RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 PIF1Q9H611 641 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 FRRS1LQ9P0K9 344 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 STRIP2Q9ULQ0 834 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 SBNO2Q9Y2G9 1366 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 TLR3O15455 904 aaKnown RBP5.93□□□□□ -1.46
VPS13D-207ENST00000476169 MARCH6O60337 910 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 CLSTN1O94985 981 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 F13A1P00488 732 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 CDC27P30260 824 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 CRKP46108 304 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 CABP4P57796 275 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 IKBKEQ14164 716 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 BMS1Q14692 1282 aaKnown RBP5.93□□□□□ -1.46
VPS13D-207ENST00000476169 LRRC14Q15048 493 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 SEZ6Q53EL9 994 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 RASIP1Q5U651 963 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 DIEXFQ68CQ4 756 aaKnown RBP5.93□□□□□ -1.46
VPS13D-207ENST00000476169 GDF6Q6KF10 455 aaPredicted RBP5.93□□□□□ -1.46
VPS13D-207ENST00000476169 PSAPL1Q6NUJ1 521 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 ADAMTSL4Q6UY14 1074 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 BNC2Q6ZN30 1099 aaPredicted RBP5.93□□□□□ -1.46
VPS13D-207ENST00000476169 Q6ZNB5 142 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 FAM196AQ6ZSG2 479 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 CCDC84Q86UT8 332 aaPredicted RBP5.93□□□□□ -1.46
VPS13D-207ENST00000476169 FCHSD1Q86WN1 690 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 SULF2Q8IWU5 870 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 TRIM42Q8IWZ5 723 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 DDX54Q8TDD1 881 aaKnown RBP5.93□□□□□ -1.46
VPS13D-207ENST00000476169 JARID2Q92833 1246 aaPredicted RBP5.93□□□□□ -1.46
VPS13D-207ENST00000476169 OSBPL2Q9H1P3 480 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 CBX8Q9HC52 389 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 SH2B1Q9NRF2 756 aaPredicted RBP5.93□□□□□ -1.46
VPS13D-207ENST00000476169 MBIPQ9NS73 344 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 CYP8B1Q9UNU6 501 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 PCDHB5Q9Y5E4 795 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 ROBO2Q9HCK4 1378 aa5.93□□□□□ -1.46
VPS13D-207ENST00000476169 hCG_2014768A0A024R1R8 64 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 ELOA3CA0A087WX78 387 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-207ENST00000476169 ELOA3DA6NLF2 546 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-207ENST00000476169 RGS9O75916 674 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-207ENST00000476169 ESRRAP11474 423 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-207ENST00000476169 BMP6P22004 513 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 ALAS2P22557 587 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 ARNTP27540 789 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 SEPT6Q14141 434 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 ELOA3BQ3SY89 546 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 LLGL2Q6P1M3 1020 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 SLITRK4Q8IW52 837 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 ELOA3Q8NG57 546 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 MICAL1Q8TDZ2 1067 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 MDFIQ99750 246 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 EMILIN2Q9BXX0 1053 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 ZNF408Q9H9D4 720 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 GGA1Q9UJY5 639 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 MRVI1Q9Y6F6 885 aa5.92□□□□□ -1.46
VPS13D-207ENST00000476169 EPHA1P21709 976 aa5.91□□□□□ -1.46
VPS13D-207ENST00000476169 IBSPP21815 317 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-207ENST00000476169 IGBP1P78318 339 aa5.91□□□□□ -1.46
VPS13D-207ENST00000476169 CWF19L2Q2TBE0 894 aaKnown RBP5.91□□□□□ -1.46
VPS13D-207ENST00000476169 CACTIN-AS1Q8N1I8 211 aa5.91□□□□□ -1.46
VPS13D-207ENST00000476169 FBXO27Q8NI29 283 aa5.91□□□□□ -1.46
VPS13D-207ENST00000476169 STK35Q8TDR2 534 aa5.91□□□□□ -1.46
VPS13D-207ENST00000476169 NUDT8Q8WV74 236 aa5.91□□□□□ -1.46
VPS13D-207ENST00000476169 GATAD2BQ8WXI9 593 aa5.91□□□□□ -1.46
VPS13D-207ENST00000476169 TTC9Q92623 222 aa5.91□□□□□ -1.46
VPS13D-207ENST00000476169 ANAPC16Q96DE5 110 aa5.91□□□□□ -1.46
VPS13D-207ENST00000476169 SRRTQ9BXP5 876 aaKnown RBP5.91□□□□□ -1.46
VPS13D-207ENST00000476169 LRRC3Q9BY71 257 aa5.91□□□□□ -1.46
VPS13D-207ENST00000476169 NXF1Q9UBU9 619 aaKnown RBP5.91□□□□□ -1.46
VPS13D-207ENST00000476169 TBX22Q9Y458 520 aa5.91□□□□□ -1.46
VPS13D-207ENST00000476169 FAM221AA4D161 298 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 H3BRJ5 948 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 RAB11FIP3O75154 756 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 BPNT1O95861 308 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 CDC25BP30305 580 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 MCM4P33991 863 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 ETFBP38117 255 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 AP3B2Q13367 1082 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 MPP2Q14168 576 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 NBPF6Q5VWK0 638 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 EGFLAMQ63HQ2 1017 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 CCDC81Q6ZN84 652 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 ANKS3Q6ZW76 656 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 GPR161Q8N6U8 529 aaKnown RBP5.9□□□□□ -1.46
VPS13D-207ENST00000476169 GOLGA6L1Q8N7Z2 621 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 GRIN3AQ8TCU5 1115 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 NBPF4Q96M43 638 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 PPT2Q9UMR5 302 aa5.9□□□□□ -1.46
VPS13D-207ENST00000476169 IGF1RP08069 1367 aa5.9□□□□□ -1.47
VPS13D-207ENST00000476169 SOX1O00570 391 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-207ENST00000476169 CILPO75339 1184 aa5.89□□□□□ -1.47
VPS13D-207ENST00000476169 ANAPC15P60006 121 aa5.89□□□□□ -1.47
VPS13D-207ENST00000476169 PTPROQ16827 1216 aa5.89□□□□□ -1.47
VPS13D-207ENST00000476169 SLCO4C1Q6ZQN7 724 aa5.89□□□□□ -1.47
VPS13D-207ENST00000476169 DHX37Q8IY37 1157 aaKnown RBP5.89□□□□□ -1.47
VPS13D-207ENST00000476169 IL22RA1Q8N6P7 574 aa5.89□□□□□ -1.47
VPS13D-207ENST00000476169 SLC7A3Q8WY07 619 aa5.89□□□□□ -1.47
VPS13D-207ENST00000476169 GAL3ST3Q96A11 431 aa5.89□□□□□ -1.47
VPS13D-207ENST00000476169 MRFAP1L1Q96HT8 127 aa5.89□□□□□ -1.47
VPS13D-207ENST00000476169 FERD3LQ96RJ6 166 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms