RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 ACTL7BQ9Y614 415 aa9.89□□□□□ -0.83
NUP58-209ENST00000476553 A6NHS1 94 aa9.88□□□□□ -0.83
NUP58-209ENST00000476553 DBX1A6NMT0 343 aa9.88□□□□□ -0.83
NUP58-209ENST00000476553 PDGFAP04085 211 aa9.88□□□□□ -0.83
NUP58-209ENST00000476553 CYP27A1Q02318 531 aa9.88□□□□□ -0.83
NUP58-209ENST00000476553 FBLN7Q53RD9 439 aa9.88□□□□□ -0.83
NUP58-209ENST00000476553 BCL7CQ8WUZ0 217 aaPredicted RBP9.88□□□□□ -0.83
NUP58-209ENST00000476553 SRPK2P78362 688 aaKnown RBP9.87□□□□□ -0.83
NUP58-209ENST00000476553 DUSP27Q5VZP5 1158 aa9.87□□□□□ -0.83
NUP58-209ENST00000476553 SEMA6CQ9H3T2 930 aa9.87□□□□□ -0.83
NUP58-209ENST00000476553 LRRC4CQ9HCJ2 640 aa9.87□□□□□ -0.83
NUP58-209ENST00000476553 SEPT3Q9UH03 358 aa9.87□□□□□ -0.83
NUP58-209ENST00000476553 MAP7Q14244 749 aa9.86□□□□□ -0.83
NUP58-209ENST00000476553 ZNF792Q3KQV3 632 aa9.86□□□□□ -0.83
NUP58-209ENST00000476553 ZNF574Q6ZN55 896 aaPredicted RBP9.86□□□□□ -0.83
NUP58-209ENST00000476553 SLAIN2Q9P270 581 aa9.86□□□□□ -0.83
NUP58-209ENST00000476553 SLC5A6Q9Y289 635 aa9.86□□□□□ -0.83
NUP58-209ENST00000476553 EREGO14944 169 aa9.85□□□□□ -0.83
NUP58-209ENST00000476553 EIF4EBP3O60516 100 aaPredicted RBP9.85□□□□□ -0.83
NUP58-209ENST00000476553 EDN3P14138 238 aa9.85□□□□□ -0.83
NUP58-209ENST00000476553 DNM1Q05193 864 aaKnown RBP9.85□□□□□ -0.83
NUP58-209ENST00000476553 TRIM26Q12899 539 aaPredicted RBP9.85□□□□□ -0.83
NUP58-209ENST00000476553 PLCL1Q15111 1095 aa9.85□□□□□ -0.83
NUP58-209ENST00000476553 ZNF124Q15973 351 aa9.85□□□□□ -0.83
NUP58-209ENST00000476553 ACSS3Q9H6R3 686 aa9.85□□□□□ -0.83
NUP58-209ENST00000476553 BIN1O00499 593 aa9.84□□□□□ -0.83
NUP58-209ENST00000476553 ATG7O95352 703 aa9.84□□□□□ -0.83
NUP58-209ENST00000476553 NFICP08651 508 aa9.84□□□□□ -0.83
NUP58-209ENST00000476553 PCSK2P16519 638 aa9.84□□□□□ -0.83
NUP58-209ENST00000476553 GSTM4Q03013 218 aa9.84□□□□□ -0.83
NUP58-209ENST00000476553 HELQQ8TDG4 1101 aa9.84□□□□□ -0.83
NUP58-209ENST00000476553 RAB6AP20340 208 aa9.83□□□□□ -0.84
NUP58-209ENST00000476553 MZF1P28698 734 aaPredicted RBP9.83□□□□□ -0.84
NUP58-209ENST00000476553 SEZ6L2Q6UXD5 910 aa9.83□□□□□ -0.84
NUP58-209ENST00000476553 SPRED2Q7Z698 418 aa9.83□□□□□ -0.84
NUP58-209ENST00000476553 STK11IPQ8N1F8 1099 aa9.83□□□□□ -0.84
NUP58-209ENST00000476553 ASAP3Q8TDY4 903 aa9.83□□□□□ -0.84
NUP58-209ENST00000476553 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.82□□□□□ -0.84
NUP58-209ENST00000476553 C8orf34Q49A92 452 aa9.82□□□□□ -0.84
NUP58-209ENST00000476553 PEAR1Q5VY43 1037 aaPredicted RBP9.82□□□□□ -0.84
NUP58-209ENST00000476553 GSX1Q9H4S2 264 aaPredicted RBP9.82□□□□□ -0.84
NUP58-209ENST00000476553 C1GALT1Q9NS00 363 aa9.82□□□□□ -0.84
NUP58-209ENST00000476553 FAM105AQ9NUU6 356 aa9.82□□□□□ -0.84
NUP58-209ENST00000476553 CTSBP07858 339 aa9.81□□□□□ -0.84
NUP58-209ENST00000476553 ATG4DQ86TL0 474 aaPredicted RBP9.81□□□□□ -0.84
NUP58-209ENST00000476553 SNX29Q8TEQ0 813 aa9.81□□□□□ -0.84
NUP58-209ENST00000476553 TNFRSF21O75509 655 aa9.8□□□□□ -0.84
NUP58-209ENST00000476553 FARP2O94887 1054 aaPredicted RBP9.8□□□□□ -0.84
NUP58-209ENST00000476553 ZNF777Q9ULD5 760 aaPredicted RBP9.8□□□□□ -0.84
NUP58-209ENST00000476553 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.79□□□□□ -0.84
NUP58-209ENST00000476553 KRTAP9-7A8MTY7 169 aa9.79□□□□□ -0.84
NUP58-209ENST00000476553 PHACTR2O75167 634 aa9.79□□□□□ -0.84
NUP58-209ENST00000476553 NOM1Q5C9Z4 860 aaKnown RBP9.79□□□□□ -0.84
NUP58-209ENST00000476553 GLIS3Q8NEA6 775 aa9.79□□□□□ -0.84
NUP58-209ENST00000476553 MISP3Q96FF7 219 aa9.79□□□□□ -0.84
NUP58-209ENST00000476553 LATS2Q9NRM7 1088 aa9.79□□□□□ -0.84
NUP58-209ENST00000476553 METTL12A8MUP2 240 aa9.78□□□□□ -0.84
NUP58-209ENST00000476553 ATP2B4P23634 1241 aa9.78□□□□□ -0.84
NUP58-209ENST00000476553 MAOBP27338 520 aa9.78□□□□□ -0.84
NUP58-209ENST00000476553 EIF1AXP47813 144 aaKnown RBP9.78□□□□□ -0.84
NUP58-209ENST00000476553 TTC16Q8NEE8 873 aa9.78□□□□□ -0.84
NUP58-209ENST00000476553 DYNC1LI2O43237 492 aaPredicted RBP9.77□□□□□ -0.85
NUP58-209ENST00000476553 FUT4P22083 530 aa9.77□□□□□ -0.85
NUP58-209ENST00000476553 HP1BP3Q5SSJ5 553 aaPredicted RBP9.77□□□□□ -0.85
NUP58-209ENST00000476553 OGFOD3Q6PK18 319 aa9.77□□□□□ -0.85
NUP58-209ENST00000476553 FAM168AQ92567 244 aa9.77□□□□□ -0.85
NUP58-209ENST00000476553 PCDH1Q08174 1060 aa9.76□□□□□ -0.85
NUP58-209ENST00000476553 DYMQ7RTS9 669 aa9.76□□□□□ -0.85
NUP58-209ENST00000476553 FOXD3Q9UJU5 478 aaPredicted RBP9.76□□□□□ -0.85
NUP58-209ENST00000476553 MPSTP25325 297 aa9.75□□□□□ -0.85
NUP58-209ENST00000476553 ZNF423Q2M1K9 1284 aa9.75□□□□□ -0.85
NUP58-209ENST00000476553 AKAP4Q5JQC9 854 aa9.75□□□□□ -0.85
NUP58-209ENST00000476553 CLEC4MQ9H2X3 399 aaPredicted RBP9.75□□□□□ -0.85
NUP58-209ENST00000476553 RC3H2Q9HBD1 1191 aaKnown RBP9.75□□□□□ -0.85
NUP58-209ENST00000476553 POLIQ9UNA4 740 aa9.75□□□□□ -0.85
NUP58-209ENST00000476553 AP4E1Q9UPM8 1137 aa9.75□□□□□ -0.85
NUP58-209ENST00000476553 CYP11A1P05108 521 aa9.74□□□□□ -0.85
NUP58-209ENST00000476553 RNASE1P07998 156 aaKnown RBP9.74□□□□□ -0.85
NUP58-209ENST00000476553 POU4F3Q15319 338 aa9.74□□□□□ -0.85
NUP58-209ENST00000476553 PKN1Q16512 942 aa9.74□□□□□ -0.85
NUP58-209ENST00000476553 TMEM40Q8WWA1 233 aa9.74□□□□□ -0.85
NUP58-209ENST00000476553 TRIM56Q9BRZ2 755 aaKnown RBP9.74□□□□□ -0.85
NUP58-209ENST00000476553 MBNL3Q9NUK0 354 aaKnown RBP9.74□□□□□ -0.85
NUP58-209ENST00000476553 ADAMTS6Q9UKP5 1117 aa9.74□□□□□ -0.85
NUP58-209ENST00000476553 AMOTL2Q9Y2J4 779 aa9.74□□□□□ -0.85
NUP58-209ENST00000476553 BNIP3Q12983 259 aa9.73□□□□□ -0.85
NUP58-209ENST00000476553 KRTAP4-5Q9BYR2 181 aa9.73□□□□□ -0.85
NUP58-209ENST00000476553 DAGLAQ9Y4D2 1042 aa9.73□□□□□ -0.85
NUP58-209ENST00000476553 CD8BP10966 210 aa9.72□□□□□ -0.85
NUP58-209ENST00000476553 ASPAP45381 313 aa9.72□□□□□ -0.85
NUP58-209ENST00000476553 KRTAP19-4Q3LI73 84 aa9.72□□□□□ -0.85
NUP58-209ENST00000476553 A0A096LPE4 126 aa9.71□□□□□ -0.86
NUP58-209ENST00000476553 A0A1W2PPZ6 126 aa9.71□□□□□ -0.86
NUP58-209ENST00000476553 EHHADHQ08426 723 aa9.71□□□□□ -0.86
NUP58-209ENST00000476553 CYP27C1Q4G0S4 372 aa9.71□□□□□ -0.86
NUP58-209ENST00000476553 CCNJLQ8IV13 435 aa9.71□□□□□ -0.86
NUP58-209ENST00000476553 KSR1Q8IVT5 923 aa9.71□□□□□ -0.86
NUP58-209ENST00000476553 PLD6Q8N2A8 252 aaKnown RBP9.71□□□□□ -0.86
NUP58-209ENST00000476553 NETO1Q8TDF5 533 aa9.71□□□□□ -0.86
NUP58-209ENST00000476553 ZFYVE1Q9HBF4 777 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms