RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CHMP3Q9Y3E7 222 aa8.58□□□□□ -1.04
SHQ1-207ENST00000475558 TTC41PQ6P2S7 1318 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 EYA2O00167 538 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 IGHMBP2P38935 993 aaKnown RBP8.57□□□□□ -1.04
SHQ1-207ENST00000475558 RGS3P49796 1198 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 PTPN12Q05209 780 aaKnown RBP8.57□□□□□ -1.04
SHQ1-207ENST00000475558 LDHAL6AQ6ZMR3 332 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 DDX46Q7L014 1031 aaKnown RBP8.57□□□□□ -1.04
SHQ1-207ENST00000475558 TMC4Q7Z404 712 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 USP48Q86UV5 1035 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 SLC51AQ86UW1 340 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 IL27Q8NEV9 243 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 TRPM4Q8TD43 1214 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 DPF2Q92785 391 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 MPHOSPH8Q99549 860 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 SAGE1Q9NXZ1 904 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 EXOC6BQ9Y2D4 811 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 RTL9Q8NET4 1388 aa8.57□□□□□ -1.04
SHQ1-207ENST00000475558 MROH5Q6ZUA9 1318 aa8.56□□□□□ -1.04
SHQ1-207ENST00000475558 IGSF3O75054 1194 aa8.56□□□□□ -1.04
SHQ1-207ENST00000475558 GLRX3O76003 335 aaKnown RBP8.56□□□□□ -1.04
SHQ1-207ENST00000475558 RFX5P48382 616 aaPredicted RBP8.56□□□□□ -1.04
SHQ1-207ENST00000475558 GRAPQ13588 217 aa8.56□□□□□ -1.04
SHQ1-207ENST00000475558 LRRFIP1Q32MZ4 808 aaKnown RBP8.56□□□□□ -1.04
SHQ1-207ENST00000475558 RGMBQ6NW40 437 aa8.56□□□□□ -1.04
SHQ1-207ENST00000475558 PLEKHM2Q8IWE5 1019 aa8.56□□□□□ -1.04
SHQ1-207ENST00000475558 EFCAB3Q8N7B9 438 aa8.56□□□□□ -1.04
SHQ1-207ENST00000475558 C2orf69Q8N8R5 385 aa8.56□□□□□ -1.04
SHQ1-207ENST00000475558 GRAPLQ8TC17 118 aaPredicted RBP8.56□□□□□ -1.04
SHQ1-207ENST00000475558 UPF2Q9HAU5 1272 aaKnown RBP8.56□□□□□ -1.04
SHQ1-207ENST00000475558 DAXXQ9UER7 740 aaPredicted RBP8.56□□□□□ -1.04
SHQ1-207ENST00000475558 MX1P20591 662 aa8.55□□□□□ -1.04
SHQ1-207ENST00000475558 ITGA6P23229 1130 aa8.55□□□□□ -1.04
SHQ1-207ENST00000475558 PDE4AP27815 886 aa8.55□□□□□ -1.04
SHQ1-207ENST00000475558 PDE1AP54750 535 aa8.55□□□□□ -1.04
SHQ1-207ENST00000475558 EPHA10Q5JZY3 1008 aa8.55□□□□□ -1.04
SHQ1-207ENST00000475558 KRT26Q7Z3Y9 468 aa8.55□□□□□ -1.04
SHQ1-207ENST00000475558 MICALL2Q8IY33 904 aa8.55□□□□□ -1.04
SHQ1-207ENST00000475558 DCPSQ96C86 337 aaKnown RBP8.55□□□□□ -1.04
SHQ1-207ENST00000475558 ZIC5Q96T25 663 aa8.55□□□□□ -1.04
SHQ1-207ENST00000475558 GBA2Q9HCG7 927 aaPredicted RBP8.55□□□□□ -1.04
SHQ1-207ENST00000475558 CNNM1Q9NRU3 951 aa8.55□□□□□ -1.04
SHQ1-207ENST00000475558 ECHDC1Q9NTX5 307 aa8.55□□□□□ -1.04
SHQ1-207ENST00000475558 POLR2AP24928 1970 aaKnown RBP8.55□□□□□ -1.04
SHQ1-207ENST00000475558 ANKRD36CQ5JPF3 1778 aa8.54□□□□□ -1.04
SHQ1-207ENST00000475558 YDJCA8MPS7 323 aa8.54□□□□□ -1.04
SHQ1-207ENST00000475558 FAM155AB1AL88 458 aaPredicted RBP8.54□□□□□ -1.04
SHQ1-207ENST00000475558 HIP1O00291 1037 aa8.54□□□□□ -1.04
SHQ1-207ENST00000475558 EPB41L2O43491 1005 aaKnown RBP8.54□□□□□ -1.04
SHQ1-207ENST00000475558 HCLS1P14317 486 aaPredicted RBP8.54□□□□□ -1.04
SHQ1-207ENST00000475558 RPS12P25398 132 aaKnown RBP8.54□□□□□ -1.04
SHQ1-207ENST00000475558 ZNF157P51786 506 aaPredicted RBP8.54□□□□□ -1.04
SHQ1-207ENST00000475558 RPS8P62241 208 aaKnown RBP8.54□□□□□ -1.04
SHQ1-207ENST00000475558 KIF23Q02241 960 aaPredicted RBP8.54□□□□□ -1.04
SHQ1-207ENST00000475558 WASHC4Q2M389 1173 aa8.54□□□□□ -1.04
SHQ1-207ENST00000475558 RTL5Q5HYW3 569 aaPredicted RBP8.54□□□□□ -1.04
SHQ1-207ENST00000475558 CCDC158Q5M9N0 1113 aa8.54□□□□□ -1.04
SHQ1-207ENST00000475558 ANKRD18AQ8IVF6 992 aa8.54□□□□□ -1.04
SHQ1-207ENST00000475558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.54□□□□□ -1.04
SHQ1-207ENST00000475558 BACH2Q9BYV9 841 aa8.54□□□□□ -1.04
SHQ1-207ENST00000475558 ANKRD2Q9GZV1 360 aa8.54□□□□□ -1.04
SHQ1-207ENST00000475558 BSDC1Q9NW68 430 aaPredicted RBP8.54□□□□□ -1.04
SHQ1-207ENST00000475558 RIPOR2Q9Y4F9 1068 aa8.54□□□□□ -1.04
SHQ1-207ENST00000475558 AKAP11Q9UKA4 1901 aa8.54□□□□□ -1.04
SHQ1-207ENST00000475558 SHTN1A0MZ66 631 aa8.53□□□□□ -1.04
SHQ1-207ENST00000475558 PSMD14O00487 310 aa8.53□□□□□ -1.04
SHQ1-207ENST00000475558 TRPA1O75762 1119 aa8.53□□□□□ -1.04
SHQ1-207ENST00000475558 SASH1O94885 1247 aa8.53□□□□□ -1.04
SHQ1-207ENST00000475558 TBC1D10BQ4KMP7 808 aaPredicted RBP8.53□□□□□ -1.04
SHQ1-207ENST00000475558 GORABQ5T7V8 394 aa8.53□□□□□ -1.04
SHQ1-207ENST00000475558 TTC22Q5TAA0 569 aa8.53□□□□□ -1.04
SHQ1-207ENST00000475558 TMED8Q6PL24 325 aaPredicted RBP8.53□□□□□ -1.04
SHQ1-207ENST00000475558 SAMD7Q7Z3H4 446 aa8.53□□□□□ -1.04
SHQ1-207ENST00000475558 AACSQ86V21 672 aa8.53□□□□□ -1.04
SHQ1-207ENST00000475558 JARID2Q92833 1246 aaPredicted RBP8.53□□□□□ -1.04
SHQ1-207ENST00000475558 ZNF512BQ96KM6 892 aaPredicted RBP8.53□□□□□ -1.04
SHQ1-207ENST00000475558 RNF186Q9NXI6 227 aa8.53□□□□□ -1.04
SHQ1-207ENST00000475558 C6orf229H3BNL8 230 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 APBB1O00213 710 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 TNRC18O15417 2968 aaPredicted RBP8.52□□□□□ -1.05
SHQ1-207ENST00000475558 PDE8BO95263 885 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 IFIT1P09914 478 aaKnown RBP8.52□□□□□ -1.05
SHQ1-207ENST00000475558 UQCRFS1P1P0C7P4 283 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 ATP5JP18859 108 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 SOX10P56693 466 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 UBE4AQ14139 1066 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 TNNI3KQ59H18 835 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 METTL24Q5JXM2 366 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 RBM26Q5T8P6 1007 aaKnown RBP8.52□□□□□ -1.05
SHQ1-207ENST00000475558 DLK2Q6UY11 383 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 ATG9AQ7Z3C6 839 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 CTU1Q7Z7A3 348 aaKnown RBP8.52□□□□□ -1.05
SHQ1-207ENST00000475558 SULF1Q8IWU6 871 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 RUFY2Q8WXA3 655 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 LPIN2Q92539 896 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 EVI5LQ96CN4 794 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 CSRNP1Q96S65 589 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 EYA3Q99504 573 aa8.52□□□□□ -1.05
SHQ1-207ENST00000475558 SIL1Q9H173 461 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms