SALL1Q9NSC2 1324 aa28.12■■■□□ 2.09
CNIH4-208ENST00000477413 RBM5P52756 815 aaKnown RBP eCLIP28.11■■■□□ 2.09
CNIH4-208ENST00000477413 ZDHHC15Q96MV8 337 aa28.11■■■□□ 2.09
CNIH4-208ENST00000477413 ZNF70Q9UC06 446 aaPredicted RBP28.11■■■□□ 2.09
CNIH4-208ENST00000477413 OTOFQ9HC10 1997 aa28.11■■■□□ 2.09
CNIH4-208ENST00000477413 PDS5AQ29RF7 1337 aaKnown RBP28.11■■■□□ 2.09
CNIH4-208ENST00000477413 UBE2Q2LH0YL09 131 aa28.1■■■□□ 2.09
CNIH4-208ENST00000477413 TEKT1Q969V4 418 aa28.1■■■□□ 2.09
CNIH4-208ENST00000477413 VEZTQ9HBM0 779 aa28.09■■■□□ 2.09
CNIH4-208ENST00000477413 RASA3Q14644 834 aa28.08■■■□□ 2.09
CNIH4-208ENST00000477413 SUPT20HL1Q3ZLR7 823 aa28.08■■■□□ 2.09
CNIH4-208ENST00000477413 HHIPL2Q6UWX4 724 aa28.08■■■□□ 2.09
CNIH4-208ENST00000477413 CSRNP1Q96S65 589 aa28.08■■■□□ 2.09
CNIH4-208ENST00000477413 GNL3LQ9NVN8 582 aaKnown RBP28.08■■■□□ 2.09
CNIH4-208ENST00000477413 TTLL12Q14166 644 aaPredicted RBP28.07■■■□□ 2.08
CNIH4-208ENST00000477413 FKBP1CQ5VVH2 108 aa28.07■■■□□ 2.08
CNIH4-208ENST00000477413 TDRD3Q9H7E2 651 aaKnown RBP28.07■■■□□ 2.08
CNIH4-208ENST00000477413 PNMA6EA0A0J9YXQ4 647 aa28.06■■■□□ 2.08
CNIH4-208ENST00000477413 RLBP1P12271 317 aa28.06■■■□□ 2.08
CNIH4-208ENST00000477413 PHKA1P46020 1223 aa28.06■■■□□ 2.08
CNIH4-208ENST00000477413 POLA2Q14181 598 aa28.06■■■□□ 2.08
CNIH4-208ENST00000477413 FTSJ3Q8IY81 847 aaKnown RBP28.06■■■□□ 2.08
CNIH4-208ENST00000477413 TEPSINQ96N21 525 aa28.06■■■□□ 2.08
CNIH4-208ENST00000477413 AKAP2Q9Y2D5 859 aa28.06■■■□□ 2.08
CNIH4-208ENST00000477413 RPAP1Q9BWH6 1393 aaPredicted RBP28.06■■■□□ 2.08
CNIH4-208ENST00000477413 PPP1R12BO60237 982 aaPredicted RBP28.05■■■□□ 2.08
CNIH4-208ENST00000477413 APOBEC3HQ6NTF7 200 aaKnown RBP28.05■■■□□ 2.08
CNIH4-208ENST00000477413 DENND2AQ9ULE3 1009 aa28.05■■■□□ 2.08
CNIH4-208ENST00000477413 ANGEL1Q9UNK9 670 aaKnown RBP28.05■■■□□ 2.08
CNIH4-208ENST00000477413 CASP8AP2Q9UKL3 1982 aa28.04■■■□□ 2.08
CNIH4-208ENST00000477413 NBPF12Q5TAG4 269 aaPredicted RBP28.04■■■□□ 2.08
CNIH4-208ENST00000477413 CCDC102BQ68D86 513 aa28.04■■■□□ 2.08
CNIH4-208ENST00000477413 TSKSQ9UJT2 592 aa28.04■■■□□ 2.08
CNIH4-208ENST00000477413 A0A1B0GUL7 405 aa28.03■■■□□ 2.08
CNIH4-208ENST00000477413 ADORA1P30542 326 aa28.03■■■□□ 2.08
CNIH4-208ENST00000477413 TFCP2Q12800 502 aa28.03■■■□□ 2.08
CNIH4-208ENST00000477413 SSH3Q8TE77 659 aa28.03■■■□□ 2.08
CNIH4-208ENST00000477413 RNF186Q9NXI6 227 aa28.03■■■□□ 2.08
CNIH4-208ENST00000477413 ZBTB7BO15156 539 aaPredicted RBP28.02■■■□□ 2.08
CNIH4-208ENST00000477413 TM4SF4P48230 202 aa28.02■■■□□ 2.08
CNIH4-208ENST00000477413 TNNI2P48788 182 aa28.02■■■□□ 2.08
CNIH4-208ENST00000477413 FAM83AQ86UY5 434 aa28.02■■■□□ 2.08
CNIH4-208ENST00000477413 PRDX5P30044 214 aa28.01■■■□□ 2.07
CNIH4-208ENST00000477413 RASGRF1Q13972 1273 aa28.01■■■□□ 2.07
CNIH4-208ENST00000477413 MVPQ14764 893 aaKnown RBP28.01■■■□□ 2.07
CNIH4-208ENST00000477413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.01■■■□□ 2.07
CNIH4-208ENST00000477413 MYH2Q9UKX2 1941 aa28■■■□□ 2.07
CNIH4-208ENST00000477413 ZBTB48P10074 688 aaPredicted RBP28■■■□□ 2.07
CNIH4-208ENST00000477413 SPRYD7Q5W111 196 aa28■■■□□ 2.07
CNIH4-208ENST00000477413 ZGPATQ8N5A5 531 aaKnown RBP28■■■□□ 2.07
CNIH4-208ENST00000477413 USP2O75604 605 aaPredicted RBP27.99■■■□□ 2.07
CNIH4-208ENST00000477413 IREB2P48200 963 aaKnown RBP27.99■■■□□ 2.07
CNIH4-208ENST00000477413 TIMM10P62072 90 aa27.99■■■□□ 2.07
CNIH4-208ENST00000477413 ATP8B2P98198 1209 aa27.99■■■□□ 2.07
CNIH4-208ENST00000477413 PRKG1Q13976 671 aa27.99■■■□□ 2.07
CNIH4-208ENST00000477413 ITPRIPQ8IWB1 547 aa27.99■■■□□ 2.07
CNIH4-208ENST00000477413 XAGE2Q96GT9 111 aa27.99■■■□□ 2.07
CNIH4-208ENST00000477413 CFHR5Q9BXR6 569 aa27.99■■■□□ 2.07
CNIH4-208ENST00000477413 FZD1Q9UP38 647 aa27.99■■■□□ 2.07
CNIH4-208ENST00000477413 TCP10L2B9ZVM9 353 aa27.98■■■□□ 2.07
CNIH4-208ENST00000477413 LDHBP07195 334 aaKnown RBP27.98■■■□□ 2.07
CNIH4-208ENST00000477413 SREBF2Q12772 1141 aa27.98■■■□□ 2.07
CNIH4-208ENST00000477413 TMEM39BQ9GZU3 492 aa27.98■■■□□ 2.07
CNIH4-208ENST00000477413 GPR108Q9NPR9 543 aa27.98■■■□□ 2.07
CNIH4-208ENST00000477413 TMOD2Q9NZR1 351 aa27.98■■■□□ 2.07
CNIH4-208ENST00000477413 DAGLAQ9Y4D2 1042 aa27.98■■■□□ 2.07
CNIH4-208ENST00000477413 NOM1Q5C9Z4 860 aaKnown RBP27.97■■■□□ 2.07
CNIH4-208ENST00000477413 CDAN1Q8IWY9 1227 aa27.97■■■□□ 2.07
CNIH4-208ENST00000477413 ANKRD13AQ8IZ07 590 aa27.97■■■□□ 2.07
CNIH4-208ENST00000477413 GAKO14976 1311 aa27.96■■■□□ 2.07
CNIH4-208ENST00000477413 TRPA1O75762 1119 aa27.96■■■□□ 2.07
CNIH4-208ENST00000477413 G3BP1Q13283 466 aaKnown RBP eCLIP27.96■■■□□ 2.07
CNIH4-208ENST00000477413 CLMNQ96JQ2 1002 aa27.96■■■□□ 2.07
CNIH4-208ENST00000477413 NOP58Q9Y2X3 529 aaKnown RBP27.96■■■□□ 2.07
CNIH4-208ENST00000477413 RFX7Q2KHR2 1363 aa27.96■■■□□ 2.07
CNIH4-208ENST00000477413 ARID4AP29374 1257 aaPredicted RBP27.95■■■□□ 2.06
CNIH4-208ENST00000477413 WNK4Q96J92 1243 aa27.95■■■□□ 2.06
CNIH4-208ENST00000477413 MS4A1P11836 297 aa27.94■■■□□ 2.06
CNIH4-208ENST00000477413 DIXDC1Q155Q3 683 aa27.94■■■□□ 2.06
CNIH4-208ENST00000477413 SLC10A4Q96EP9 437 aa27.94■■■□□ 2.06
CNIH4-208ENST00000477413 MANSC4A6NHS7 340 aaPredicted RBP27.93■■■□□ 2.06
CNIH4-208ENST00000477413 CACNB3P54284 484 aa27.93■■■□□ 2.06
CNIH4-208ENST00000477413 INHBEP58166 350 aa27.93■■■□□ 2.06
CNIH4-208ENST00000477413 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.93■■■□□ 2.06
CNIH4-208ENST00000477413 HOOK2Q96ED9 719 aa27.93■■■□□ 2.06
CNIH4-208ENST00000477413 FAM163AQ96GL9 167 aaPredicted RBP27.93■■■□□ 2.06
CNIH4-208ENST00000477413 MAST2Q6P0Q8 1798 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms