RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SMAP1Q8IYB5 467 aaPredicted RBP8.13□□□□□ -1.11
UBR4-212ENST00000475973 SLAIN1Q8ND83 568 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 TDRD7Q8NHU6 1098 aaKnown RBP8.13□□□□□ -1.11
UBR4-212ENST00000475973 SMARCC2Q8TAQ2 1214 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 PRDM4Q9UKN5 801 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 TPCN1Q9ULQ1 816 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 CYP46A1Q9Y6A2 500 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.13□□□□□ -1.11
UBR4-212ENST00000475973 GOLGB1Q14789 3259 aaKnown RBP8.12□□□□□ -1.11
UBR4-212ENST00000475973 GRM8O00222 908 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 MAP3K7O43318 606 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 TAF5LO75529 589 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 CAVIN2O95810 425 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 IGKV5-2P06315 115 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 SNRPA1P09661 255 aaKnown RBP8.12□□□□□ -1.11
UBR4-212ENST00000475973 HCLS1P14317 486 aaPredicted RBP8.12□□□□□ -1.11
UBR4-212ENST00000475973 ATP5JP18859 108 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 CASTP20810 708 aaKnown RBP8.12□□□□□ -1.11
UBR4-212ENST00000475973 PDCP20941 246 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 PSMA5P28066 241 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 CDC25BP30305 580 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 CHRNA5P30532 468 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 ADD1P35611 737 aaKnown RBP8.12□□□□□ -1.11
UBR4-212ENST00000475973 CASP7P55210 303 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 DNM1Q05193 864 aaKnown RBP8.12□□□□□ -1.11
UBR4-212ENST00000475973 COL9A3Q14050 684 aaPredicted RBP8.12□□□□□ -1.11
UBR4-212ENST00000475973 TYW1BQ6NUM6 668 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 SARM1Q6SZW1 724 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 BICDL1Q6ZP65 573 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 PLA2G4DQ86XP0 818 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 RNF214Q8ND24 703 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 FAM200AQ8TCP9 573 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 ANKRD7Q92527 254 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 SUCLG2Q96I99 432 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 ZMYND15Q9H091 742 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 CDHR5Q9HBB8 845 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 ZNF652Q9Y2D9 606 aa8.12□□□□□ -1.11
UBR4-212ENST00000475973 RBM8AQ9Y5S9 174 aaKnown RBP8.12□□□□□ -1.11
UBR4-212ENST00000475973 CHD4Q14839 1912 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 H0YIN7 160 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 KCNA3P22001 575 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 EVCP57679 992 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 ST5P78524 1137 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 RESTQ13127 1097 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 NMIQ13287 307 aaPredicted RBP8.11□□□□□ -1.11
UBR4-212ENST00000475973 C9orf131Q5VYM1 1079 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 CWC27Q6UX04 472 aaKnown RBP8.11□□□□□ -1.11
UBR4-212ENST00000475973 DZIP3Q86Y13 1208 aaKnown RBP8.11□□□□□ -1.11
UBR4-212ENST00000475973 C2CD5Q86YS7 1000 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 CCDC83Q8IWF9 413 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 CNBD1Q8NA66 436 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 SP7Q8TDD2 431 aaPredicted RBP8.11□□□□□ -1.11
UBR4-212ENST00000475973 FBXW7Q969H0 707 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 SETDB2Q96T68 719 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 SCAND2PQ9GZW5 306 aaPredicted RBP8.11□□□□□ -1.11
UBR4-212ENST00000475973 BCL2L12Q9HB09 334 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 DDX19AQ9NUU7 478 aaKnown RBP8.11□□□□□ -1.11
UBR4-212ENST00000475973 RNF181Q9P0P0 153 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 MAP3K2Q9Y2U5 619 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 MRVI1Q9Y6F6 885 aa8.11□□□□□ -1.11
UBR4-212ENST00000475973 ZC3H4Q9UPT8 1303 aaKnown RBP8.1□□□□□ -1.11
UBR4-212ENST00000475973 CPA1P15085 419 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 PDE6BP35913 854 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 TTLL12Q14166 644 aaPredicted RBP8.1□□□□□ -1.11
UBR4-212ENST00000475973 PROSER3Q2NL68 480 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 UTP14CQ5TAP6 766 aaKnown RBP8.1□□□□□ -1.11
UBR4-212ENST00000475973 FOXD4L5Q5VV16 416 aaPredicted RBP8.1□□□□□ -1.11
UBR4-212ENST00000475973 TBC1D9BQ66K14 1250 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 ATL3Q6DD88 541 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 PRPF40BQ6NWY9 871 aaKnown RBP8.1□□□□□ -1.11
UBR4-212ENST00000475973 TTLL6Q8N841 843 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 FOXD4L4Q8WXT5 416 aaPredicted RBP8.1□□□□□ -1.11
UBR4-212ENST00000475973 GPATCH3Q96I76 525 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 PGBD1Q96JS3 809 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 JAKMIP1Q96N16 626 aaKnown RBP8.1□□□□□ -1.11
UBR4-212ENST00000475973 LLPHQ9BRT6 129 aaKnown RBP8.1□□□□□ -1.11
UBR4-212ENST00000475973 CCDC94Q9BW85 323 aaPredicted RBP8.1□□□□□ -1.11
UBR4-212ENST00000475973 CLSTN2Q9H4D0 955 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 GPR108Q9NPR9 543 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 DIAPH3Q9NSV4 1193 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 RCOR1Q9UKL0 485 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 TBC1D2BQ9UPU7 963 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 KIF13BQ9NQT8 1826 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 UBR2Q8IWV8 1755 aa8.1□□□□□ -1.11
UBR4-212ENST00000475973 SALL1Q9NSC2 1324 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 SCN7AQ01118 1682 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 A0A0D9SFI3 127 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 NEURL1BA8MQ27 555 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 CAMTA2O94983 1202 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 MAP4K4O95819 1239 aaPredicted RBP8.09□□□□□ -1.11
UBR4-212ENST00000475973 A1BGP04217 495 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 CCDC192P0DO97 292 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 ZKSCAN1P17029 563 aaPredicted RBP8.09□□□□□ -1.11
UBR4-212ENST00000475973 LIG1P18858 919 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 KRT85P78386 507 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 PTPN12Q05209 780 aaKnown RBP8.09□□□□□ -1.11
UBR4-212ENST00000475973 TYRO3Q06418 890 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 KRT32Q14532 448 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 IQCB1Q15051 598 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 TSR1Q2NL82 804 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms