RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 IREB2P48200 963 aaKnown RBP25.39■■□□□ 1.66
PDLIM4-206ENST00000474421 SPRYD7Q5W111 196 aa25.39■■□□□ 1.66
PDLIM4-206ENST00000474421 MRIQ9BWK5 157 aa25.39■■□□□ 1.66
PDLIM4-206ENST00000474421 TDRD3Q9H7E2 651 aaKnown RBP25.39■■□□□ 1.66
PDLIM4-206ENST00000474421 SSC5DA1L4H1 1573 aa25.39■■□□□ 1.65
PDLIM4-206ENST00000474421 AOX1Q06278 1338 aa25.38■■□□□ 1.65
PDLIM4-206ENST00000474421 MYH13Q9UKX3 1938 aa25.38■■□□□ 1.65
PDLIM4-206ENST00000474421 IPO8O15397 1037 aaKnown RBP25.38■■□□□ 1.65
PDLIM4-206ENST00000474421 TNNI2P48788 182 aa25.38■■□□□ 1.65
PDLIM4-206ENST00000474421 MKRN3Q13064 507 aaKnown RBP25.38■■□□□ 1.65
PDLIM4-206ENST00000474421 NBPF12Q5TAG4 269 aaPredicted RBP25.38■■□□□ 1.65
PDLIM4-206ENST00000474421 ATG9AQ7Z3C6 839 aa25.38■■□□□ 1.65
PDLIM4-206ENST00000474421 TEKT1Q969V4 418 aa25.38■■□□□ 1.65
PDLIM4-206ENST00000474421 CEP126Q9P2H0 1117 aa25.38■■□□□ 1.65
PDLIM4-206ENST00000474421 LRRFIP2Q9Y608 721 aaKnown RBP25.38■■□□□ 1.65
PDLIM4-206ENST00000474421 ZBTB48P10074 688 aaPredicted RBP25.37■■□□□ 1.65
PDLIM4-206ENST00000474421 INTS3Q68E01 1043 aaKnown RBP25.37■■□□□ 1.65
PDLIM4-206ENST00000474421 GNAI3P08754 354 aa25.36■■□□□ 1.65
PDLIM4-206ENST00000474421 IL15P40933 162 aaPredicted RBP25.36■■□□□ 1.65
PDLIM4-206ENST00000474421 INHBEP58166 350 aa25.36■■□□□ 1.65
PDLIM4-206ENST00000474421 WDR66Q8TBY9 1149 aa25.36■■□□□ 1.65
PDLIM4-206ENST00000474421 SIL1Q9H173 461 aa25.36■■□□□ 1.65
PDLIM4-206ENST00000474421 FZD1Q9UP38 647 aa25.36■■□□□ 1.65
PDLIM4-206ENST00000474421 MANSC4A6NHS7 340 aaPredicted RBP25.35■■□□□ 1.65
PDLIM4-206ENST00000474421 GRIK5Q16478 980 aa25.35■■□□□ 1.65
PDLIM4-206ENST00000474421 MEIS3Q99687 375 aa25.35■■□□□ 1.65
PDLIM4-206ENST00000474421 GNL3LQ9NVN8 582 aaKnown RBP25.35■■□□□ 1.65
PDLIM4-206ENST00000474421 ALDH1A1P00352 501 aa25.34■■□□□ 1.65
PDLIM4-206ENST00000474421 ATP2B3Q16720 1220 aa25.34■■□□□ 1.65
PDLIM4-206ENST00000474421 NOM1Q5C9Z4 860 aaKnown RBP25.34■■□□□ 1.65
PDLIM4-206ENST00000474421 CTU1Q7Z7A3 348 aaKnown RBP25.34■■□□□ 1.65
PDLIM4-206ENST00000474421 ANKRD13AQ8IZ07 590 aa25.34■■□□□ 1.65
PDLIM4-206ENST00000474421 ZDHHC15Q96MV8 337 aa25.34■■□□□ 1.65
PDLIM4-206ENST00000474421 TMOD2Q9NZR1 351 aa25.34■■□□□ 1.65
PDLIM4-206ENST00000474421 TCP10L2B9ZVM9 353 aa25.33■■□□□ 1.65
PDLIM4-206ENST00000474421 USP2O75604 605 aaPredicted RBP25.33■■□□□ 1.65
PDLIM4-206ENST00000474421 WNK4Q96J92 1243 aa25.33■■□□□ 1.65
PDLIM4-206ENST00000474421 CFHR5Q9BXR6 569 aa25.33■■□□□ 1.65
PDLIM4-206ENST00000474421 COPRSQ9NQ92 184 aa25.33■■□□□ 1.65
PDLIM4-206ENST00000474421 TBC1D8O95759 1140 aa25.32■■□□□ 1.64
PDLIM4-206ENST00000474421 HHIPL2Q6UWX4 724 aa25.32■■□□□ 1.64
PDLIM4-206ENST00000474421 CLMNQ96JQ2 1002 aa25.32■■□□□ 1.64
PDLIM4-206ENST00000474421 FKBP1CQ5VVH2 108 aa25.31■■□□□ 1.64
PDLIM4-206ENST00000474421 TEPSINQ96N21 525 aa25.31■■□□□ 1.64
PDLIM4-206ENST00000474421 LAMB1P07942 1786 aa25.31■■□□□ 1.64
PDLIM4-206ENST00000474421 TMEM39BQ9GZU3 492 aa25.3■■□□□ 1.64
PDLIM4-206ENST00000474421 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.3■■□□□ 1.64
PDLIM4-206ENST00000474421 GPR25O00155 361 aa25.29■■□□□ 1.64
PDLIM4-206ENST00000474421 SEMA3EO15041 775 aa25.29■■□□□ 1.64
PDLIM4-206ENST00000474421 PKN2Q16513 984 aaKnown RBP25.29■■□□□ 1.64
PDLIM4-206ENST00000474421 ATF7IPQ6VMQ6 1270 aa25.29■■□□□ 1.64
PDLIM4-206ENST00000474421 FAM83AQ86UY5 434 aa25.29■■□□□ 1.64
PDLIM4-206ENST00000474421 ZNF296Q8WUU4 475 aaPredicted RBP25.29■■□□□ 1.64
PDLIM4-206ENST00000474421 HOOK2Q96ED9 719 aa25.29■■□□□ 1.64
PDLIM4-206ENST00000474421 PA2G4Q9UQ80 394 aaKnown RBP25.29■■□□□ 1.64
PDLIM4-206ENST00000474421 SRGAP3O43295 1099 aa25.28■■□□□ 1.64
PDLIM4-206ENST00000474421 TRIM27P14373 513 aa25.28■■□□□ 1.64
PDLIM4-206ENST00000474421 APOBEC3HQ6NTF7 200 aaKnown RBP25.28■■□□□ 1.64
PDLIM4-206ENST00000474421 IFNL1Q8IU54 200 aa25.28■■□□□ 1.64
PDLIM4-206ENST00000474421 DENND2AQ9ULE3 1009 aa25.28■■□□□ 1.64
PDLIM4-206ENST00000474421 OTOFQ9HC10 1997 aa25.27■■□□□ 1.64
PDLIM4-206ENST00000474421 ZBTB22O15209 634 aa25.27■■□□□ 1.64
PDLIM4-206ENST00000474421 RGS19P49795 217 aa25.27■■□□□ 1.64
PDLIM4-206ENST00000474421 MTX1Q13505 466 aa25.27■■□□□ 1.64
PDLIM4-206ENST00000474421 OTUD7BQ6GQQ9 843 aa25.27■■□□□ 1.64
PDLIM4-206ENST00000474421 FRAT1Q92837 279 aaPredicted RBP25.27■■□□□ 1.64
PDLIM4-206ENST00000474421 FKTNO75072 461 aa25.25■■□□□ 1.63
PDLIM4-206ENST00000474421 BCAR3O75815 825 aa25.25■■□□□ 1.63
PDLIM4-206ENST00000474421 GNAI2P04899 355 aa25.25■■□□□ 1.63
PDLIM4-206ENST00000474421 CACNB3P54284 484 aa25.25■■□□□ 1.63
PDLIM4-206ENST00000474421 MAP3K9P80192 1104 aa25.25■■□□□ 1.63
PDLIM4-206ENST00000474421 HNRNPUQ00839 825 aaKnown RBP eCLIP25.25■■□□□ 1.63
PDLIM4-206ENST00000474421 DIEXFQ68CQ4 756 aaKnown RBP25.25■■□□□ 1.63
PDLIM4-206ENST00000474421 ZGPATQ8N5A5 531 aaKnown RBP25.25■■□□□ 1.63
PDLIM4-206ENST00000474421 AKAP2Q9Y2D5 859 aa25.25■■□□□ 1.63
PDLIM4-206ENST00000474421 CSADQ9Y600 493 aa25.25■■□□□ 1.63
PDLIM4-206ENST00000474421 SALL1Q9NSC2 1324 aa25.25■■□□□ 1.63
PDLIM4-206ENST00000474421 LDHBP07195 334 aaKnown RBP25.24■■□□□ 1.63
PDLIM4-206ENST00000474421 CDAN1Q8IWY9 1227 aa25.24■■□□□ 1.63
PDLIM4-206ENST00000474421 MIER1Q8N108 512 aa25.24■■□□□ 1.63
PDLIM4-206ENST00000474421 OPTNQ96CV9 577 aa25.24■■□□□ 1.63
PDLIM4-206ENST00000474421 ELP3Q9H9T3 547 aa25.24■■□□□ 1.63
PDLIM4-206ENST00000474421 RPAP1Q9BWH6 1393 aaPredicted RBP25.23■■□□□ 1.63
PDLIM4-206ENST00000474421 PHKA1P46020 1223 aa25.23■■□□□ 1.63
PDLIM4-206ENST00000474421 MLLT1Q03111 559 aaPredicted RBP25.23■■□□□ 1.63
PDLIM4-206ENST00000474421 ZKSCAN2Q63HK3 967 aa25.23■■□□□ 1.63
PDLIM4-206ENST00000474421 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.23■■□□□ 1.63
PDLIM4-206ENST00000474421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.23■■□□□ 1.63
PDLIM4-206ENST00000474421 GJA5P36382 358 aa25.22■■□□□ 1.63
PDLIM4-206ENST00000474421 VGLL4Q14135 290 aa25.22■■□□□ 1.63
PDLIM4-206ENST00000474421 DCAF15Q66K64 600 aa25.22■■□□□ 1.63
PDLIM4-206ENST00000474421 CCDC102BQ68D86 513 aa25.22■■□□□ 1.63
PDLIM4-206ENST00000474421 DAGLAQ9Y4D2 1042 aa25.22■■□□□ 1.63
PDLIM4-206ENST00000474421 PDS5AQ29RF7 1337 aaKnown RBP25.21■■□□□ 1.63
PDLIM4-206ENST00000474421 TESPA1A2RU30 521 aaPredicted RBP25.21■■□□□ 1.63
PDLIM4-206ENST00000474421 IGF2BP3O00425 579 aaKnown RBP eCLIP25.21■■□□□ 1.63
PDLIM4-206ENST00000474421 PRDX5P30044 214 aa25.21■■□□□ 1.63
PDLIM4-206ENST00000474421 CLUAP1Q96AJ1 413 aa25.21■■□□□ 1.63
PDLIM4-206ENST00000474421 ADORA1P30542 326 aa25.2■■□□□ 1.62
PDLIM4-206ENST00000474421 TIMM10P62072 90 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms