RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 TSC1Q92574 1164 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 CCDC97Q96F63 343 aaPredicted RBP6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 SCLT1Q96NL6 688 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 VCX3BQ9H321 246 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 PRDM11Q9NQV5 511 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 CNNM1Q9NRU3 951 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 IKBKGQ9Y6K9 419 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 MAP2P11137 1827 aaKnown RBP6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 DIP2CQ9Y2E4 1556 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 PRAMEF22A3QJZ6 481 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 CCDC69A6NI79 296 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 ATP2C2O75185 946 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 ZWINTO95229 277 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 LARGE1O95461 756 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 POLR3DP05423 398 aaPredicted RBP6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 MAP2K2P36507 400 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 TERF1P54274 439 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 SEPT14Q6ZU15 432 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 RPUSD2Q8IZ73 545 aaKnown RBP6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 PPP1R14CQ8TAE6 165 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 NUP88Q99567 741 aaPredicted RBP6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 TM6SF1Q9BZW5 370 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 TPCN1Q9ULQ1 816 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 KAT6BQ8WYB5 2073 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 ADGRB2O60241 1585 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 A0A0D9SFI3 127 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 RPS6KB1P23443 525 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 TIMM10P62072 90 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 SETDB1Q15047 1291 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 TSNAXIP1Q2TAA8 658 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 ZSCAN25Q6NSZ9 544 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 ZNF790Q6PG37 636 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 CABLES1Q8TDN4 633 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 GOLGA1Q92805 767 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 TSNARE1Q96NA8 513 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 MRVI1Q9Y6F6 885 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 BIN1O00499 593 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 IKQ13123 557 aaPredicted RBP6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 DBNDD2Q9BQY9 259 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 ZSWIM6Q9HCJ5 1215 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 MKRN1Q9UHC7 482 aaKnown RBP6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 ARHGEF28Q8N1W1 1705 aaKnown RBP6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 A0A1W2PRG0 241 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 ATP6V1AP38606 617 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 ZBTB16Q05516 673 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 KIAA0753Q2KHM9 967 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 CPLX4Q7Z7G2 160 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 C8orf76Q96K31 380 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 PYM1Q9BRP8 204 aaKnown RBP6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 IQCGQ9H095 443 aaKnown RBP6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 ZSCAN16Q9H4T2 348 aaPredicted RBP6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 FRMPD1Q5SYB0 1578 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 JAK2O60674 1132 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 IDH1O75874 414 aaKnown RBP6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 APOBRQ0VD83 1088 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 WHAMMP3Q1A5X7 153 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 TDRD12Q587J7 1177 aaKnown RBP6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 TMC6Q7Z403 805 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 TTC6Q86TZ1 520 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 PIBF1Q8WXW3 757 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 SAMD15Q9P1V8 674 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 CRB1P82279 1406 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 CASQ2O14958 399 aaPredicted RBP6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 ARHGAP25P42331 645 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 POLA2Q14181 598 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 DZIP1Q86YF9 867 aaKnown RBP6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 STMN2Q93045 179 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 PDLIM2Q96JY6 352 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 IL25Q9H293 177 aa6.93□□□□□ -1.3
HNRNPU-208ENST00000475997 ARID4AP29374 1257 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 PCK1P35558 622 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 ATP11AP98196 1134 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 GCKRQ14397 625 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 ISM2Q6H9L7 571 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 CCDC174Q6PII3 467 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 ZNF496Q96IT1 587 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 JADE2Q9NQC1 790 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 TLR7Q9NYK1 1049 aaKnown RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 KIF6Q6ZMV9 814 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 FAM76AQ8TAV0 307 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 LEO1Q8WVC0 666 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 CTNNBL1Q8WYA6 563 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 SEC62Q99442 399 aaKnown RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 FERMT1Q9BQL6 677 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 TRIM7Q9C029 511 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 CWC25Q9NXE8 425 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 ORC3Q9UBD5 711 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 RASAL2Q9UJF2 1139 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 USP16Q9Y5T5 823 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 ALDH3A1P30838 453 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 ACTN2P35609 894 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 PRPHP41219 470 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 RBBP5Q15291 538 aaKnown RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 CCDC38Q502W7 563 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 GBP7Q8N8V2 638 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 MAP4K1Q92918 833 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 RABGAP1Q9Y3P9 1069 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 PLEKHG1Q9ULL1 1385 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 USP32Q8NFA0 1604 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 GOLGA8BA8MQT2 603 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms