RNA–Protein interactions for RNA: ENST00000476041.1

LSM10-202, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-202ENST00000476041 ZNF70Q9UC06 446 aaPredicted RBP17.61■□□□□ 0.41
LSM10-202ENST00000476041 FBXO3Q9UK99 471 aa17.61■□□□□ 0.41
LSM10-202ENST00000476041 FRAT2O75474 233 aaPredicted RBP17.6■□□□□ 0.41
LSM10-202ENST00000476041 SOX10P56693 466 aa17.6■□□□□ 0.41
LSM10-202ENST00000476041 SREBF2Q12772 1141 aa17.6■□□□□ 0.41
LSM10-202ENST00000476041 MKRN3Q13064 507 aaKnown RBP17.6■□□□□ 0.41
LSM10-202ENST00000476041 CHAF1AQ13111 956 aaPredicted RBP17.6■□□□□ 0.41
LSM10-202ENST00000476041 NBPF12Q5TAG4 269 aaPredicted RBP17.6■□□□□ 0.41
LSM10-202ENST00000476041 ARHGAP45Q92619 1136 aa17.6■□□□□ 0.41
LSM10-202ENST00000476041 TDRD3Q9H7E2 651 aaKnown RBP17.6■□□□□ 0.41
LSM10-202ENST00000476041 HDAC5Q9UQL6 1122 aa17.6■□□□□ 0.41
LSM10-202ENST00000476041 LAMB1P07942 1786 aa17.6■□□□□ 0.41
LSM10-202ENST00000476041 CIAO1O76071 339 aa17.59■□□□□ 0.41
LSM10-202ENST00000476041 LPIN2Q92539 896 aa17.59■□□□□ 0.41
LSM10-202ENST00000476041 SUGT1Q9Y2Z0 365 aa17.59■□□□□ 0.41
LSM10-202ENST00000476041 LRRFIP2Q9Y608 721 aaKnown RBP17.59■□□□□ 0.41
LSM10-202ENST00000476041 USP2O75604 605 aaPredicted RBP17.58■□□□□ 0.4
LSM10-202ENST00000476041 SLC5A1P13866 664 aa17.58■□□□□ 0.4
LSM10-202ENST00000476041 NOM1Q5C9Z4 860 aaKnown RBP17.58■□□□□ 0.4
LSM10-202ENST00000476041 SLC10A4Q96EP9 437 aa17.58■□□□□ 0.4
LSM10-202ENST00000476041 CLMNQ96JQ2 1002 aa17.58■□□□□ 0.4
LSM10-202ENST00000476041 MRIQ9BWK5 157 aa17.58■□□□□ 0.4
LSM10-202ENST00000476041 CFHR5Q9BXR6 569 aa17.58■□□□□ 0.4
LSM10-202ENST00000476041 MYH13Q9UKX3 1938 aa17.58■□□□□ 0.4
LSM10-202ENST00000476041 ZBTB48P10074 688 aaPredicted RBP17.57■□□□□ 0.4
LSM10-202ENST00000476041 IREB2P48200 963 aaKnown RBP17.57■□□□□ 0.4
LSM10-202ENST00000476041 INTS3Q68E01 1043 aaKnown RBP17.57■□□□□ 0.4
LSM10-202ENST00000476041 TEKT1Q969V4 418 aa17.57■□□□□ 0.4
LSM10-202ENST00000476041 WNK4Q96J92 1243 aa17.57■□□□□ 0.4
LSM10-202ENST00000476041 TEPSINQ96N21 525 aa17.57■□□□□ 0.4
LSM10-202ENST00000476041 MEIS3Q99687 375 aa17.57■□□□□ 0.4
LSM10-202ENST00000476041 MAST3O60307 1309 aa17.56■□□□□ 0.4
LSM10-202ENST00000476041 MANSC4A6NHS7 340 aaPredicted RBP17.56■□□□□ 0.4
LSM10-202ENST00000476041 TBC1D8O95759 1140 aa17.56■□□□□ 0.4
LSM10-202ENST00000476041 INHBEP58166 350 aa17.56■□□□□ 0.4
LSM10-202ENST00000476041 CTU1Q7Z7A3 348 aaKnown RBP17.56■□□□□ 0.4
LSM10-202ENST00000476041 ZDHHC15Q96MV8 337 aa17.56■□□□□ 0.4
LSM10-202ENST00000476041 SIL1Q9H173 461 aa17.56■□□□□ 0.4
LSM10-202ENST00000476041 CEP126Q9P2H0 1117 aa17.56■□□□□ 0.4
LSM10-202ENST00000476041 OTOFQ9HC10 1997 aa17.56■□□□□ 0.4
LSM10-202ENST00000476041 TCP10L2B9ZVM9 353 aa17.55■□□□□ 0.4
LSM10-202ENST00000476041 IL15P40933 162 aaPredicted RBP17.55■□□□□ 0.4
LSM10-202ENST00000476041 TNNI2P48788 182 aa17.55■□□□□ 0.4
LSM10-202ENST00000476041 ATP2B3Q16720 1220 aa17.55■□□□□ 0.4
LSM10-202ENST00000476041 ANKRD13AQ8IZ07 590 aa17.55■□□□□ 0.4
LSM10-202ENST00000476041 WDR66Q8TBY9 1149 aa17.55■□□□□ 0.4
LSM10-202ENST00000476041 ZNF296Q8WUU4 475 aaPredicted RBP17.55■□□□□ 0.4
LSM10-202ENST00000476041 COPRSQ9NQ92 184 aa17.55■□□□□ 0.4
LSM10-202ENST00000476041 GPR25O00155 361 aa17.54■□□□□ 0.4
LSM10-202ENST00000476041 ALDH1A1P00352 501 aa17.54■□□□□ 0.4
LSM10-202ENST00000476041 HHIPL2Q6UWX4 724 aa17.54■□□□□ 0.4
LSM10-202ENST00000476041 CDAN1Q8IWY9 1227 aa17.54■□□□□ 0.4
LSM10-202ENST00000476041 TMEM39BQ9GZU3 492 aa17.54■□□□□ 0.4
LSM10-202ENST00000476041 PA2G4Q9UQ80 394 aaKnown RBP17.54■□□□□ 0.4
LSM10-202ENST00000476041 ZBTB22O15209 634 aa17.53■□□□□ 0.4
LSM10-202ENST00000476041 IPO8O15397 1037 aaKnown RBP17.53■□□□□ 0.4
LSM10-202ENST00000476041 GNAI3P08754 354 aa17.53■□□□□ 0.4
LSM10-202ENST00000476041 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
LSM10-202ENST00000476041 APOBEC3HQ6NTF7 200 aaKnown RBP17.53■□□□□ 0.4
LSM10-202ENST00000476041 IFNL1Q8IU54 200 aa17.53■□□□□ 0.4
LSM10-202ENST00000476041 TRIM27P14373 513 aa17.52■□□□□ 0.4
LSM10-202ENST00000476041 GJA5P36382 358 aa17.52■□□□□ 0.4
LSM10-202ENST00000476041 MTX1Q13505 466 aa17.52■□□□□ 0.4
LSM10-202ENST00000476041 FAM83AQ86UY5 434 aa17.52■□□□□ 0.4
LSM10-202ENST00000476041 GNL3LQ9NVN8 582 aaKnown RBP17.52■□□□□ 0.4
LSM10-202ENST00000476041 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.52■□□□□ 0.4
LSM10-202ENST00000476041 IGF2BP3O00425 579 aaKnown RBP eCLIP17.51■□□□□ 0.39
LSM10-202ENST00000476041 SEMA3EO15041 775 aa17.51■□□□□ 0.39
LSM10-202ENST00000476041 CACNB3P54284 484 aa17.51■□□□□ 0.39
LSM10-202ENST00000476041 PKN2Q16513 984 aaKnown RBP17.51■□□□□ 0.39
LSM10-202ENST00000476041 ATF7IPQ6VMQ6 1270 aa17.51■□□□□ 0.39
LSM10-202ENST00000476041 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.51■□□□□ 0.39
LSM10-202ENST00000476041 R3HDMLQ9H3Y0 253 aa17.51■□□□□ 0.39
LSM10-202ENST00000476041 TMOD2Q9NZR1 351 aa17.51■□□□□ 0.39
LSM10-202ENST00000476041 SALL1Q9NSC2 1324 aa17.5■□□□□ 0.39
LSM10-202ENST00000476041 BCAR3O75815 825 aa17.5■□□□□ 0.39
LSM10-202ENST00000476041 PHKA1P46020 1223 aa17.5■□□□□ 0.39
LSM10-202ENST00000476041 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.5■□□□□ 0.39
LSM10-202ENST00000476041 OPTNQ96CV9 577 aa17.5■□□□□ 0.39
LSM10-202ENST00000476041 DENND2AQ9ULE3 1009 aa17.5■□□□□ 0.39
LSM10-202ENST00000476041 RPAP1Q9BWH6 1393 aaPredicted RBP17.5■□□□□ 0.39
LSM10-202ENST00000476041 TESPA1A2RU30 521 aaPredicted RBP17.49■□□□□ 0.39
LSM10-202ENST00000476041 SRGAP3O43295 1099 aa17.49■□□□□ 0.39
LSM10-202ENST00000476041 FKTNO75072 461 aa17.49■□□□□ 0.39
LSM10-202ENST00000476041 PRDX5P30044 214 aa17.49■□□□□ 0.39
LSM10-202ENST00000476041 MAP3K9P80192 1104 aa17.49■□□□□ 0.39
LSM10-202ENST00000476041 ELP3Q9H9T3 547 aa17.49■□□□□ 0.39
LSM10-202ENST00000476041 DAGLAQ9Y4D2 1042 aa17.49■□□□□ 0.39
LSM10-202ENST00000476041 ADORA1P30542 326 aa17.48■□□□□ 0.39
LSM10-202ENST00000476041 VGLL4Q14135 290 aa17.48■□□□□ 0.39
LSM10-202ENST00000476041 CCDC102BQ68D86 513 aa17.48■□□□□ 0.39
LSM10-202ENST00000476041 MIER1Q8N108 512 aa17.48■□□□□ 0.39
LSM10-202ENST00000476041 FRAT1Q92837 279 aaPredicted RBP17.48■□□□□ 0.39
LSM10-202ENST00000476041 TNNQ9UQP3 1299 aa17.48■□□□□ 0.39
LSM10-202ENST00000476041 LDHBP07195 334 aaKnown RBP17.47■□□□□ 0.39
LSM10-202ENST00000476041 DIXDC1Q155Q3 683 aa17.47■□□□□ 0.39
LSM10-202ENST00000476041 OTUD7BQ6GQQ9 843 aa17.47■□□□□ 0.39
LSM10-202ENST00000476041 HOOK2Q96ED9 719 aa17.47■□□□□ 0.39
LSM10-202ENST00000476041 MS4A4AQ96JQ5 239 aa17.47■□□□□ 0.39
LSM10-202ENST00000476041 PTPN18Q99952 460 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms