RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 ENAMQ9NRM1 1142 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 SGTAO43765 313 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 FOXD2O60548 495 aaPredicted RBP6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 RPN1P04843 607 aaKnown RBP6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 PDGFRBP09619 1106 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 MAP2K2P36507 400 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 MMP16P51512 607 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 SLMAPQ14BN4 828 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 PARP10Q53GL7 1025 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 RSBN1LQ6PCB5 846 aaPredicted RBP6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 RETREG3Q86VR2 466 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 GIMAP8Q8ND71 665 aaPredicted RBP6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 GSDMBQ8TAX9 411 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 PBXIP1Q96AQ6 731 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 ASIC4Q96FT7 647 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 C1orf74Q96LT6 269 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 XPO7Q9UIA9 1087 aaKnown RBP6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 JRKLQ9Y4A0 524 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 PCDHB15Q9Y5E8 787 aa6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 MORC2Q9Y6X9 1032 aaPredicted RBP6.95□□□□□ -1.3
SPTLC3-205ENST00000476791 HSP90AB1P08238 724 aaKnown RBP6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 VIL1P09327 827 aaKnown RBP6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 RPS6KA3P51812 740 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 PDE4BQ07343 736 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 DIXDC1Q155Q3 683 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 SLC5A9Q2M3M2 681 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 CCDC24Q8N4L8 307 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 DRAXINQ8NBI3 349 aaPredicted RBP6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 TSC1Q92574 1164 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 GLMNQ92990 594 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 RNPC3Q96LT9 517 aaKnown RBP6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 C6orf203Q9P0P8 240 aaPredicted RBP6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 CFAP45Q9UL16 551 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 EIF4G1Q04637 1599 aaKnown RBP6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 DXOO77932 396 aaKnown RBP6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 BPNT1O95861 308 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 SLFN14P0C7P3 912 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 MAGEA10P43363 369 aaPredicted RBP6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 LDLRAD1Q5T700 205 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 ZNF697Q5TEC3 545 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 CDCA2Q69YH5 1023 aaPredicted RBP6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 MIGA1Q8NAN2 632 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 WDR66Q8TBY9 1149 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 TBC1D5Q92609 795 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 ZNF496Q96IT1 587 aaPredicted RBP6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 GSDMAQ96QA5 445 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 BACH2Q9BYV9 841 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 VRTNQ9H8Y1 702 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 R3HCC1Q9Y3T6 440 aaKnown RBP6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 EID1Q9Y6B2 187 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 SMARCA2P51531 1590 aa6.94□□□□□ -1.3
SPTLC3-205ENST00000476791 LRRC10BA6NIK2 292 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 RASA4BC9J798 803 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 AKR1B10O60218 316 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 VAMP4O75379 141 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 PYGLP06737 847 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 BTF3P20290 206 aaKnown RBP6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 TPP2P29144 1249 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 TNNI2P48788 182 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 SH3BGRP55822 239 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 EIF2B5Q13144 721 aaKnown RBP6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 BIRC3Q13489 604 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 MTMR2Q13614 643 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 MYBPC3Q14896 1274 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 SMUG1Q53HV7 270 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 RIC3Q7Z5B4 369 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 MILR1Q7Z6M3 343 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 ZNF598Q86UK7 904 aaKnown RBP6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 ANKRD18AQ8IVF6 992 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 STON2Q8WXE9 905 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 PAWRQ96IZ0 340 aaKnown RBP6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 GBP4Q96PP9 640 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 TINF2Q9BSI4 451 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 PANK2Q9BZ23 570 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 CLIP2Q9UDT6 1046 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 BARX2Q9UMQ3 279 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 ATP2B1P20020 1258 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 KIF11P52732 1056 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 UBASH3AP57075 661 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 TMED1Q13445 227 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 INO80DQ53TQ3 878 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 ACBD5Q5T8D3 534 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 OLFML1Q6UWY5 402 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 SLC7A5P1Q8MH63 180 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 THEMISQ8N1K5 641 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 ARL6IP6Q8N6S5 226 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 SYAP1Q96A49 352 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 TRPV5Q9NQA5 729 aa6.93□□□□□ -1.3
SPTLC3-205ENST00000476791 ZBTB24O43167 697 aaPredicted RBP6.92□□□□□ -1.3
SPTLC3-205ENST00000476791 CCDC159P0C7I6 412 aa6.92□□□□□ -1.3
SPTLC3-205ENST00000476791 MSL3P1P0C860 447 aa6.92□□□□□ -1.3
SPTLC3-205ENST00000476791 JUNDP17535 347 aa6.92□□□□□ -1.3
SPTLC3-205ENST00000476791 RPL17P18621 184 aaKnown RBP6.92□□□□□ -1.3
SPTLC3-205ENST00000476791 RWDD2BP57060 319 aa6.92□□□□□ -1.3
SPTLC3-205ENST00000476791 SNX16P57768 344 aa6.92□□□□□ -1.3
SPTLC3-205ENST00000476791 PPP2R5CQ13362 524 aa6.92□□□□□ -1.3
SPTLC3-205ENST00000476791 DCTN1Q14203 1278 aa6.92□□□□□ -1.3
SPTLC3-205ENST00000476791 EIF4A2Q14240 407 aaKnown RBP6.92□□□□□ -1.3
SPTLC3-205ENST00000476791 C10orf76Q5T2E6 689 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms