RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 FAM9BQ8IZU0 186 aa19.7■□□□□ 0.74
SRRT-209ENST00000474896 CD99L2Q8TCZ2 262 aa19.7■□□□□ 0.74
SRRT-209ENST00000474896 OPTNQ96CV9 577 aa19.7■□□□□ 0.74
SRRT-209ENST00000474896 TEPSINQ96N21 525 aa19.7■□□□□ 0.74
SRRT-209ENST00000474896 MROH5Q6ZUA9 1318 aa19.7■□□□□ 0.74
SRRT-209ENST00000474896 GRIK5Q16478 980 aa19.69■□□□□ 0.74
SRRT-209ENST00000474896 CDAN1Q8IWY9 1227 aa19.69■□□□□ 0.74
SRRT-209ENST00000474896 TMEM39BQ9GZU3 492 aa19.69■□□□□ 0.74
SRRT-209ENST00000474896 IQSEC3Q9UPP2 1182 aaPredicted RBP19.69■□□□□ 0.74
SRRT-209ENST00000474896 PTPN22Q9Y2R2 807 aa19.69■□□□□ 0.74
SRRT-209ENST00000474896 MAP3K9P80192 1104 aa19.68■□□□□ 0.74
SRRT-209ENST00000474896 SP3Q02447 781 aa19.68■□□□□ 0.74
SRRT-209ENST00000474896 LRRC24Q50LG9 513 aa19.68■□□□□ 0.74
SRRT-209ENST00000474896 INTS3Q68E01 1043 aaKnown RBP19.68■□□□□ 0.74
SRRT-209ENST00000474896 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.68■□□□□ 0.74
SRRT-209ENST00000474896 MS4A4AQ96JQ5 239 aa19.68■□□□□ 0.74
SRRT-209ENST00000474896 BICC1Q9H694 974 aaKnown RBP19.68■□□□□ 0.74
SRRT-209ENST00000474896 UTYO14607 1347 aa19.68■□□□□ 0.74
SRRT-209ENST00000474896 CCER2I3L3R5 266 aa19.67■□□□□ 0.74
SRRT-209ENST00000474896 FRAT2O75474 233 aaPredicted RBP19.67■□□□□ 0.74
SRRT-209ENST00000474896 TNNI2P48788 182 aa19.67■□□□□ 0.74
SRRT-209ENST00000474896 CHAF1AQ13111 956 aaPredicted RBP19.67■□□□□ 0.74
SRRT-209ENST00000474896 CNKSR2Q8WXI2 1034 aa19.67■□□□□ 0.74
SRRT-209ENST00000474896 EFCC1Q9HA90 598 aa19.67■□□□□ 0.74
SRRT-209ENST00000474896 POTEFA5A3E0 1075 aa19.66■□□□□ 0.74
SRRT-209ENST00000474896 CAVIN4Q5BKX8 364 aa19.66■□□□□ 0.74
SRRT-209ENST00000474896 METTL24Q5JXM2 366 aa19.66■□□□□ 0.74
SRRT-209ENST00000474896 LAMB1P07942 1786 aa19.65■□□□□ 0.74
SRRT-209ENST00000474896 HDLBPQ00341 1268 aaKnown RBP19.65■□□□□ 0.74
SRRT-209ENST00000474896 VGLL4Q14135 290 aa19.65■□□□□ 0.74
SRRT-209ENST00000474896 RABL6Q3YEC7 729 aaPredicted RBP19.65■□□□□ 0.74
SRRT-209ENST00000474896 ANKRD44Q8N8A2 993 aa19.65■□□□□ 0.74
SRRT-209ENST00000474896 TBC1D22AQ8WUA7 517 aa19.65■□□□□ 0.74
SRRT-209ENST00000474896 CCL15-CCL14A0A0B4J2E2 113 aa19.64■□□□□ 0.73
SRRT-209ENST00000474896 PDE8BO95263 885 aa19.64■□□□□ 0.73
SRRT-209ENST00000474896 BCAMP50895 628 aa19.64■□□□□ 0.73
SRRT-209ENST00000474896 GTF2A2P52657 109 aa19.64■□□□□ 0.73
SRRT-209ENST00000474896 CACNB3P54284 484 aa19.64■□□□□ 0.73
SRRT-209ENST00000474896 CAP1Q01518 475 aa19.64■□□□□ 0.73
SRRT-209ENST00000474896 CCL15Q16663 113 aa19.64■□□□□ 0.73
SRRT-209ENST00000474896 MRPL50Q8N5N7 158 aaKnown RBP19.64■□□□□ 0.73
SRRT-209ENST00000474896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.64■□□□□ 0.73
SRRT-209ENST00000474896 BRI3BPQ8WY22 251 aa19.64■□□□□ 0.73
SRRT-209ENST00000474896 CSADQ9Y600 493 aa19.64■□□□□ 0.73
SRRT-209ENST00000474896 VGLL2Q8N8G2 317 aa19.63■□□□□ 0.73
SRRT-209ENST00000474896 KLHDC4Q8TBB5 520 aa19.63■□□□□ 0.73
SRRT-209ENST00000474896 TEKT1Q969V4 418 aa19.63■□□□□ 0.73
SRRT-209ENST00000474896 MRIQ9BWK5 157 aa19.63■□□□□ 0.73
SRRT-209ENST00000474896 ZFYVE28Q9HCC9 887 aa19.63■□□□□ 0.73
SRRT-209ENST00000474896 OTOFQ9HC10 1997 aa19.63■□□□□ 0.73
SRRT-209ENST00000474896 TAF1CQ15572 869 aaPredicted RBP19.62■□□□□ 0.73
SRRT-209ENST00000474896 OTUD5Q96G74 571 aa19.62■□□□□ 0.73
SRRT-209ENST00000474896 FAM43AQ8N2R8 423 aa19.61■□□□□ 0.73
SRRT-209ENST00000474896 ARMC5Q96C12 935 aa19.61■□□□□ 0.73
SRRT-209ENST00000474896 ZDHHC15Q96MV8 337 aa19.61■□□□□ 0.73
SRRT-209ENST00000474896 KIAA0100Q14667 2235 aaKnown RBP19.61■□□□□ 0.73
SRRT-209ENST00000474896 EN2P19622 333 aaPredicted RBP19.6■□□□□ 0.73
SRRT-209ENST00000474896 ARHGEF6Q15052 776 aa19.6■□□□□ 0.73
SRRT-209ENST00000474896 APOBEC3HQ6NTF7 200 aaKnown RBP19.6■□□□□ 0.73
SRRT-209ENST00000474896 USP44Q9H0E7 712 aa19.6■□□□□ 0.73
SRRT-209ENST00000474896 TMOD2Q9NZR1 351 aa19.6■□□□□ 0.73
SRRT-209ENST00000474896 ARAP2Q8WZ64 1704 aa19.59■□□□□ 0.73
SRRT-209ENST00000474896 PTPRCP08575 1304 aa19.59■□□□□ 0.73
SRRT-209ENST00000474896 ZNF521Q96K83 1311 aa19.59■□□□□ 0.73
SRRT-209ENST00000474896 IFIT1P09914 478 aaKnown RBP19.59■□□□□ 0.73
SRRT-209ENST00000474896 ZKSCAN4Q969J2 545 aaPredicted RBP19.59■□□□□ 0.73
SRRT-209ENST00000474896 SPDYE5A6NIY4 337 aa19.58■□□□□ 0.72
SRRT-209ENST00000474896 CETPP11597 493 aa19.58■□□□□ 0.72
SRRT-209ENST00000474896 FGFR2P21802 821 aa19.58■□□□□ 0.72
SRRT-209ENST00000474896 PUM3Q15397 648 aaKnown RBP19.58■□□□□ 0.72
SRRT-209ENST00000474896 FAM83AQ86UY5 434 aa19.58■□□□□ 0.72
SRRT-209ENST00000474896 ERO1BQ86YB8 467 aa19.58■□□□□ 0.72
SRRT-209ENST00000474896 WRNIP1Q96S55 665 aa19.58■□□□□ 0.72
SRRT-209ENST00000474896 TMEM106CQ9BVX2 250 aa19.58■□□□□ 0.72
SRRT-209ENST00000474896 SUGT1Q9Y2Z0 365 aa19.58■□□□□ 0.72
SRRT-209ENST00000474896 SNCAIPQ9Y6H5 919 aa19.58■□□□□ 0.72
SRRT-209ENST00000474896 WDHD1O75717 1129 aaPredicted RBP19.57■□□□□ 0.72
SRRT-209ENST00000474896 FKBP1CQ5VVH2 108 aa19.57■□□□□ 0.72
SRRT-209ENST00000474896 HHIPL2Q6UWX4 724 aa19.57■□□□□ 0.72
SRRT-209ENST00000474896 NBPF11Q86T75 865 aa19.57■□□□□ 0.72
SRRT-209ENST00000474896 SSH1Q8WYL5 1049 aa19.57■□□□□ 0.72
SRRT-209ENST00000474896 GCC1Q96CN9 775 aa19.57■□□□□ 0.72
SRRT-209ENST00000474896 HOOK2Q96ED9 719 aa19.57■□□□□ 0.72
SRRT-209ENST00000474896 MAST3O60307 1309 aa19.56■□□□□ 0.72
SRRT-209ENST00000474896 IRF6O14896 467 aa19.56■□□□□ 0.72
SRRT-209ENST00000474896 MIGA2Q7L4E1 593 aa19.56■□□□□ 0.72
SRRT-209ENST00000474896 ZNF333Q96JL9 665 aa19.56■□□□□ 0.72
SRRT-209ENST00000474896 PTCH2Q9Y6C5 1203 aa19.56■□□□□ 0.72
SRRT-209ENST00000474896 KIF16BQ96L93 1317 aa19.55■□□□□ 0.72
SRRT-209ENST00000474896 BTBD19C9JJ37 291 aa19.55■□□□□ 0.72
SRRT-209ENST00000474896 EYA2O00167 538 aa19.55■□□□□ 0.72
SRRT-209ENST00000474896 TLR2O60603 784 aa19.55■□□□□ 0.72
SRRT-209ENST00000474896 RFX5P48382 616 aaPredicted RBP19.55■□□□□ 0.72
SRRT-209ENST00000474896 SNAPC2Q13487 334 aa19.55■□□□□ 0.72
SRRT-209ENST00000474896 SLC9C1Q4G0N8 1177 aa19.55■□□□□ 0.72
SRRT-209ENST00000474896 DCAF15Q66K64 600 aa19.55■□□□□ 0.72
SRRT-209ENST00000474896 HTTP42858 3142 aa19.54■□□□□ 0.72
SRRT-209ENST00000474896 SLC5A1P13866 664 aa19.54■□□□□ 0.72
SRRT-209ENST00000474896 WDR66Q8TBY9 1149 aa19.54■□□□□ 0.72
SRRT-209ENST00000474896 LPIN2Q92539 896 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms