RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 TRIOBPQ9H2D6 2365 aa20.96■□□□□ 0.95
APOBEC3F-203ENST00000476513 TCP10L2B9ZVM9 353 aa20.95■□□□□ 0.94
APOBEC3F-203ENST00000476513 DZIP1LQ8IYY4 767 aaKnown RBP20.95■□□□□ 0.94
APOBEC3F-203ENST00000476513 TDRD7Q8NHU6 1098 aaKnown RBP20.95■□□□□ 0.94
APOBEC3F-203ENST00000476513 SH3TC2Q8TF17 1288 aa20.95■□□□□ 0.94
APOBEC3F-203ENST00000476513 OTUD5Q96G74 571 aa20.95■□□□□ 0.94
APOBEC3F-203ENST00000476513 ZNF594Q96JF6 807 aaPredicted RBP20.94■□□□□ 0.94
APOBEC3F-203ENST00000476513 ARHGAP39Q9C0H5 1083 aa20.94■□□□□ 0.94
APOBEC3F-203ENST00000476513 CSADQ9Y600 493 aa20.94■□□□□ 0.94
APOBEC3F-203ENST00000476513 A0A1B0GUL6 1792 aa20.93■□□□□ 0.94
APOBEC3F-203ENST00000476513 LMBR1LQ6UX01 489 aa20.93■□□□□ 0.94
APOBEC3F-203ENST00000476513 LDHAL6AQ6ZMR3 332 aa20.93■□□□□ 0.94
APOBEC3F-203ENST00000476513 SPDYE5A6NIY4 337 aa20.92■□□□□ 0.94
APOBEC3F-203ENST00000476513 TLR2O60603 784 aa20.92■□□□□ 0.94
APOBEC3F-203ENST00000476513 CRKP46108 304 aa20.92■□□□□ 0.94
APOBEC3F-203ENST00000476513 LACTBP83111 547 aaPredicted RBP20.92■□□□□ 0.94
APOBEC3F-203ENST00000476513 EPHA10Q5JZY3 1008 aa20.92■□□□□ 0.94
APOBEC3F-203ENST00000476513 CNNM1Q9NRU3 951 aa20.92■□□□□ 0.94
APOBEC3F-203ENST00000476513 GYG1P46976 350 aa20.91■□□□□ 0.94
APOBEC3F-203ENST00000476513 TNNI2P48788 182 aa20.91■□□□□ 0.94
APOBEC3F-203ENST00000476513 CCDC57Q2TAC2 916 aa20.91■□□□□ 0.94
APOBEC3F-203ENST00000476513 TAF7LQ5H9L4 462 aa20.91■□□□□ 0.94
APOBEC3F-203ENST00000476513 WWC1Q8IX03 1113 aa20.91■□□□□ 0.94
APOBEC3F-203ENST00000476513 BTBD19C9JJ37 291 aa20.9■□□□□ 0.94
APOBEC3F-203ENST00000476513 WDHD1O75717 1129 aaPredicted RBP20.9■□□□□ 0.94
APOBEC3F-203ENST00000476513 CETPP11597 493 aa20.9■□□□□ 0.94
APOBEC3F-203ENST00000476513 HIBADHP31937 336 aaKnown RBP20.9■□□□□ 0.94
APOBEC3F-203ENST00000476513 KIF22Q14807 665 aa20.9■□□□□ 0.94
APOBEC3F-203ENST00000476513 CCDC27Q2M243 656 aa20.9■□□□□ 0.94
APOBEC3F-203ENST00000476513 CHRDL2Q6WN34 429 aa20.9■□□□□ 0.94
APOBEC3F-203ENST00000476513 FAM84BQ96KN1 310 aaPredicted RBP20.9■□□□□ 0.94
APOBEC3F-203ENST00000476513 SNCAIPQ9Y6H5 919 aa20.9■□□□□ 0.94
APOBEC3F-203ENST00000476513 F6X3S4 739 aa20.89■□□□□ 0.93
APOBEC3F-203ENST00000476513 UBE4AQ14139 1066 aa20.89■□□□□ 0.93
APOBEC3F-203ENST00000476513 GRIK5Q16478 980 aa20.89■□□□□ 0.93
APOBEC3F-203ENST00000476513 BEND3Q5T5X7 828 aa20.89■□□□□ 0.93
APOBEC3F-203ENST00000476513 ERO1BQ86YB8 467 aa20.89■□□□□ 0.93
APOBEC3F-203ENST00000476513 ZCCHC17Q9NP64 241 aaKnown RBP20.89■□□□□ 0.93
APOBEC3F-203ENST00000476513 GNRH1P01148 92 aa20.88■□□□□ 0.93
APOBEC3F-203ENST00000476513 SHISA4Q96DD7 197 aa20.88■□□□□ 0.93
APOBEC3F-203ENST00000476513 IL16Q14005 1332 aa20.87■□□□□ 0.93
APOBEC3F-203ENST00000476513 IRF6O14896 467 aa20.87■□□□□ 0.93
APOBEC3F-203ENST00000476513 CACNB3P54284 484 aa20.87■□□□□ 0.93
APOBEC3F-203ENST00000476513 PRMT2P55345 433 aa20.87■□□□□ 0.93
APOBEC3F-203ENST00000476513 SNAPC2Q13487 334 aa20.87■□□□□ 0.93
APOBEC3F-203ENST00000476513 MTFR1Q15390 333 aa20.87■□□□□ 0.93
APOBEC3F-203ENST00000476513 WRNIP1Q96S55 665 aa20.87■□□□□ 0.93
APOBEC3F-203ENST00000476513 ZSWIM8A7E2V4 1837 aa20.87■□□□□ 0.93
APOBEC3F-203ENST00000476513 ARAP2Q8WZ64 1704 aa20.87■□□□□ 0.93
APOBEC3F-203ENST00000476513 ECM2O94769 699 aaPredicted RBP20.86■□□□□ 0.93
APOBEC3F-203ENST00000476513 ZKSCAN4Q969J2 545 aaPredicted RBP20.86■□□□□ 0.93
APOBEC3F-203ENST00000476513 RBM27Q9P2N5 1060 aaKnown RBP20.86■□□□□ 0.93
APOBEC3F-203ENST00000476513 GRM8O00222 908 aa20.85■□□□□ 0.93
APOBEC3F-203ENST00000476513 VAMP4O75379 141 aa20.85■□□□□ 0.93
APOBEC3F-203ENST00000476513 CTGFP29279 349 aa20.85■□□□□ 0.93
APOBEC3F-203ENST00000476513 PPIL2Q13356 520 aa20.85■□□□□ 0.93
APOBEC3F-203ENST00000476513 C17orf99Q6UX52 265 aa20.85■□□□□ 0.93
APOBEC3F-203ENST00000476513 DPF3Q92784 378 aa20.85■□□□□ 0.93
APOBEC3F-203ENST00000476513 PUS3Q9BZE2 481 aaKnown RBP20.85■□□□□ 0.93
APOBEC3F-203ENST00000476513 FANCIQ9NVI1 1328 aa20.84■□□□□ 0.93
APOBEC3F-203ENST00000476513 HDLBPQ00341 1268 aaKnown RBP20.84■□□□□ 0.93
APOBEC3F-203ENST00000476513 SRRDQ9UH36 339 aa20.84■□□□□ 0.93
APOBEC3F-203ENST00000476513 IQSEC3Q9UPP2 1182 aaPredicted RBP20.84■□□□□ 0.93
APOBEC3F-203ENST00000476513 CHAF1AQ13111 956 aaPredicted RBP20.83■□□□□ 0.93
APOBEC3F-203ENST00000476513 FBXO33Q7Z6M2 555 aa20.83■□□□□ 0.93
APOBEC3F-203ENST00000476513 TRIM47Q96LD4 638 aa20.83■□□□□ 0.93
APOBEC3F-203ENST00000476513 CPA4Q9UI42 421 aa20.83■□□□□ 0.93
APOBEC3F-203ENST00000476513 PSMC4P43686 418 aa20.82■□□□□ 0.92
APOBEC3F-203ENST00000476513 UBE2Q1Q7Z7E8 422 aa20.82■□□□□ 0.92
APOBEC3F-203ENST00000476513 FAM83AQ86UY5 434 aa20.82■□□□□ 0.92
APOBEC3F-203ENST00000476513 TEKT1Q969V4 418 aa20.82■□□□□ 0.92
APOBEC3F-203ENST00000476513 HOOK2Q96ED9 719 aa20.82■□□□□ 0.92
APOBEC3F-203ENST00000476513 RIPOR2Q9Y4F9 1068 aa20.82■□□□□ 0.92
APOBEC3F-203ENST00000476513 OSBPP22059 807 aa20.81■□□□□ 0.92
APOBEC3F-203ENST00000476513 GRK4P32298 578 aa20.81■□□□□ 0.92
APOBEC3F-203ENST00000476513 FKBP1CQ5VVH2 108 aa20.81■□□□□ 0.92
APOBEC3F-203ENST00000476513 VPS37DQ86XT2 251 aa20.81■□□□□ 0.92
APOBEC3F-203ENST00000476513 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.81■□□□□ 0.92
APOBEC3F-203ENST00000476513 NKX2-3Q8TAU0 364 aa20.81■□□□□ 0.92
APOBEC3F-203ENST00000476513 TBC1D22AQ8WUA7 517 aa20.81■□□□□ 0.92
APOBEC3F-203ENST00000476513 ZDHHC15Q96MV8 337 aa20.81■□□□□ 0.92
APOBEC3F-203ENST00000476513 C9orf78Q9NZ63 289 aaPredicted RBP20.81■□□□□ 0.92
APOBEC3F-203ENST00000476513 TMOD2Q9NZR1 351 aa20.81■□□□□ 0.92
APOBEC3F-203ENST00000476513 HOXD10P28358 340 aa20.8■□□□□ 0.92
APOBEC3F-203ENST00000476513 GJA8P48165 433 aa20.8■□□□□ 0.92
APOBEC3F-203ENST00000476513 PPATQ06203 517 aa20.8■□□□□ 0.92
APOBEC3F-203ENST00000476513 APOBEC3HQ6NTF7 200 aaKnown RBP20.8■□□□□ 0.92
APOBEC3F-203ENST00000476513 ANKRD23Q86SG2 305 aa20.8■□□□□ 0.92
APOBEC3F-203ENST00000476513 RAET1EQ8TD07 263 aa20.8■□□□□ 0.92
APOBEC3F-203ENST00000476513 MRIQ9BWK5 157 aa20.8■□□□□ 0.92
APOBEC3F-203ENST00000476513 PRO3102Q9H379 93 aa20.8■□□□□ 0.92
APOBEC3F-203ENST00000476513 SZT2Q5T011 3432 aa20.8■□□□□ 0.92
APOBEC3F-203ENST00000476513 MROH5Q6ZUA9 1318 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 ADGRA2Q96PE1 1338 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 PDHXO00330 501 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 FMNL1O95466 1100 aaPredicted RBP20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 GJB1P08034 283 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 CCL5P13501 91 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 INPP5BP32019 993 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 EXOSC9Q06265 439 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms