RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.13■□□□□ 0.17
HLA-DPA1-246ENST00000476642 BEGAINQ9BUH8 593 aa16.13■□□□□ 0.17
HLA-DPA1-246ENST00000476642 WBP1LQ9NX94 342 aa16.13■□□□□ 0.17
HLA-DPA1-246ENST00000476642 HDLBPQ00341 1268 aaKnown RBP16.12■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ANKRD45Q5TZF3 282 aa16.12■□□□□ 0.17
HLA-DPA1-246ENST00000476642 KIAA0825Q8IV33 1275 aa16.12■□□□□ 0.17
HLA-DPA1-246ENST00000476642 SLF2Q8IX21 1173 aa16.12■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ZC3H15Q8WU90 426 aaKnown RBP16.12■□□□□ 0.17
HLA-DPA1-246ENST00000476642 PCNTO95613 3336 aa16.11■□□□□ 0.17
HLA-DPA1-246ENST00000476642 LDHBP07195 334 aaKnown RBP16.11■□□□□ 0.17
HLA-DPA1-246ENST00000476642 MRIQ9BWK5 157 aa16.11■□□□□ 0.17
HLA-DPA1-246ENST00000476642 BCL11AQ9H165 835 aa16.11■□□□□ 0.17
HLA-DPA1-246ENST00000476642 MYOZ2Q9NPC6 264 aa16.11■□□□□ 0.17
HLA-DPA1-246ENST00000476642 HMG20BQ9P0W2 317 aa16.11■□□□□ 0.17
HLA-DPA1-246ENST00000476642 SERPINA10Q9UK55 444 aa16.11■□□□□ 0.17
HLA-DPA1-246ENST00000476642 TTF2Q9UNY4 1162 aaKnown RBP16.11■□□□□ 0.17
HLA-DPA1-246ENST00000476642 JAG2Q9Y219 1238 aa16.11■□□□□ 0.17
HLA-DPA1-246ENST00000476642 AKAP11Q9UKA4 1901 aa16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 TRAF5O00463 557 aa16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 SMARCA5O60264 1052 aaPredicted RBP16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 IGHDP01880 384 aa16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 MCAMP43121 646 aa16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 LBX1P52954 281 aa16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 FMR1Q06787 632 aaKnown RBP eCLIP16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 KIF4BQ2VIQ3 1234 aa16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 TMED8Q6PL24 325 aaPredicted RBP16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 CERS5Q8N5B7 392 aa16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 CAPNS2Q96L46 248 aa16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 MXD3Q9BW11 206 aa16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ECHDC1Q9NTX5 307 aa16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 TLR7Q9NYK1 1049 aaKnown RBP16.1■□□□□ 0.17
HLA-DPA1-246ENST00000476642 F8W031 263 aaPredicted RBP16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ERC2O15083 957 aa16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 MYO1BO43795 1136 aa16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ATP5JP18859 108 aa16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 TTF1Q15361 905 aaPredicted RBP16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 DLGAP5Q15398 846 aa16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 MTMR14Q8NCE2 650 aa16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 TEKT1Q969V4 418 aa16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ABCF2Q9UG63 623 aa16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 TTC41PQ6P2S7 1318 aa16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 COL1A1P02452 1464 aaPredicted RBP16.09■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ECM29Q5VYK3 1845 aa16.08■□□□□ 0.17
HLA-DPA1-246ENST00000476642 CELF2O95319 508 aaKnown RBP16.08■□□□□ 0.16
HLA-DPA1-246ENST00000476642 RBM5P52756 815 aaKnown RBP eCLIP16.08■□□□□ 0.16
HLA-DPA1-246ENST00000476642 GSTO1P78417 241 aa16.08■□□□□ 0.16
HLA-DPA1-246ENST00000476642 TBC1D10BQ4KMP7 808 aaPredicted RBP16.08■□□□□ 0.16
HLA-DPA1-246ENST00000476642 RBM26Q5T8P6 1007 aaKnown RBP16.08■□□□□ 0.16
HLA-DPA1-246ENST00000476642 CYP4F22Q6NT55 531 aa16.08■□□□□ 0.16
HLA-DPA1-246ENST00000476642 SAMD7Q7Z3H4 446 aa16.08■□□□□ 0.16
HLA-DPA1-246ENST00000476642 DZIP1Q86YF9 867 aaKnown RBP16.08■□□□□ 0.16
HLA-DPA1-246ENST00000476642 LRP2BPQ9P2M1 347 aa16.08■□□□□ 0.16
HLA-DPA1-246ENST00000476642 TLL2Q9Y6L7 1015 aa16.08■□□□□ 0.16
HLA-DPA1-246ENST00000476642 CST9Q5W186 159 aa16.07■□□□□ 0.16
HLA-DPA1-246ENST00000476642 HHIPL2Q6UWX4 724 aa16.07■□□□□ 0.16
HLA-DPA1-246ENST00000476642 CHD1LQ86WJ1 897 aa16.07■□□□□ 0.16
HLA-DPA1-246ENST00000476642 ZNF408Q9H9D4 720 aa16.07■□□□□ 0.16
HLA-DPA1-246ENST00000476642 PITPNM2Q9BZ72 1349 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 LDHCP07864 332 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 HSPA8P11142 646 aaKnown RBP16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 MX1P20591 662 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 NUCB1Q02818 461 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 SCARF1Q14162 830 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 CFAP100Q494V2 611 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 B4GALNT3Q6L9W6 998 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 CDC37L1Q7L3B6 337 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 TRPM4Q8TD43 1214 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 DCPSQ96C86 337 aaKnown RBP16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 GLIS2Q9BZE0 524 aaPredicted RBP16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 SNRKQ9NRH2 765 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 RAI14Q9P0K7 980 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 PGAP2Q9UHJ9 254 aa16.06■□□□□ 0.16
HLA-DPA1-246ENST00000476642 MAST2Q6P0Q8 1798 aa16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 SHTN1A0MZ66 631 aa16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 WNT10BO00744 389 aa16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 GLRX3O76003 335 aaKnown RBP16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 PRDX5P30044 214 aa16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 ZAP70P43403 619 aa16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 CRKP46108 304 aa16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 MAP3K12Q12852 859 aa16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 CENPQQ7L2Z9 268 aaPredicted RBP16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 CCDC136Q96JN2 1154 aa16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 ZDHHC15Q96MV8 337 aa16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 HAUS7Q99871 368 aa16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 MYH2Q9UKX2 1941 aa16.05■□□□□ 0.16
HLA-DPA1-246ENST00000476642 DOCK2Q92608 1830 aa16.04■□□□□ 0.16
HLA-DPA1-246ENST00000476642 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
HLA-DPA1-246ENST00000476642 CYP2E1P05181 493 aaPredicted RBP16.04■□□□□ 0.16
HLA-DPA1-246ENST00000476642 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
HLA-DPA1-246ENST00000476642 MAP2K2P36507 400 aa16.04■□□□□ 0.16
HLA-DPA1-246ENST00000476642 HIRAP54198 1017 aaPredicted RBP16.04■□□□□ 0.16
HLA-DPA1-246ENST00000476642 PI16Q6UXB8 463 aa16.04■□□□□ 0.16
HLA-DPA1-246ENST00000476642 NOL10Q9BSC4 688 aaKnown RBP16.04■□□□□ 0.16
HLA-DPA1-246ENST00000476642 LNPKQ9C0E8 428 aa16.04■□□□□ 0.16
HLA-DPA1-246ENST00000476642 BOLA2Q9H3K6 86 aa16.04■□□□□ 0.16
HLA-DPA1-246ENST00000476642 TMOD2Q9NZR1 351 aa16.04■□□□□ 0.16
HLA-DPA1-246ENST00000476642 AOX1Q06278 1338 aa16.03■□□□□ 0.16
HLA-DPA1-246ENST00000476642 LRRFIP1Q32MZ4 808 aaKnown RBP16.03■□□□□ 0.16
HLA-DPA1-246ENST00000476642 SAPCD2Q86UD0 394 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms