RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 TTLL5Q6EMB2 1281 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 CCDC129Q6ZRS4 1044 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 ZNF589Q86UQ0 364 aaPredicted RBP11.24□□□□□ -0.61
PGK1-204ENST00000477335 NIM1KQ8IY84 436 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 MAGEB6Q8N7X4 407 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 WDR66Q8TBY9 1149 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 ESYT1Q9BSJ8 1104 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 BACH2Q9BYV9 841 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 ZNRF3Q9ULT6 936 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 ZNF541Q9H0D2 1346 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 ZNF532Q9HCE3 1301 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 UTRNP46939 3433 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 MAST2Q6P0Q8 1798 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 SBF1O95248 1867 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 USP17L3A6NCW0 530 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 USP17L4A6NCW7 530 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 CXCL9Q07325 125 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 SLC9C2Q5TAH2 1124 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 STRIP1Q5VSL9 837 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 CWC27Q6UX04 472 aaKnown RBP11.23□□□□□ -0.61
PGK1-204ENST00000477335 USP17L1Q7RTZ2 530 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 NSUN4Q96CB9 384 aaKnown RBP11.23□□□□□ -0.61
PGK1-204ENST00000477335 PUS7LQ9H0K6 701 aaKnown RBP11.23□□□□□ -0.61
PGK1-204ENST00000477335 RAI14Q9P0K7 980 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 LRP2BPQ9P2M1 347 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 MAST3O60307 1309 aa11.23□□□□□ -0.61
PGK1-204ENST00000477335 SHTN1A0MZ66 631 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 FZD9O00144 591 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 FOXP2O15409 715 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 SGSM2O43147 1006 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 VIL1P09327 827 aaKnown RBP11.22□□□□□ -0.61
PGK1-204ENST00000477335 MYH7P12883 1935 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 LMNB1P20700 586 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 DIXDC1Q155Q3 683 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 GPR162Q16538 588 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 CCDC88AQ3V6T2 1871 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 ERICH6Q7L0X2 663 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 GMLQ99445 158 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 DIAPH3Q9NSV4 1193 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 PCDHAC2Q9Y5I4 1007 aa11.22□□□□□ -0.61
PGK1-204ENST00000477335 TIAM2Q8IVF5 1701 aa11.21□□□□□ -0.61
PGK1-204ENST00000477335 F8W031 263 aaPredicted RBP11.21□□□□□ -0.61
PGK1-204ENST00000477335 LDHBP07195 334 aaKnown RBP11.21□□□□□ -0.61
PGK1-204ENST00000477335 CYP7A1P22680 504 aa11.21□□□□□ -0.61
PGK1-204ENST00000477335 FKBP1AP62942 108 aaKnown RBP11.21□□□□□ -0.61
PGK1-204ENST00000477335 DYNLL1P63167 89 aaKnown RBP11.21□□□□□ -0.61
PGK1-204ENST00000477335 MAP3K12Q12852 859 aa11.21□□□□□ -0.61
PGK1-204ENST00000477335 UBE3CQ15386 1083 aa11.21□□□□□ -0.61
PGK1-204ENST00000477335 C9orf131Q5VYM1 1079 aa11.21□□□□□ -0.61
PGK1-204ENST00000477335 RSBN1LQ6PCB5 846 aaPredicted RBP11.21□□□□□ -0.61
PGK1-204ENST00000477335 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
PGK1-204ENST00000477335 TBC1D22AQ8WUA7 517 aa11.21□□□□□ -0.61
PGK1-204ENST00000477335 APPBP2Q92624 585 aa11.21□□□□□ -0.61
PGK1-204ENST00000477335 DICER1Q9UPY3 1922 aaKnown RBP11.2□□□□□ -0.62
PGK1-204ENST00000477335 SCNN1DP51172 638 aa11.2□□□□□ -0.62
PGK1-204ENST00000477335 PTH1RQ03431 593 aa11.2□□□□□ -0.62
PGK1-204ENST00000477335 VPS53Q5VIR6 699 aa11.2□□□□□ -0.62
PGK1-204ENST00000477335 CIAPIN1Q6FI81 312 aa11.2□□□□□ -0.62
PGK1-204ENST00000477335 KIAA0825Q8IV33 1275 aa11.2□□□□□ -0.62
PGK1-204ENST00000477335 LCORLQ8N3X6 602 aa11.2□□□□□ -0.62
PGK1-204ENST00000477335 ZGPATQ8N5A5 531 aaKnown RBP11.2□□□□□ -0.62
PGK1-204ENST00000477335 MIGA1Q8NAN2 632 aa11.2□□□□□ -0.62
PGK1-204ENST00000477335 JDP2Q8WYK2 163 aa11.2□□□□□ -0.62
PGK1-204ENST00000477335 RIOK1Q9BRS2 568 aaKnown RBP11.2□□□□□ -0.62
PGK1-204ENST00000477335 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.2□□□□□ -0.625e-9■■■□□ 15.7
PGK1-204ENST00000477335 LSG1Q9H089 658 aaKnown RBP11.2□□□□□ -0.62
PGK1-204ENST00000477335 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
PGK1-204ENST00000477335 GAKO14976 1311 aa11.19□□□□□ -0.62
PGK1-204ENST00000477335 HIP1O00291 1037 aa11.19□□□□□ -0.62
PGK1-204ENST00000477335 MBD4O95243 580 aa11.19□□□□□ -0.62
PGK1-204ENST00000477335 ZFYP08048 801 aaPredicted RBP11.19□□□□□ -0.62
PGK1-204ENST00000477335 MFAP1P55081 439 aaKnown RBP11.19□□□□□ -0.62
PGK1-204ENST00000477335 MCMDC2Q4G0Z9 681 aa11.19□□□□□ -0.62
PGK1-204ENST00000477335 SPTY2D1Q68D10 685 aaPredicted RBP11.19□□□□□ -0.62
PGK1-204ENST00000477335 NAA16Q6N069 864 aaPredicted RBP11.19□□□□□ -0.62
PGK1-204ENST00000477335 TICAM2Q86XR7 235 aa11.19□□□□□ -0.62
PGK1-204ENST00000477335 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
PGK1-204ENST00000477335 ARMT1Q9H993 441 aa11.19□□□□□ -0.62
PGK1-204ENST00000477335 HELLSQ9NRZ9 838 aa11.19□□□□□ -0.62
PGK1-204ENST00000477335 TTF2Q9UNY4 1162 aaKnown RBP11.19□□□□□ -0.62
PGK1-204ENST00000477335 DAGLAQ9Y4D2 1042 aa11.19□□□□□ -0.62
PGK1-204ENST00000477335 MROH7-TTC4A0A0A0MT08 1334 aa11.18□□□□□ -0.62
PGK1-204ENST00000477335 CCDC171Q6TFL3 1326 aa11.18□□□□□ -0.62
PGK1-204ENST00000477335 RAD50Q92878 1312 aa11.18□□□□□ -0.62
PGK1-204ENST00000477335 GPAA1O43292 621 aa11.18□□□□□ -0.62
PGK1-204ENST00000477335 PRKAB2O43741 272 aa11.18□□□□□ -0.62
PGK1-204ENST00000477335 ZSCAN25Q6NSZ9 544 aa11.18□□□□□ -0.62
PGK1-204ENST00000477335 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
PGK1-204ENST00000477335 STRBPQ96SI9 672 aaKnown RBP11.18□□□□□ -0.62
PGK1-204ENST00000477335 EPB41L4AQ9HCS5 686 aaPredicted RBP11.18□□□□□ -0.62
PGK1-204ENST00000477335 SUGT1Q9Y2Z0 365 aa11.18□□□□□ -0.62
PGK1-204ENST00000477335 GRIN3BO60391 1043 aa11.17□□□□□ -0.62
PGK1-204ENST00000477335 BTDP43251 543 aa11.17□□□□□ -0.62
PGK1-204ENST00000477335 CRKP46108 304 aa11.17□□□□□ -0.62
PGK1-204ENST00000477335 GMPSP49915 693 aaPredicted RBP11.17□□□□□ -0.62
PGK1-204ENST00000477335 RHBDL3P58872 404 aa11.17□□□□□ -0.62
PGK1-204ENST00000477335 APOBEC3HQ6NTF7 200 aaKnown RBP11.17□□□□□ -0.62
PGK1-204ENST00000477335 CASC1Q6TDU7 716 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms