RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 MMP14P50281 582 aa15.22■□□□□ 0.03
HDAC6-219ENST00000476625 INHBEP58166 350 aa15.22■□□□□ 0.03
HDAC6-219ENST00000476625 SP3Q02447 781 aa15.22■□□□□ 0.03
HDAC6-219ENST00000476625 TDRD7Q8NHU6 1098 aaKnown RBP15.22■□□□□ 0.03
HDAC6-219ENST00000476625 OTUD5Q96G74 571 aa15.22■□□□□ 0.03
HDAC6-219ENST00000476625 FAM84BQ96KN1 310 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-219ENST00000476625 IL16Q14005 1332 aa15.21■□□□□ 0.03
HDAC6-219ENST00000476625 FAM205AQ6ZU69 1335 aa15.21■□□□□ 0.03
HDAC6-219ENST00000476625 GRM8O00222 908 aa15.21■□□□□ 0.03
HDAC6-219ENST00000476625 CRKP46108 304 aa15.21■□□□□ 0.03
HDAC6-219ENST00000476625 FKBP1AP62942 108 aaKnown RBP15.21■□□□□ 0.03
HDAC6-219ENST00000476625 CHAF1AQ13111 956 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-219ENST00000476625 CCDC57Q2TAC2 916 aa15.21■□□□□ 0.03
HDAC6-219ENST00000476625 SLC4A10Q6U841 1118 aa15.21■□□□□ 0.03
HDAC6-219ENST00000476625 DZIP1LQ8IYY4 767 aaKnown RBP15.21■□□□□ 0.03
HDAC6-219ENST00000476625 ARMC5Q96C12 935 aa15.21■□□□□ 0.03
HDAC6-219ENST00000476625 CHMP4AQ9BY43 222 aa15.21■□□□□ 0.03
HDAC6-219ENST00000476625 CCL15-CCL14A0A0B4J2E2 113 aa15.2■□□□□ 0.02
HDAC6-219ENST00000476625 TAF1CQ15572 869 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-219ENST00000476625 CCL15Q16663 113 aa15.2■□□□□ 0.02
HDAC6-219ENST00000476625 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.2■□□□□ 0.02
HDAC6-219ENST00000476625 KLHDC4Q8TBB5 520 aa15.2■□□□□ 0.02
HDAC6-219ENST00000476625 SH3TC2Q8TF17 1288 aa15.2■□□□□ 0.02
HDAC6-219ENST00000476625 NBPF7P0C2Y1 421 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-219ENST00000476625 HIBADHP31937 336 aaKnown RBP15.19■□□□□ 0.02
HDAC6-219ENST00000476625 LRRC24Q50LG9 513 aa15.19■□□□□ 0.02
HDAC6-219ENST00000476625 ZNF333Q96JL9 665 aa15.19■□□□□ 0.02
HDAC6-219ENST00000476625 SNCAIPQ9Y6H5 919 aa15.19■□□□□ 0.02
HDAC6-219ENST00000476625 CTGFP29279 349 aa15.18■□□□□ 0.02
HDAC6-219ENST00000476625 INTS3Q68E01 1043 aaKnown RBP15.18■□□□□ 0.02
HDAC6-219ENST00000476625 ZKSCAN4Q969J2 545 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-219ENST00000476625 MGAMO43451 1857 aa15.17■□□□□ 0.02
HDAC6-219ENST00000476625 FXR1P51114 621 aaKnown RBP eCLIP15.17■□□□□ 0.02
HDAC6-219ENST00000476625 OTUD7BQ6GQQ9 843 aa15.17■□□□□ 0.02
HDAC6-219ENST00000476625 C9orf78Q9NZ63 289 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-219ENST00000476625 SERPINA10Q9UK55 444 aa15.17■□□□□ 0.02
HDAC6-219ENST00000476625 COLQQ9Y215 455 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-219ENST00000476625 AK9Q5TCS8 1911 aa15.17■□□□□ 0.02
HDAC6-219ENST00000476625 MAP3K9P80192 1104 aa15.16■□□□□ 0.02
HDAC6-219ENST00000476625 UBE4AQ14139 1066 aa15.16■□□□□ 0.02
HDAC6-219ENST00000476625 SLC9C1Q4G0N8 1177 aa15.16■□□□□ 0.02
HDAC6-219ENST00000476625 BICC1Q9H694 974 aaKnown RBP15.16■□□□□ 0.02
HDAC6-219ENST00000476625 MRS2Q9HD23 443 aa15.16■□□□□ 0.02
HDAC6-219ENST00000476625 RIPOR2Q9Y4F9 1068 aa15.16■□□□□ 0.02
HDAC6-219ENST00000476625 KIAA0100Q14667 2235 aaKnown RBP15.16■□□□□ 0.02
HDAC6-219ENST00000476625 UNCXA6NJT0 531 aa15.15■□□□□ 0.02
HDAC6-219ENST00000476625 BTBD19C9JJ37 291 aa15.15■□□□□ 0.02
HDAC6-219ENST00000476625 BCAMP50895 628 aa15.15■□□□□ 0.02
HDAC6-219ENST00000476625 TNFAIP1Q13829 316 aa15.15■□□□□ 0.02
HDAC6-219ENST00000476625 ANKRD44Q8N8A2 993 aa15.15■□□□□ 0.02
HDAC6-219ENST00000476625 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
HDAC6-219ENST00000476625 WRNIP1Q96S55 665 aa15.15■□□□□ 0.02
HDAC6-219ENST00000476625 ZFYVE28Q9HCC9 887 aa15.15■□□□□ 0.02
HDAC6-219ENST00000476625 SPDYE5A6NIY4 337 aa15.14■□□□□ 0.01
HDAC6-219ENST00000476625 IRF6O14896 467 aa15.14■□□□□ 0.01
HDAC6-219ENST00000476625 GTF2A2P52657 109 aa15.14■□□□□ 0.01
HDAC6-219ENST00000476625 MTFR1Q15390 333 aa15.14■□□□□ 0.01
HDAC6-219ENST00000476625 SLC4A8Q2Y0W8 1093 aa15.14■□□□□ 0.01
HDAC6-219ENST00000476625 MIGA2Q7L4E1 593 aa15.14■□□□□ 0.01
HDAC6-219ENST00000476625 FBXO33Q7Z6M2 555 aa15.14■□□□□ 0.01
HDAC6-219ENST00000476625 VGLL2Q8N8G2 317 aa15.14■□□□□ 0.01
HDAC6-219ENST00000476625 SRCIN1Q9C0H9 1055 aa15.14■□□□□ 0.01
HDAC6-219ENST00000476625 CSADQ9Y600 493 aa15.14■□□□□ 0.01
HDAC6-219ENST00000476625 DOCK2Q92608 1830 aa15.14■□□□□ 0.01
HDAC6-219ENST00000476625 INPP5BP32019 993 aa15.13■□□□□ 0.01
HDAC6-219ENST00000476625 METTL24Q5JXM2 366 aa15.13■□□□□ 0.01
HDAC6-219ENST00000476625 WDR63Q8IWG1 891 aa15.13■□□□□ 0.01
HDAC6-219ENST00000476625 SHISA4Q96DD7 197 aa15.13■□□□□ 0.01
HDAC6-219ENST00000476625 TMEM106CQ9BVX2 250 aa15.13■□□□□ 0.01
HDAC6-219ENST00000476625 CPA4Q9UI42 421 aa15.13■□□□□ 0.01
HDAC6-219ENST00000476625 H0YGN5 161 aa15.12■□□□□ 0.01
HDAC6-219ENST00000476625 ALDH1L1O75891 902 aa15.12■□□□□ 0.01
HDAC6-219ENST00000476625 SLURP2P0DP57 97 aa15.12■□□□□ 0.01
HDAC6-219ENST00000476625 TNNI2P48788 182 aa15.12■□□□□ 0.01
HDAC6-219ENST00000476625 LACTBP83111 547 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-219ENST00000476625 APOBEC3HQ6NTF7 200 aaKnown RBP15.12■□□□□ 0.01
HDAC6-219ENST00000476625 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-219ENST00000476625 TLR2O60603 784 aa15.11■□□□□ 0.01
HDAC6-219ENST00000476625 FRAT2O75474 233 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-219ENST00000476625 VPS37DQ86XT2 251 aa15.11■□□□□ 0.01
HDAC6-219ENST00000476625 TEKT1Q969V4 418 aa15.11■□□□□ 0.01
HDAC6-219ENST00000476625 MROH5Q6ZUA9 1318 aa15.11■□□□□ 0.01
HDAC6-219ENST00000476625 PHIPQ8WWQ0 1821 aa15.1■□□□□ 0.01
HDAC6-219ENST00000476625 PTPRFP10586 1907 aa15.1■□□□□ 0.01
HDAC6-219ENST00000476625 TCP10Q12799 353 aa15.1■□□□□ 0.01
HDAC6-219ENST00000476625 DIXDC1Q155Q3 683 aa15.1■□□□□ 0.01
HDAC6-219ENST00000476625 RABL6Q3YEC7 729 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-219ENST00000476625 ZDHHC15Q96MV8 337 aa15.1■□□□□ 0.01
HDAC6-219ENST00000476625 UTYO14607 1347 aa15.1■□□□□ 0.01
HDAC6-219ENST00000476625 CETPP11597 493 aa15.09■□□□□ 0.01
HDAC6-219ENST00000476625 NFIAQ12857 509 aa15.09■□□□□ 0.01
HDAC6-219ENST00000476625 ERO1BQ86YB8 467 aa15.09■□□□□ 0.01
HDAC6-219ENST00000476625 ZFPM1Q8IX07 1006 aa15.09■□□□□ 0.01
HDAC6-219ENST00000476625 TRIM47Q96LD4 638 aa15.09■□□□□ 0.01
HDAC6-219ENST00000476625 ADGRA2Q96PE1 1338 aa15.09■□□□□ 0.01
HDAC6-219ENST00000476625 ALPK3Q96L96 1907 aa15.09■□□□□ 0.01
HDAC6-219ENST00000476625 MYH2Q9UKX2 1941 aa15.09■□□□□ 0.01
HDAC6-219ENST00000476625 PDE8BO95263 885 aa15.08■□□□□ 0
HDAC6-219ENST00000476625 PPIL2Q13356 520 aa15.08■□□□□ 0
HDAC6-219ENST00000476625 SNAPC2Q13487 334 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms