RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 GOLIM4O00461 696 aa11.9□□□□□ -0.5
TMEM254-211ENST00000476173 MAP4K4O95819 1239 aaPredicted RBP11.9□□□□□ -0.5
TMEM254-211ENST00000476173 TNIP1Q15025 636 aa11.9□□□□□ -0.5
TMEM254-211ENST00000476173 MFSD14BQ5SR56 506 aa11.9□□□□□ -0.5
TMEM254-211ENST00000476173 RSBN1LQ6PCB5 846 aaPredicted RBP11.9□□□□□ -0.5
TMEM254-211ENST00000476173 TIAM2Q8IVF5 1701 aa11.9□□□□□ -0.5
TMEM254-211ENST00000476173 CERS5Q8N5B7 392 aa11.9□□□□□ -0.5
TMEM254-211ENST00000476173 TBC1D22AQ8WUA7 517 aa11.9□□□□□ -0.5
TMEM254-211ENST00000476173 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
TMEM254-211ENST00000476173 PIH1D3Q9NQM4 214 aaKnown RBP11.9□□□□□ -0.5
TMEM254-211ENST00000476173 PAG1Q9NWQ8 432 aa11.9□□□□□ -0.5
TMEM254-211ENST00000476173 GSPT1P15170 499 aaKnown RBP11.89□□□□□ -0.51
TMEM254-211ENST00000476173 TTF1Q15361 905 aaPredicted RBP11.89□□□□□ -0.51
TMEM254-211ENST00000476173 GRIK5Q16478 980 aa11.89□□□□□ -0.51
TMEM254-211ENST00000476173 ZGPATQ8N5A5 531 aaKnown RBP11.89□□□□□ -0.51
TMEM254-211ENST00000476173 GMLQ99445 158 aa11.89□□□□□ -0.51
TMEM254-211ENST00000476173 MYO5AQ9Y4I1 1855 aaKnown RBP11.89□□□□□ -0.51
TMEM254-211ENST00000476173 PRDX5P30044 214 aa11.88□□□□□ -0.51
TMEM254-211ENST00000476173 GPC2Q8N158 579 aa11.88□□□□□ -0.51
TMEM254-211ENST00000476173 EVI5LQ96CN4 794 aa11.88□□□□□ -0.51
TMEM254-211ENST00000476173 FAM212AQ96EL1 285 aa11.88□□□□□ -0.51
TMEM254-211ENST00000476173 LRP2BPQ9P2M1 347 aa11.88□□□□□ -0.51
TMEM254-211ENST00000476173 ABCF2Q9UG63 623 aa11.88□□□□□ -0.51
TMEM254-211ENST00000476173 SUGT1Q9Y2Z0 365 aa11.88□□□□□ -0.51
TMEM254-211ENST00000476173 GJA3Q9Y6H8 435 aa11.88□□□□□ -0.51
TMEM254-211ENST00000476173 MYO3BQ8WXR4 1341 aa11.87□□□□□ -0.51
TMEM254-211ENST00000476173 TRIM6-TRIM34B2RNG4 842 aa11.87□□□□□ -0.51
TMEM254-211ENST00000476173 DDNO94850 711 aaPredicted RBP11.87□□□□□ -0.51
TMEM254-211ENST00000476173 LDHBP07195 334 aaKnown RBP11.87□□□□□ -0.51
TMEM254-211ENST00000476173 SDSP20132 328 aa11.87□□□□□ -0.51
TMEM254-211ENST00000476173 GMPSP49915 693 aaPredicted RBP11.87□□□□□ -0.51
TMEM254-211ENST00000476173 GSE1Q14687 1217 aa11.87□□□□□ -0.51
TMEM254-211ENST00000476173 BMP2KLQ5H9B9 411 aa11.87□□□□□ -0.51
TMEM254-211ENST00000476173 SPTY2D1Q68D10 685 aaPredicted RBP11.87□□□□□ -0.51
TMEM254-211ENST00000476173 ERICH6Q7L0X2 663 aa11.87□□□□□ -0.51
TMEM254-211ENST00000476173 KIAA0825Q8IV33 1275 aa11.87□□□□□ -0.51
TMEM254-211ENST00000476173 CNTROBQ8N137 903 aa11.87□□□□□ -0.51
TMEM254-211ENST00000476173 KBTBD3Q8NAB2 608 aa11.87□□□□□ -0.51
TMEM254-211ENST00000476173 AGBL3Q8NEM8 1001 aa11.87□□□□□ -0.51
TMEM254-211ENST00000476173 GLTPD2A6NH11 291 aa11.86□□□□□ -0.51
TMEM254-211ENST00000476173 IGSF3O75054 1194 aa11.86□□□□□ -0.51
TMEM254-211ENST00000476173 IDH1O75874 414 aaKnown RBP11.86□□□□□ -0.51
TMEM254-211ENST00000476173 RPS12P25398 132 aaKnown RBP11.86□□□□□ -0.51
TMEM254-211ENST00000476173 MECOMQ03112 1051 aa11.86□□□□□ -0.51
TMEM254-211ENST00000476173 MAP3K12Q12852 859 aa11.86□□□□□ -0.51
TMEM254-211ENST00000476173 DPY19L2Q6NUT2 758 aa11.86□□□□□ -0.51
TMEM254-211ENST00000476173 ZNF384Q8TF68 577 aa11.86□□□□□ -0.51
TMEM254-211ENST00000476173 DPF2Q92785 391 aa11.86□□□□□ -0.51
TMEM254-211ENST00000476173 RILPL2Q969X0 211 aa11.86□□□□□ -0.51
TMEM254-211ENST00000476173 RAI14Q9P0K7 980 aa11.86□□□□□ -0.51
TMEM254-211ENST00000476173 TTF2Q9UNY4 1162 aaKnown RBP11.86□□□□□ -0.51
TMEM254-211ENST00000476173 DOCK2Q92608 1830 aa11.86□□□□□ -0.51
TMEM254-211ENST00000476173 F8W031 263 aaPredicted RBP11.85□□□□□ -0.51
TMEM254-211ENST00000476173 USP17L8P0C7I0 530 aa11.85□□□□□ -0.51
TMEM254-211ENST00000476173 SCNN1DP51172 638 aa11.85□□□□□ -0.51
TMEM254-211ENST00000476173 SLC9C2Q5TAH2 1124 aa11.85□□□□□ -0.51
TMEM254-211ENST00000476173 DZIP1Q86YF9 867 aaKnown RBP11.85□□□□□ -0.51
TMEM254-211ENST00000476173 MAGEB6Q8N7X4 407 aa11.85□□□□□ -0.51
TMEM254-211ENST00000476173 NSUN4Q96CB9 384 aaKnown RBP11.85□□□□□ -0.51
TMEM254-211ENST00000476173 FSD1Q9BTV5 496 aa11.85□□□□□ -0.51
TMEM254-211ENST00000476173 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.85□□□□□ -0.51
TMEM254-211ENST00000476173 TCRBV5S4A2TA0A5A2 114 aa11.84□□□□□ -0.51
TMEM254-211ENST00000476173 SHTN1A0MZ66 631 aa11.84□□□□□ -0.51
TMEM254-211ENST00000476173 CHGBP05060 677 aa11.84□□□□□ -0.51
TMEM254-211ENST00000476173 PDE6AP16499 860 aa11.84□□□□□ -0.51
TMEM254-211ENST00000476173 ZNF280AP59817 542 aaPredicted RBP11.84□□□□□ -0.51
TMEM254-211ENST00000476173 HDLBPQ00341 1268 aaKnown RBP11.84□□□□□ -0.51
TMEM254-211ENST00000476173 SLFNL1Q499Z3 407 aa11.84□□□□□ -0.51
TMEM254-211ENST00000476173 NAA16Q6N069 864 aaPredicted RBP11.84□□□□□ -0.51
TMEM254-211ENST00000476173 TMED8Q6PL24 325 aaPredicted RBP11.84□□□□□ -0.51
TMEM254-211ENST00000476173 TICAM2Q86XR7 235 aa11.84□□□□□ -0.51
TMEM254-211ENST00000476173 L3MBTL3Q96JM7 780 aaPredicted RBP11.84□□□□□ -0.51
TMEM254-211ENST00000476173 MRIQ9BWK5 157 aa11.84□□□□□ -0.51
TMEM254-211ENST00000476173 GPRC5DQ9NZD1 345 aa11.84□□□□□ -0.51
TMEM254-211ENST00000476173 CNOT7Q9UIV1 285 aaKnown RBP11.84□□□□□ -0.51
TMEM254-211ENST00000476173 MYH7P12883 1935 aa11.84□□□□□ -0.51
TMEM254-211ENST00000476173 AK9Q5TCS8 1911 aa11.84□□□□□ -0.51
TMEM254-211ENST00000476173 MAST3O60307 1309 aa11.84□□□□□ -0.51
TMEM254-211ENST00000476173 RNF113AO15541 343 aaKnown RBP11.83□□□□□ -0.52
TMEM254-211ENST00000476173 ZFYP08048 801 aaPredicted RBP11.83□□□□□ -0.52
TMEM254-211ENST00000476173 CYP7A1P22680 504 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 ADD2P35612 726 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 CRKP46108 304 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 MMP14P50281 582 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 GSTO1P78417 241 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 UBE3CQ15386 1083 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 DIXDC1Q155Q3 683 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 ADGRA1Q86SQ6 560 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 OGFOD1Q8N543 542 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 FAM163AQ96GL9 167 aaPredicted RBP11.83□□□□□ -0.52
TMEM254-211ENST00000476173 SERPINA10Q9UK55 444 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 HDAC9Q9UKV0 1011 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 MYH2Q9UKX2 1941 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 GAKO14976 1311 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 ZNF532Q9HCE3 1301 aa11.83□□□□□ -0.52
TMEM254-211ENST00000476173 RFX7Q2KHR2 1363 aa11.82□□□□□ -0.52
TMEM254-211ENST00000476173 LRRFIP1Q32MZ4 808 aaKnown RBP11.82□□□□□ -0.52
TMEM254-211ENST00000476173 ZSCAN25Q6NSZ9 544 aa11.82□□□□□ -0.52
TMEM254-211ENST00000476173 HHIPL2Q6UWX4 724 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms