RNA–Protein interactions for RNA: ENST00000475353.1

RAF1-209, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 4

Gene RAF1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-209ENST00000475353 SIL1Q9H173 461 aa13.18□□□□□ -0.3
RAF1-209ENST00000475353 LRRFIP2Q9Y608 721 aaKnown RBP13.18□□□□□ -0.3
RAF1-209ENST00000475353 TCP10L2B9ZVM9 353 aa13.17□□□□□ -0.3
RAF1-209ENST00000475353 USP2O75604 605 aaPredicted RBP13.17□□□□□ -0.3
RAF1-209ENST00000475353 SLC5A1P13866 664 aa13.17□□□□□ -0.3
RAF1-209ENST00000475353 MEIS3Q99687 375 aa13.17□□□□□ -0.3
RAF1-209ENST00000475353 MYH13Q9UKX3 1938 aa13.17□□□□□ -0.3
RAF1-209ENST00000475353 KIF16BQ96L93 1317 aa13.16□□□□□ -0.3
RAF1-209ENST00000475353 HDLBPQ00341 1268 aaKnown RBP13.16□□□□□ -0.3
RAF1-209ENST00000475353 SREBF2Q12772 1141 aa13.16□□□□□ -0.3
RAF1-209ENST00000475353 TNFAIP1Q13829 316 aa13.16□□□□□ -0.3
RAF1-209ENST00000475353 CDAN1Q8IWY9 1227 aa13.16□□□□□ -0.3
RAF1-209ENST00000475353 LPIN2Q92539 896 aa13.16□□□□□ -0.3
RAF1-209ENST00000475353 ARHGAP45Q92619 1136 aa13.16□□□□□ -0.3
RAF1-209ENST00000475353 TEKT1Q969V4 418 aa13.16□□□□□ -0.3
RAF1-209ENST00000475353 WNK4Q96J92 1243 aa13.16□□□□□ -0.3
RAF1-209ENST00000475353 PA2G4Q9UQ80 394 aaKnown RBP13.16□□□□□ -0.3
RAF1-209ENST00000475353 CIAO1O76071 339 aa13.15□□□□□ -0.3
RAF1-209ENST00000475353 IREB2P48200 963 aaKnown RBP13.15□□□□□ -0.3
RAF1-209ENST00000475353 CACNB3P54284 484 aa13.15□□□□□ -0.3
RAF1-209ENST00000475353 ATP2B3Q16720 1220 aa13.15□□□□□ -0.3
RAF1-209ENST00000475353 INTS3Q68E01 1043 aaKnown RBP13.15□□□□□ -0.3
RAF1-209ENST00000475353 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
RAF1-209ENST00000475353 TEPSINQ96N21 525 aa13.15□□□□□ -0.3
RAF1-209ENST00000475353 TMEM39BQ9GZU3 492 aa13.15□□□□□ -0.3
RAF1-209ENST00000475353 CEP126Q9P2H0 1117 aa13.15□□□□□ -0.3
RAF1-209ENST00000475353 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
RAF1-209ENST00000475353 HDAC5Q9UQL6 1122 aa13.15□□□□□ -0.3
RAF1-209ENST00000475353 TNNQ9UQP3 1299 aa13.15□□□□□ -0.3
RAF1-209ENST00000475353 UNCXA6NJT0 531 aa13.14□□□□□ -0.31
RAF1-209ENST00000475353 BCAR3O75815 825 aa13.14□□□□□ -0.31
RAF1-209ENST00000475353 ZBTB48P10074 688 aaPredicted RBP13.14□□□□□ -0.31
RAF1-209ENST00000475353 TNNI2P48788 182 aa13.14□□□□□ -0.31
RAF1-209ENST00000475353 CTU1Q7Z7A3 348 aaKnown RBP13.14□□□□□ -0.31
RAF1-209ENST00000475353 ANKRD13AQ8IZ07 590 aa13.14□□□□□ -0.31
RAF1-209ENST00000475353 MIER1Q8N108 512 aa13.14□□□□□ -0.31
RAF1-209ENST00000475353 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
RAF1-209ENST00000475353 MRIQ9BWK5 157 aa13.14□□□□□ -0.31
RAF1-209ENST00000475353 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
RAF1-209ENST00000475353 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
RAF1-209ENST00000475353 OTOFQ9HC10 1997 aa13.14□□□□□ -0.31
RAF1-209ENST00000475353 MANSC4A6NHS7 340 aaPredicted RBP13.13□□□□□ -0.31
RAF1-209ENST00000475353 GPR25O00155 361 aa13.13□□□□□ -0.31
RAF1-209ENST00000475353 GJA5P36382 358 aa13.13□□□□□ -0.31
RAF1-209ENST00000475353 IL15P40933 162 aaPredicted RBP13.13□□□□□ -0.31
RAF1-209ENST00000475353 APOBEC3HQ6NTF7 200 aaKnown RBP13.13□□□□□ -0.31
RAF1-209ENST00000475353 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
RAF1-209ENST00000475353 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
RAF1-209ENST00000475353 FRAT1Q92837 279 aaPredicted RBP13.13□□□□□ -0.31
RAF1-209ENST00000475353 ZDHHC15Q96MV8 337 aa13.13□□□□□ -0.31
RAF1-209ENST00000475353 ELP3Q9H9T3 547 aa13.13□□□□□ -0.31
RAF1-209ENST00000475353 SUGT1Q9Y2Z0 365 aa13.13□□□□□ -0.31
RAF1-209ENST00000475353 MAST3O60307 1309 aa13.13□□□□□ -0.31
RAF1-209ENST00000475353 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
RAF1-209ENST00000475353 GNAI3P08754 354 aa13.12□□□□□ -0.31
RAF1-209ENST00000475353 TRIM27P14373 513 aa13.12□□□□□ -0.31
RAF1-209ENST00000475353 ADORA1P30542 326 aa13.12□□□□□ -0.31
RAF1-209ENST00000475353 INHBEP58166 350 aa13.12□□□□□ -0.31
RAF1-209ENST00000475353 HHIPL2Q6UWX4 724 aa13.12□□□□□ -0.31
RAF1-209ENST00000475353 CFHR5Q9BXR6 569 aa13.12□□□□□ -0.31
RAF1-209ENST00000475353 LAMB1P07942 1786 aa13.12□□□□□ -0.31
RAF1-209ENST00000475353 IGF2BP3O00425 579 aaKnown RBP eCLIP13.11□□□□□ -0.31
RAF1-209ENST00000475353 SRGAP3O43295 1099 aa13.11□□□□□ -0.31
RAF1-209ENST00000475353 ALDH1A1P00352 501 aa13.11□□□□□ -0.31
RAF1-209ENST00000475353 PHKA1P46020 1223 aa13.11□□□□□ -0.31
RAF1-209ENST00000475353 RGS19P49795 217 aa13.11□□□□□ -0.31
RAF1-209ENST00000475353 NOM1Q5C9Z4 860 aaKnown RBP13.11□□□□□ -0.31
RAF1-209ENST00000475353 ATF7IPQ6VMQ6 1270 aa13.11□□□□□ -0.31
RAF1-209ENST00000475353 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.11□□□□□ -0.31
RAF1-209ENST00000475353 CLUAP1Q96AJ1 413 aa13.11□□□□□ -0.31
RAF1-209ENST00000475353 GNL3LQ9NVN8 582 aaKnown RBP13.11□□□□□ -0.31
RAF1-209ENST00000475353 TMOD2Q9NZR1 351 aa13.11□□□□□ -0.31
RAF1-209ENST00000475353 FKTNO75072 461 aa13.1□□□□□ -0.31
RAF1-209ENST00000475353 PRDX5P30044 214 aa13.1□□□□□ -0.31
RAF1-209ENST00000475353 TIMM10P62072 90 aa13.1□□□□□ -0.31
RAF1-209ENST00000475353 MAP3K9P80192 1104 aa13.1□□□□□ -0.31
RAF1-209ENST00000475353 HNRNPUQ00839 825 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAF1-209ENST00000475353 DIXDC1Q155Q3 683 aa13.1□□□□□ -0.31
RAF1-209ENST00000475353 DIEXFQ68CQ4 756 aaKnown RBP13.1□□□□□ -0.31
RAF1-209ENST00000475353 FAM83AQ86UY5 434 aa13.1□□□□□ -0.31
RAF1-209ENST00000475353 CNKSR2Q8WXI2 1034 aa13.1□□□□□ -0.31
RAF1-209ENST00000475353 OPTNQ96CV9 577 aa13.1□□□□□ -0.31
RAF1-209ENST00000475353 DENND2AQ9ULE3 1009 aa13.1□□□□□ -0.31
RAF1-209ENST00000475353 LDHBP07195 334 aaKnown RBP13.09□□□□□ -0.31
RAF1-209ENST00000475353 MLLT1Q03111 559 aaPredicted RBP13.09□□□□□ -0.31
RAF1-209ENST00000475353 TFCP2Q12800 502 aa13.09□□□□□ -0.31
RAF1-209ENST00000475353 MTX1Q13505 466 aa13.09□□□□□ -0.31
RAF1-209ENST00000475353 VGLL4Q14135 290 aa13.09□□□□□ -0.31
RAF1-209ENST00000475353 FKBP1CQ5VVH2 108 aa13.09□□□□□ -0.31
RAF1-209ENST00000475353 CCDC102BQ68D86 513 aa13.09□□□□□ -0.31
RAF1-209ENST00000475353 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.09□□□□□ -0.31
RAF1-209ENST00000475353 PTPN18Q99952 460 aa13.09□□□□□ -0.31
RAF1-209ENST00000475353 DAGLAQ9Y4D2 1042 aa13.09□□□□□ -0.31
RAF1-209ENST00000475353 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.09□□□□□ -0.31
RAF1-209ENST00000475353 AK9Q5TCS8 1911 aa13.09□□□□□ -0.31
RAF1-209ENST00000475353 A0A1B0GUL7 405 aa13.08□□□□□ -0.32
RAF1-209ENST00000475353 TESPA1A2RU30 521 aaPredicted RBP13.08□□□□□ -0.32
RAF1-209ENST00000475353 SEMA3EO15041 775 aa13.08□□□□□ -0.32
RAF1-209ENST00000475353 GNAI2P04899 355 aa13.08□□□□□ -0.32
RAF1-209ENST00000475353 SOX10P56693 466 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms