RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TNMDQ9H2S6 317 aa19.31■□□□□ 0.68
TMEM53-208ENST00000476724 PDE8BO95263 885 aa19.31■□□□□ 0.68
TMEM53-208ENST00000476724 CTDNEP1O95476 244 aa19.31■□□□□ 0.68
TMEM53-208ENST00000476724 DACT1Q9NYF0 836 aa19.31■□□□□ 0.68
TMEM53-208ENST00000476724 SALL1Q9NSC2 1324 aa19.31■□□□□ 0.68
TMEM53-208ENST00000476724 RTL9Q8NET4 1388 aa19.3■□□□□ 0.68
TMEM53-208ENST00000476724 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.3■□□□□ 0.68
TMEM53-208ENST00000476724 SLC27A3Q5K4L6 730 aa19.3■□□□□ 0.68
TMEM53-208ENST00000476724 CLSTN2Q9H4D0 955 aa19.3■□□□□ 0.68
TMEM53-208ENST00000476724 WDR19Q8NEZ3 1342 aa19.3■□□□□ 0.68
TMEM53-208ENST00000476724 MYH15Q9Y2K3 1946 aa19.3■□□□□ 0.68
TMEM53-208ENST00000476724 GTF2E1P29083 439 aaPredicted RBP19.29■□□□□ 0.68
TMEM53-208ENST00000476724 SCARF1Q14162 830 aa19.29■□□□□ 0.68
TMEM53-208ENST00000476724 FAM200AQ8TCP9 573 aa19.29■□□□□ 0.68
TMEM53-208ENST00000476724 SNAP23O00161 211 aa19.29■□□□□ 0.68
TMEM53-208ENST00000476724 DHX16O60231 1041 aaKnown RBP19.29■□□□□ 0.68
TMEM53-208ENST00000476724 FGAP02671 866 aa19.29■□□□□ 0.68
TMEM53-208ENST00000476724 TTLL5Q6EMB2 1281 aa19.29■□□□□ 0.68
TMEM53-208ENST00000476724 NBPF5PQ86XG9 351 aaPredicted RBP19.29■□□□□ 0.68
TMEM53-208ENST00000476724 BICD2Q8TD16 824 aa19.29■□□□□ 0.68
TMEM53-208ENST00000476724 PGBD1Q96JS3 809 aa19.29■□□□□ 0.68
TMEM53-208ENST00000476724 ZNF396Q96N95 335 aaPredicted RBP19.29■□□□□ 0.68
TMEM53-208ENST00000476724 MPHOSPH8Q99549 860 aa19.29■□□□□ 0.68
TMEM53-208ENST00000476724 AKAP11Q9UKA4 1901 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 RXRBP28702 533 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 CCT2P78371 535 aaKnown RBP19.28■□□□□ 0.68
TMEM53-208ENST00000476724 TXNRD1Q16881 649 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 NCOA7Q8NI08 942 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 RGS17Q9UGC6 210 aaPredicted RBP19.28■□□□□ 0.68
TMEM53-208ENST00000476724 RCOR1Q9UKL0 485 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 ARAP2Q8WZ64 1704 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 A0A0G2JLW4 131 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 FOXP2O15409 715 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 TPM3P06753 285 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 TYRO3Q06418 890 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 SF3B3Q15393 1217 aaKnown RBP19.28■□□□□ 0.68
TMEM53-208ENST00000476724 SLC10A5Q5PT55 438 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.28■□□□□ 0.68
TMEM53-208ENST00000476724 MROH5Q6ZUA9 1318 aa19.28■□□□□ 0.68
TMEM53-208ENST00000476724 A0A1B0GUL6 1792 aa19.27■□□□□ 0.68
TMEM53-208ENST00000476724 ZNF213O14771 459 aa19.27■□□□□ 0.68
TMEM53-208ENST00000476724 CAVIN2O95810 425 aa19.27■□□□□ 0.68
TMEM53-208ENST00000476724 UQCRFS1P1P0C7P4 283 aa19.27■□□□□ 0.68
TMEM53-208ENST00000476724 ADD1P35611 737 aaKnown RBP19.27■□□□□ 0.68
TMEM53-208ENST00000476724 IGHMBP2P38935 993 aaKnown RBP19.27■□□□□ 0.68
TMEM53-208ENST00000476724 KIAA2012Q0VF49 1180 aa19.27■□□□□ 0.68
TMEM53-208ENST00000476724 NYXQ9GZU5 481 aa19.27■□□□□ 0.68
TMEM53-208ENST00000476724 PUS7LQ9H0K6 701 aaKnown RBP19.27■□□□□ 0.68
TMEM53-208ENST00000476724 GPAA1O43292 621 aa19.26■□□□□ 0.67
TMEM53-208ENST00000476724 FGFR2P21802 821 aa19.26■□□□□ 0.67
TMEM53-208ENST00000476724 MCAMP43121 646 aa19.26■□□□□ 0.67
TMEM53-208ENST00000476724 UBE3CQ15386 1083 aa19.26■□□□□ 0.67
TMEM53-208ENST00000476724 CAMK4Q16566 473 aa19.26■□□□□ 0.67
TMEM53-208ENST00000476724 PI16Q6UXB8 463 aa19.26■□□□□ 0.67
TMEM53-208ENST00000476724 RGS22Q8NE09 1264 aa19.26■□□□□ 0.67
TMEM53-208ENST00000476724 MRVI1Q9Y6F6 885 aa19.26■□□□□ 0.67
TMEM53-208ENST00000476724 TNRC6CQ9HCJ0 1690 aaKnown RBP19.26■□□□□ 0.67
TMEM53-208ENST00000476724 ADD2P35612 726 aa19.26■□□□□ 0.67
TMEM53-208ENST00000476724 NFIXQ14938 502 aa19.26■□□□□ 0.67
TMEM53-208ENST00000476724 RALYLQ86SE5 291 aaKnown RBP19.26■□□□□ 0.67
TMEM53-208ENST00000476724 MB21D2Q8IYB1 491 aaPredicted RBP19.26■□□□□ 0.67
TMEM53-208ENST00000476724 NAP1L2Q9ULW6 460 aaPredicted RBP19.26■□□□□ 0.67
TMEM53-208ENST00000476724 CTAGE5O15320 804 aa19.25■□□□□ 0.67
TMEM53-208ENST00000476724 PUM3Q15397 648 aaKnown RBP19.25■□□□□ 0.67
TMEM53-208ENST00000476724 CARMIL3Q8ND23 1372 aa19.25■□□□□ 0.67
TMEM53-208ENST00000476724 MYO5AQ9Y4I1 1855 aaKnown RBP19.25■□□□□ 0.67
TMEM53-208ENST00000476724 PRC1O43663 620 aa19.24■□□□□ 0.67
TMEM53-208ENST00000476724 NR1I2O75469 434 aa19.24■□□□□ 0.67
TMEM53-208ENST00000476724 ADRA2BP18089 450 aa19.24■□□□□ 0.67
TMEM53-208ENST00000476724 ARID4AP29374 1257 aaPredicted RBP19.24■□□□□ 0.67
TMEM53-208ENST00000476724 SASS6Q6UVJ0 657 aa19.24■□□□□ 0.67
TMEM53-208ENST00000476724 TPTE2Q6XPS3 522 aa19.24■□□□□ 0.67
TMEM53-208ENST00000476724 CHST3Q7LGC8 479 aa19.24■□□□□ 0.67
TMEM53-208ENST00000476724 NCOA5Q9HCD5 579 aaKnown RBP19.24■□□□□ 0.67
TMEM53-208ENST00000476724 GOLGA6L6A8MZA4 724 aa19.24■□□□□ 0.67
TMEM53-208ENST00000476724 POTEAQ6S8J7 498 aa19.24■□□□□ 0.67
TMEM53-208ENST00000476724 LPIN2Q92539 896 aa19.24■□□□□ 0.67
TMEM53-208ENST00000476724 CELF1Q92879 486 aaKnown RBP19.24■□□□□ 0.67
TMEM53-208ENST00000476724 CDC5LQ99459 802 aaKnown RBP19.24■□□□□ 0.67
TMEM53-208ENST00000476724 APBA3O96018 575 aa19.23■□□□□ 0.67
TMEM53-208ENST00000476724 GYS1P13807 737 aa19.23■□□□□ 0.67
TMEM53-208ENST00000476724 PHKA1P46020 1223 aa19.23■□□□□ 0.67
TMEM53-208ENST00000476724 HAND2P61296 217 aa19.23■□□□□ 0.67
TMEM53-208ENST00000476724 CHRNDQ07001 517 aa19.23■□□□□ 0.67
TMEM53-208ENST00000476724 TRDNQ13061 729 aa19.23■□□□□ 0.67
TMEM53-208ENST00000476724 SLC9C2Q5TAH2 1124 aa19.23■□□□□ 0.67
TMEM53-208ENST00000476724 CCDC102BQ68D86 513 aa19.23■□□□□ 0.67
TMEM53-208ENST00000476724 CKAP2LQ8IYA6 745 aa19.23■□□□□ 0.67
TMEM53-208ENST00000476724 NLRP3Q96P20 1036 aa19.23■□□□□ 0.67
TMEM53-208ENST00000476724 FDPSP14324 419 aaKnown RBP19.22■□□□□ 0.67
TMEM53-208ENST00000476724 PLCB2Q00722 1185 aa19.22■□□□□ 0.67
TMEM53-208ENST00000476724 ANKRD18AQ8IVF6 992 aa19.22■□□□□ 0.67
TMEM53-208ENST00000476724 WTIPA6NIX2 430 aaPredicted RBP19.21■□□□□ 0.67
TMEM53-208ENST00000476724 PIBF1Q8WXW3 757 aa19.21■□□□□ 0.67
TMEM53-208ENST00000476724 TNS1Q9HBL0 1735 aaKnown RBP19.21■□□□□ 0.67
TMEM53-208ENST00000476724 KLF18A0A0U1RQI7 1052 aa19.21■□□□□ 0.67
TMEM53-208ENST00000476724 PLSCR1O15162 318 aa19.21■□□□□ 0.67
TMEM53-208ENST00000476724 ZNF827Q17R98 1081 aa19.21■□□□□ 0.67
TMEM53-208ENST00000476724 ANO6Q4KMQ2 910 aa19.21■□□□□ 0.67
TMEM53-208ENST00000476724 USP28Q96RU2 1077 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms