RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 NFXL1Q6ZNB6 911 aa10.46□□□□□ -0.74
CCDC66-216ENST00000476142 CCDC144CPQ8IYA2 1237 aa10.46□□□□□ -0.74
CCDC66-216ENST00000476142 NKX2-3Q8TAU0 364 aa10.46□□□□□ -0.74
CCDC66-216ENST00000476142 CLSTN2Q9H4D0 955 aa10.46□□□□□ -0.74
CCDC66-216ENST00000476142 INCENPQ9NQS7 918 aa10.46□□□□□ -0.74
CCDC66-216ENST00000476142 HPS5Q9UPZ3 1129 aa10.46□□□□□ -0.74
CCDC66-216ENST00000476142 ZNF652Q9Y2D9 606 aa10.46□□□□□ -0.74
CCDC66-216ENST00000476142 TCRBV5S4A2TA0A5A2 114 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 POLR3DP05423 398 aaPredicted RBP10.45□□□□□ -0.74
CCDC66-216ENST00000476142 ME1P48163 572 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 CHRNDQ07001 517 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 ILDR2Q71H61 639 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 CYB5R4Q7L1T6 521 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 CCAR1Q8IX12 1150 aaKnown RBP10.45□□□□□ -0.74
CCDC66-216ENST00000476142 SMARCC1Q92922 1105 aaPredicted RBP10.45□□□□□ -0.74
CCDC66-216ENST00000476142 ZNF830Q96NB3 372 aaPredicted RBP10.45□□□□□ -0.74
CCDC66-216ENST00000476142 STRBPQ96SI9 672 aaKnown RBP10.45□□□□□ -0.74
CCDC66-216ENST00000476142 NAPBQ9H115 298 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 TOMM22Q9NS69 142 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 GJB4Q9NTQ9 266 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 MRVI1Q9Y6F6 885 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 GTF2E1P29083 439 aaPredicted RBP10.45□□□□□ -0.74
CCDC66-216ENST00000476142 ADD1P35611 737 aaKnown RBP10.45□□□□□ -0.74
CCDC66-216ENST00000476142 CTDSPL2Q05D32 466 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 ANO6Q4KMQ2 910 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 SASS6Q6UVJ0 657 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 MIGA1Q8NAN2 632 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 C8orf37Q96NL8 207 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 LRP2BPQ9P2M1 347 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 NWD2Q9ULI1 1742 aa10.45□□□□□ -0.74
CCDC66-216ENST00000476142 MYH3P11055 1940 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 EVCP57679 992 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 ERFEQ4G0M1 354 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 RRP12Q5JTH9 1297 aaKnown RBP10.44□□□□□ -0.74
CCDC66-216ENST00000476142 LUZP1Q86V48 1076 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 MICU3Q86XE3 530 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 FBXL16Q8N461 479 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 ANGEL1Q9UNK9 670 aaKnown RBP10.44□□□□□ -0.74
CCDC66-216ENST00000476142 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC66-216ENST00000476142 NEDD4P46934 1319 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 PHLPP1O60346 1717 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 PRKAB2O43741 272 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 METAP2P50579 478 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC66-216ENST00000476142 CCDC73Q6ZRK6 1079 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 LINC00116Q8NCU8 138 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 FAM200AQ8TCP9 573 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 ABCF2Q9UG63 623 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 WNK3Q9BYP7 1800 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 ATRNO75882 1429 aa10.44□□□□□ -0.74
CCDC66-216ENST00000476142 TDO2P48775 406 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 SF3A1Q15459 793 aaKnown RBP10.43□□□□□ -0.74
CCDC66-216ENST00000476142 TMEM67Q5HYA8 995 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 BARGINQ6ZT62 677 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 IFNL3Q8IZI9 196 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 SPC24Q8NBT2 197 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 NGLY1Q96IV0 654 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 MYL10Q9BUA6 226 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 SENP2Q9HC62 589 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 EPB41L4AQ9HCS5 686 aaPredicted RBP10.43□□□□□ -0.74
CCDC66-216ENST00000476142 PATL2C9JE40 543 aaKnown RBP10.43□□□□□ -0.74
CCDC66-216ENST00000476142 SH2B2O14492 632 aaPredicted RBP10.43□□□□□ -0.74
CCDC66-216ENST00000476142 AP5Z1O43299 807 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 C3orf67Q6ZVT6 689 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 LCORLQ8N3X6 602 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 CDC5LQ99459 802 aaKnown RBP10.43□□□□□ -0.74
CCDC66-216ENST00000476142 GOLPH3LQ9H4A5 285 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 RCOR1Q9UKL0 485 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 SLC4A4Q9Y6R1 1079 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 AKAP11Q9UKA4 1901 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 LTBP4Q8N2S1 1624 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 GYG1P46976 350 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 STK38Q15208 465 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 ANKRD18AQ8IVF6 992 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 FSIP1Q8NA03 581 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 PHKBQ93100 1093 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 DNAJC25Q9H1X3 360 aa10.43□□□□□ -0.74
CCDC66-216ENST00000476142 TTC12Q9H892 705 aaPredicted RBP10.43□□□□□ -0.74
CCDC66-216ENST00000476142 LRP5O75197 1615 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 ZMYM6O95789 1325 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 WDR19Q8NEZ3 1342 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 WTIPA6NIX2 430 aaPredicted RBP10.42□□□□□ -0.74
CCDC66-216ENST00000476142 ZNF500O60304 480 aaPredicted RBP10.42□□□□□ -0.74
CCDC66-216ENST00000476142 KINO60870 393 aaKnown RBP10.42□□□□□ -0.74
CCDC66-216ENST00000476142 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.42□□□□□ -0.74
CCDC66-216ENST00000476142 PTF1AQ7RTS3 328 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 VPS37DQ86XT2 251 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 AIFM3Q96NN9 605 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 NACAP1Q9BZK3 213 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 CBX8Q9HC52 389 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 RAI14Q9P0K7 980 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 IFIT3O14879 490 aaKnown RBP10.42□□□□□ -0.74
CCDC66-216ENST00000476142 ZBTB43O43298 467 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 CYP7A1P22680 504 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 GNL2Q13823 731 aaKnown RBP10.42□□□□□ -0.74
CCDC66-216ENST00000476142 APOA5Q6Q788 366 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 CCDC24Q8N4L8 307 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 FBXO18Q8NFZ0 1043 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 FBXW7Q969H0 707 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 ZKSCAN3Q9BRR0 538 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 CLIC4Q9Y696 253 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms