RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 PNMA6EA0A0J9YXQ4 647 aa22.19■■□□□ 1.14
RAPGEF3-208ENST00000476259 KIF23Q02241 960 aaPredicted RBP22.19■■□□□ 1.14
RAPGEF3-208ENST00000476259 SPDYE2Q495Y8 402 aa22.19■■□□□ 1.14
RAPGEF3-208ENST00000476259 ARMC9Q7Z3E5 817 aa22.19■■□□□ 1.14
RAPGEF3-208ENST00000476259 RASAL3Q86YV0 1011 aa22.19■■□□□ 1.14
RAPGEF3-208ENST00000476259 ZNF70Q9UC06 446 aaPredicted RBP22.19■■□□□ 1.14
RAPGEF3-208ENST00000476259 SSC5DA1L4H1 1573 aa22.18■■□□□ 1.14
RAPGEF3-208ENST00000476259 MAST3O60307 1309 aa22.18■■□□□ 1.14
RAPGEF3-208ENST00000476259 CA12O43570 354 aa22.18■■□□□ 1.14
RAPGEF3-208ENST00000476259 RLBP1P12271 317 aa22.18■■□□□ 1.14
RAPGEF3-208ENST00000476259 HDLBPQ00341 1268 aaKnown RBP22.18■■□□□ 1.14
RAPGEF3-208ENST00000476259 ITPRIPQ8IWB1 547 aa22.18■■□□□ 1.14
RAPGEF3-208ENST00000476259 WDR66Q8TBY9 1149 aa22.18■■□□□ 1.14
RAPGEF3-208ENST00000476259 TEKT1Q969V4 418 aa22.18■■□□□ 1.14
RAPGEF3-208ENST00000476259 GNL3LQ9NVN8 582 aaKnown RBP22.18■■□□□ 1.14
RAPGEF3-208ENST00000476259 TSKSQ9UJT2 592 aa22.18■■□□□ 1.14
RAPGEF3-208ENST00000476259 SUGT1Q9Y2Z0 365 aa22.18■■□□□ 1.14
RAPGEF3-208ENST00000476259 PHKA1P46020 1223 aa22.17■■□□□ 1.14
RAPGEF3-208ENST00000476259 TFCP2Q12800 502 aa22.17■■□□□ 1.14
RAPGEF3-208ENST00000476259 TNFAIP1Q13829 316 aa22.17■■□□□ 1.14
RAPGEF3-208ENST00000476259 OTOFQ9HC10 1997 aa22.17■■□□□ 1.14
RAPGEF3-208ENST00000476259 ADORA1P30542 326 aa22.16■■□□□ 1.14
RAPGEF3-208ENST00000476259 TIMM10P62072 90 aa22.16■■□□□ 1.14
RAPGEF3-208ENST00000476259 RASA3Q14644 834 aa22.16■■□□□ 1.14
RAPGEF3-208ENST00000476259 ANGEL1Q9UNK9 670 aaKnown RBP22.16■■□□□ 1.14
RAPGEF3-208ENST00000476259 FZD1Q9UP38 647 aa22.16■■□□□ 1.14
RAPGEF3-208ENST00000476259 AKAP2Q9Y2D5 859 aa22.16■■□□□ 1.14
RAPGEF3-208ENST00000476259 CASP8AP2Q9UKL3 1982 aa22.16■■□□□ 1.14
RAPGEF3-208ENST00000476259 MYH2Q9UKX2 1941 aa22.16■■□□□ 1.14
RAPGEF3-208ENST00000476259 A0A1B0GUL7 405 aa22.15■■□□□ 1.14
RAPGEF3-208ENST00000476259 SUPT20HL1Q3ZLR7 823 aa22.15■■□□□ 1.14
RAPGEF3-208ENST00000476259 CCDC102BQ68D86 513 aa22.15■■□□□ 1.14
RAPGEF3-208ENST00000476259 DENND2AQ9ULE3 1009 aa22.15■■□□□ 1.14
RAPGEF3-208ENST00000476259 LAMB1P07942 1786 aa22.15■■□□□ 1.14
RAPGEF3-208ENST00000476259 SEMA3EO15041 775 aa22.14■■□□□ 1.13
RAPGEF3-208ENST00000476259 G3BP1Q13283 466 aaKnown RBP eCLIP22.14■■□□□ 1.13
RAPGEF3-208ENST00000476259 NBPF12Q5TAG4 269 aaPredicted RBP22.14■■□□□ 1.13
RAPGEF3-208ENST00000476259 ZDHHC15Q96MV8 337 aa22.14■■□□□ 1.13
RAPGEF3-208ENST00000476259 MRIQ9BWK5 157 aa22.14■■□□□ 1.13
RAPGEF3-208ENST00000476259 C1orf115Q9H7X2 142 aa22.14■■□□□ 1.13
RAPGEF3-208ENST00000476259 TCP10L2B9ZVM9 353 aa22.13■■□□□ 1.13
RAPGEF3-208ENST00000476259 ZBTB7BO15156 539 aaPredicted RBP22.13■■□□□ 1.13
RAPGEF3-208ENST00000476259 PPP1R12BO60237 982 aaPredicted RBP22.13■■□□□ 1.13
RAPGEF3-208ENST00000476259 LDLRAD1Q5T700 205 aa22.13■■□□□ 1.13
RAPGEF3-208ENST00000476259 CSRNP1Q96S65 589 aa22.13■■□□□ 1.13
RAPGEF3-208ENST00000476259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.13■■□□□ 1.13
RAPGEF3-208ENST00000476259 PRDX5P30044 214 aa22.12■■□□□ 1.13
RAPGEF3-208ENST00000476259 TNNI2P48788 182 aa22.12■■□□□ 1.13
RAPGEF3-208ENST00000476259 ATP8B2P98198 1209 aa22.12■■□□□ 1.13
RAPGEF3-208ENST00000476259 POLA2Q14181 598 aa22.12■■□□□ 1.13
RAPGEF3-208ENST00000476259 MAP3K11Q16584 847 aa22.12■■□□□ 1.13
RAPGEF3-208ENST00000476259 HHIPL2Q6UWX4 724 aa22.12■■□□□ 1.13
RAPGEF3-208ENST00000476259 REM2Q8IYK8 340 aaPredicted RBP22.12■■□□□ 1.13
RAPGEF3-208ENST00000476259 XAGE2Q96GT9 111 aa22.12■■□□□ 1.13
RAPGEF3-208ENST00000476259 NEUROD6Q96NK8 337 aa22.12■■□□□ 1.13
RAPGEF3-208ENST00000476259 SALL1Q9NSC2 1324 aa22.11■■□□□ 1.13
RAPGEF3-208ENST00000476259 MVPQ14764 893 aaKnown RBP22.11■■□□□ 1.13
RAPGEF3-208ENST00000476259 PANK1Q8TE04 598 aa22.11■■□□□ 1.13
RAPGEF3-208ENST00000476259 SSH3Q8TE77 659 aa22.11■■□□□ 1.13
RAPGEF3-208ENST00000476259 AK9Q5TCS8 1911 aa22.11■■□□□ 1.13
RAPGEF3-208ENST00000476259 ZBTB22O15209 634 aa22.1■■□□□ 1.13
RAPGEF3-208ENST00000476259 LDHBP07195 334 aaKnown RBP22.1■■□□□ 1.13
RAPGEF3-208ENST00000476259 CACNB3P54284 484 aa22.1■■□□□ 1.13
RAPGEF3-208ENST00000476259 APOBEC3HQ6NTF7 200 aaKnown RBP22.1■■□□□ 1.13
RAPGEF3-208ENST00000476259 TMEM39BQ9GZU3 492 aa22.1■■□□□ 1.13
RAPGEF3-208ENST00000476259 SAGE1Q9NXZ1 904 aa22.1■■□□□ 1.13
RAPGEF3-208ENST00000476259 TMOD2Q9NZR1 351 aa22.1■■□□□ 1.13
RAPGEF3-208ENST00000476259 TRPA1O75762 1119 aa22.09■■□□□ 1.13
RAPGEF3-208ENST00000476259 IREB2P48200 963 aaKnown RBP22.09■■□□□ 1.13
RAPGEF3-208ENST00000476259 MKRN3Q13064 507 aaKnown RBP22.09■■□□□ 1.13
RAPGEF3-208ENST00000476259 RASGRF1Q13972 1273 aa22.09■■□□□ 1.13
RAPGEF3-208ENST00000476259 TEPSINQ96N21 525 aa22.09■■□□□ 1.13
RAPGEF3-208ENST00000476259 RNF186Q9NXI6 227 aa22.09■■□□□ 1.13
RAPGEF3-208ENST00000476259 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.09■■□□□ 1.13
RAPGEF3-208ENST00000476259 USP2O75604 605 aaPredicted RBP22.08■■□□□ 1.13
RAPGEF3-208ENST00000476259 MS4A1P11836 297 aa22.08■■□□□ 1.13
RAPGEF3-208ENST00000476259 OS9Q13438 667 aaPredicted RBP22.08■■□□□ 1.13
RAPGEF3-208ENST00000476259 DIXDC1Q155Q3 683 aa22.08■■□□□ 1.13
RAPGEF3-208ENST00000476259 CDAN1Q8IWY9 1227 aa22.08■■□□□ 1.13
RAPGEF3-208ENST00000476259 ZGPATQ8N5A5 531 aaKnown RBP22.08■■□□□ 1.13
RAPGEF3-208ENST00000476259 SLC10A4Q96EP9 437 aa22.08■■□□□ 1.13
RAPGEF3-208ENST00000476259 DAGLAQ9Y4D2 1042 aa22.08■■□□□ 1.13
RAPGEF3-208ENST00000476259 PDS5AQ29RF7 1337 aaKnown RBP22.07■■□□□ 1.12
RAPGEF3-208ENST00000476259 CAPN15O75808 1086 aa22.07■■□□□ 1.12
RAPGEF3-208ENST00000476259 GORABQ5T7V8 394 aa22.07■■□□□ 1.12
RAPGEF3-208ENST00000476259 CLMNQ96JQ2 1002 aa22.07■■□□□ 1.12
RAPGEF3-208ENST00000476259 UNCXA6NJT0 531 aa22.06■■□□□ 1.12
RAPGEF3-208ENST00000476259 SURF6O75683 361 aaKnown RBP22.06■■□□□ 1.12
RAPGEF3-208ENST00000476259 FKBP1CQ5VVH2 108 aa22.06■■□□□ 1.12
RAPGEF3-208ENST00000476259 SPRYD7Q5W111 196 aa22.06■■□□□ 1.12
RAPGEF3-208ENST00000476259 ABCF2Q9UG63 623 aa22.06■■□□□ 1.12
RAPGEF3-208ENST00000476259 RCAN3Q9UKA8 241 aa22.06■■□□□ 1.12
RAPGEF3-208ENST00000476259 FAM83AQ86UY5 434 aa22.05■■□□□ 1.12
RAPGEF3-208ENST00000476259 ANKRD13AQ8IZ07 590 aa22.05■■□□□ 1.12
RAPGEF3-208ENST00000476259 DOCK2Q92608 1830 aa22.04■■□□□ 1.12
RAPGEF3-208ENST00000476259 SREBF2Q12772 1141 aa22.04■■□□□ 1.12
RAPGEF3-208ENST00000476259 CEP85Q6P2H3 762 aa22.04■■□□□ 1.12
RAPGEF3-208ENST00000476259 GPR108Q9NPR9 543 aa22.04■■□□□ 1.12
RAPGEF3-208ENST00000476259 RPAP1Q9BWH6 1393 aaPredicted RBP22.03■■□□□ 1.12
RAPGEF3-208ENST00000476259 MYO5AQ9Y4I1 1855 aaKnown RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms