RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 DZIP1LQ8IYY4 767 aaKnown RBP26.57■■□□□ 1.84
LIMK1-204ENST00000476792 ZNF70Q9UC06 446 aaPredicted RBP26.57■■□□□ 1.84
LIMK1-204ENST00000476792 ECM29Q5VYK3 1845 aa26.56■■□□□ 1.84
LIMK1-204ENST00000476792 MKRN3Q13064 507 aaKnown RBP26.55■■□□□ 1.84
LIMK1-204ENST00000476792 RASA3Q14644 834 aa26.55■■□□□ 1.84
LIMK1-204ENST00000476792 SPDYE2Q495Y8 402 aa26.55■■□□□ 1.84
LIMK1-204ENST00000476792 CSRNP1Q96S65 589 aa26.55■■□□□ 1.84
LIMK1-204ENST00000476792 PPP2R3BQ9Y5P8 575 aa26.55■■□□□ 1.84
LIMK1-204ENST00000476792 COL1A1P02452 1464 aaPredicted RBP26.55■■□□□ 1.84
LIMK1-204ENST00000476792 ARAP2Q8WZ64 1704 aa26.54■■□□□ 1.84
LIMK1-204ENST00000476792 FTSJ3Q8IY81 847 aaKnown RBP26.54■■□□□ 1.84
LIMK1-204ENST00000476792 TCP10L2B9ZVM9 353 aa26.53■■□□□ 1.84
LIMK1-204ENST00000476792 ADORA1P30542 326 aa26.53■■□□□ 1.84
LIMK1-204ENST00000476792 MTX1Q13505 466 aa26.53■■□□□ 1.84
LIMK1-204ENST00000476792 NBPF12Q5TAG4 269 aaPredicted RBP26.53■■□□□ 1.84
LIMK1-204ENST00000476792 TEKT1Q969V4 418 aa26.53■■□□□ 1.84
LIMK1-204ENST00000476792 GNL3LQ9NVN8 582 aaKnown RBP26.53■■□□□ 1.84
LIMK1-204ENST00000476792 TRPA1O75762 1119 aa26.52■■□□□ 1.84
LIMK1-204ENST00000476792 PHKA1P46020 1223 aa26.52■■□□□ 1.84
LIMK1-204ENST00000476792 TFCP2Q12800 502 aa26.52■■□□□ 1.84
LIMK1-204ENST00000476792 SUPT20HL1Q3ZLR7 823 aa26.52■■□□□ 1.84
LIMK1-204ENST00000476792 WDR66Q8TBY9 1149 aa26.52■■□□□ 1.84
LIMK1-204ENST00000476792 PNMA6EA0A0J9YXQ4 647 aa26.51■■□□□ 1.83
LIMK1-204ENST00000476792 PPP1R12BO60237 982 aaPredicted RBP26.51■■□□□ 1.83
LIMK1-204ENST00000476792 TIMM10P62072 90 aa26.51■■□□□ 1.83
LIMK1-204ENST00000476792 HDLBPQ00341 1268 aaKnown RBP26.51■■□□□ 1.83
LIMK1-204ENST00000476792 TNFAIP1Q13829 316 aa26.51■■□□□ 1.83
LIMK1-204ENST00000476792 RNF186Q9NXI6 227 aa26.51■■□□□ 1.83
LIMK1-204ENST00000476792 CACNB3P54284 484 aa26.5■■□□□ 1.83
LIMK1-204ENST00000476792 ITPRIPQ8IWB1 547 aa26.5■■□□□ 1.83
LIMK1-204ENST00000476792 SSC5DA1L4H1 1573 aa26.5■■□□□ 1.83
LIMK1-204ENST00000476792 CASP8AP2Q9UKL3 1982 aa26.49■■□□□ 1.83
LIMK1-204ENST00000476792 MYH13Q9UKX3 1938 aa26.49■■□□□ 1.83
LIMK1-204ENST00000476792 MAST3O60307 1309 aa26.49■■□□□ 1.83
LIMK1-204ENST00000476792 RLBP1P12271 317 aa26.49■■□□□ 1.83
LIMK1-204ENST00000476792 LDLRAD1Q5T700 205 aa26.49■■□□□ 1.83
LIMK1-204ENST00000476792 C1orf115Q9H7X2 142 aa26.49■■□□□ 1.83
LIMK1-204ENST00000476792 SUGT1Q9Y2Z0 365 aa26.49■■□□□ 1.83
LIMK1-204ENST00000476792 CCDC102BQ68D86 513 aa26.48■■□□□ 1.83
LIMK1-204ENST00000476792 CDAN1Q8IWY9 1227 aa26.48■■□□□ 1.83
LIMK1-204ENST00000476792 SLC10A4Q96EP9 437 aa26.48■■□□□ 1.83
LIMK1-204ENST00000476792 AKAP11Q9UKA4 1901 aa26.47■■□□□ 1.83
LIMK1-204ENST00000476792 A0A1B0GUL7 405 aa26.47■■□□□ 1.83
LIMK1-204ENST00000476792 TNNI2P48788 182 aa26.47■■□□□ 1.83
LIMK1-204ENST00000476792 G3BP1Q13283 466 aaKnown RBP eCLIP26.47■■□□□ 1.83
LIMK1-204ENST00000476792 CLMNQ96JQ2 1002 aa26.47■■□□□ 1.83
LIMK1-204ENST00000476792 ZDHHC15Q96MV8 337 aa26.47■■□□□ 1.83
LIMK1-204ENST00000476792 NEUROD6Q96NK8 337 aa26.47■■□□□ 1.83
LIMK1-204ENST00000476792 TMEM39BQ9GZU3 492 aa26.47■■□□□ 1.83
LIMK1-204ENST00000476792 DENND2AQ9ULE3 1009 aa26.47■■□□□ 1.83
LIMK1-204ENST00000476792 AKAP2Q9Y2D5 859 aa26.47■■□□□ 1.83
LIMK1-204ENST00000476792 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.47■■□□□ 1.83
LIMK1-204ENST00000476792 REM2Q8IYK8 340 aaPredicted RBP26.46■■□□□ 1.83
LIMK1-204ENST00000476792 XAGE2Q96GT9 111 aa26.46■■□□□ 1.83
LIMK1-204ENST00000476792 SAGE1Q9NXZ1 904 aa26.46■■□□□ 1.83
LIMK1-204ENST00000476792 TMOD2Q9NZR1 351 aa26.46■■□□□ 1.83
LIMK1-204ENST00000476792 USP2O75604 605 aaPredicted RBP26.45■■□□□ 1.82
LIMK1-204ENST00000476792 PRDX5P30044 214 aa26.45■■□□□ 1.82
LIMK1-204ENST00000476792 IREB2P48200 963 aaKnown RBP26.45■■□□□ 1.82
LIMK1-204ENST00000476792 DIXDC1Q155Q3 683 aa26.45■■□□□ 1.82
LIMK1-204ENST00000476792 APOBEC3HQ6NTF7 200 aaKnown RBP26.45■■□□□ 1.82
LIMK1-204ENST00000476792 MRIQ9BWK5 157 aa26.45■■□□□ 1.82
LIMK1-204ENST00000476792 SEMA3EO15041 775 aa26.44■■□□□ 1.82
LIMK1-204ENST00000476792 LDHBP07195 334 aaKnown RBP26.44■■□□□ 1.82
LIMK1-204ENST00000476792 MAP3K11Q16584 847 aa26.44■■□□□ 1.82
LIMK1-204ENST00000476792 SPRYD7Q5W111 196 aa26.44■■□□□ 1.82
LIMK1-204ENST00000476792 HHIPL2Q6UWX4 724 aa26.44■■□□□ 1.82
LIMK1-204ENST00000476792 TEPSINQ96N21 525 aa26.44■■□□□ 1.82
LIMK1-204ENST00000476792 PANK1Q8TE04 598 aa26.43■■□□□ 1.82
LIMK1-204ENST00000476792 ATP8B2P98198 1209 aa26.42■■□□□ 1.82
LIMK1-204ENST00000476792 RASGRF1Q13972 1273 aa26.42■■□□□ 1.82
LIMK1-204ENST00000476792 GORABQ5T7V8 394 aa26.42■■□□□ 1.82
LIMK1-204ENST00000476792 DAGLAQ9Y4D2 1042 aa26.42■■□□□ 1.82
LIMK1-204ENST00000476792 ZBTB7BO15156 539 aaPredicted RBP26.41■■□□□ 1.82
LIMK1-204ENST00000476792 OS9Q13438 667 aaPredicted RBP26.41■■□□□ 1.82
LIMK1-204ENST00000476792 MVPQ14764 893 aaKnown RBP26.41■■□□□ 1.82
LIMK1-204ENST00000476792 ABHD8Q96I13 439 aa26.4■■□□□ 1.82
LIMK1-204ENST00000476792 WNK4Q96J92 1243 aa26.4■■□□□ 1.82
LIMK1-204ENST00000476792 ABCF2Q9UG63 623 aa26.4■■□□□ 1.82
LIMK1-204ENST00000476792 SALL1Q9NSC2 1324 aa26.39■■□□□ 1.82
LIMK1-204ENST00000476792 TBC1D8O95759 1140 aa26.39■■□□□ 1.82
LIMK1-204ENST00000476792 TM4SF4P48230 202 aa26.39■■□□□ 1.82
LIMK1-204ENST00000476792 SREBF2Q12772 1141 aa26.39■■□□□ 1.82
LIMK1-204ENST00000476792 POLA2Q14181 598 aa26.39■■□□□ 1.82
LIMK1-204ENST00000476792 ANKRD13AQ8IZ07 590 aa26.39■■□□□ 1.82
LIMK1-204ENST00000476792 ELP3Q9H9T3 547 aa26.39■■□□□ 1.82
LIMK1-204ENST00000476792 SURF6O75683 361 aaKnown RBP26.38■■□□□ 1.81
LIMK1-204ENST00000476792 CDC42EP5Q6NZY7 148 aa26.38■■□□□ 1.81
LIMK1-204ENST00000476792 ZGPATQ8N5A5 531 aaKnown RBP26.38■■□□□ 1.81
LIMK1-204ENST00000476792 SSH3Q8TE77 659 aa26.38■■□□□ 1.81
LIMK1-204ENST00000476792 DGKZQ13574 1117 aa26.37■■□□□ 1.81
LIMK1-204ENST00000476792 MCOLN1Q9GZU1 580 aa26.37■■□□□ 1.81
LIMK1-204ENST00000476792 UNCXA6NJT0 531 aa26.36■■□□□ 1.81
LIMK1-204ENST00000476792 TCP10Q12799 353 aa26.36■■□□□ 1.81
LIMK1-204ENST00000476792 FKBP1CQ5VVH2 108 aa26.36■■□□□ 1.81
LIMK1-204ENST00000476792 FAM83AQ86UY5 434 aa26.36■■□□□ 1.81
LIMK1-204ENST00000476792 DZIP1Q86YF9 867 aaKnown RBP26.36■■□□□ 1.81
LIMK1-204ENST00000476792 USP40Q9NVE5 1235 aa26.36■■□□□ 1.81
LIMK1-204ENST00000476792 MANSC4A6NHS7 340 aaPredicted RBP26.35■■□□□ 1.81
LIMK1-204ENST00000476792 ZBTB48P10074 688 aaPredicted RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms