RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 KIAA0232Q92628 1395 aa9.91□□□□□ -0.82
VPS50-211ENST00000474412 PEAK1Q9H792 1746 aa9.91□□□□□ -0.82
VPS50-211ENST00000474412 ARHGEF15O94989 841 aa9.91□□□□□ -0.82
VPS50-211ENST00000474412 FKBP5Q13451 457 aaPredicted RBP9.91□□□□□ -0.82
VPS50-211ENST00000474412 BRD7Q9NPI1 651 aa9.91□□□□□ -0.82
VPS50-211ENST00000474412 STRN4Q9NRL3 753 aa9.91□□□□□ -0.82
VPS50-211ENST00000474412 USP19O94966 1318 aa9.9□□□□□ -0.82
VPS50-211ENST00000474412 TYRO3Q06418 890 aa9.9□□□□□ -0.82
VPS50-211ENST00000474412 UNC5CLQ8IV45 518 aa9.9□□□□□ -0.82
VPS50-211ENST00000474412 NEDD1Q8NHV4 660 aa9.9□□□□□ -0.82
VPS50-211ENST00000474412 ARID3AQ99856 593 aa9.9□□□□□ -0.82
VPS50-211ENST00000474412 GGA1Q9UJY5 639 aa9.9□□□□□ -0.82
VPS50-211ENST00000474412 HCN2Q9UL51 889 aa9.9□□□□□ -0.82
VPS50-211ENST00000474412 NUP188Q5SRE5 1749 aa9.9□□□□□ -0.83
VPS50-211ENST00000474412 SBNO2Q9Y2G9 1366 aa9.89□□□□□ -0.83
VPS50-211ENST00000474412 FAM83GA6ND36 823 aa9.89□□□□□ -0.83
VPS50-211ENST00000474412 OIP5O43482 229 aa9.89□□□□□ -0.83
VPS50-211ENST00000474412 ARAFP10398 606 aa9.89□□□□□ -0.83
VPS50-211ENST00000474412 MARSP56192 900 aaKnown RBP9.89□□□□□ -0.83
VPS50-211ENST00000474412 DGKZQ13574 1117 aa9.89□□□□□ -0.83
VPS50-211ENST00000474412 CHRNA2Q15822 529 aa9.89□□□□□ -0.83
VPS50-211ENST00000474412 OCLNQ16625 522 aa9.89□□□□□ -0.83
VPS50-211ENST00000474412 BTLAQ7Z6A9 289 aa9.89□□□□□ -0.83
VPS50-211ENST00000474412 KLK14Q9P0G3 267 aa9.89□□□□□ -0.83
VPS50-211ENST00000474412 SHANK3Q9BYB0 1731 aa9.89□□□□□ -0.83
VPS50-211ENST00000474412 ANKRD26Q9UPS8 1709 aa9.89□□□□□ -0.83
VPS50-211ENST00000474412 COL5A2P05997 1499 aaPredicted RBP9.89□□□□□ -0.83
VPS50-211ENST00000474412 FAM208AQ9UK61 1670 aaKnown RBP9.88□□□□□ -0.83
VPS50-211ENST00000474412 NEURL1BA8MQ27 555 aa9.88□□□□□ -0.83
VPS50-211ENST00000474412 SFSWAPQ12872 951 aaKnown RBP9.88□□□□□ -0.83
VPS50-211ENST00000474412 SLCO4C1Q6ZQN7 724 aa9.88□□□□□ -0.83
VPS50-211ENST00000474412 CLP1Q92989 425 aaKnown RBP9.88□□□□□ -0.83
VPS50-211ENST00000474412 LRRC4BQ9NT99 713 aa9.88□□□□□ -0.83
VPS50-211ENST00000474412 BTG4Q9NY30 223 aa9.88□□□□□ -0.83
VPS50-211ENST00000474412 CXXC1Q9P0U4 656 aaPredicted RBP9.88□□□□□ -0.83
VPS50-211ENST00000474412 CPSF1Q10570 1443 aaKnown RBP9.88□□□□□ -0.83
VPS50-211ENST00000474412 TGFBR3LH3BV60 316 aa9.87□□□□□ -0.83
VPS50-211ENST00000474412 ADH6P28332 368 aa9.87□□□□□ -0.83
VPS50-211ENST00000474412 VPS72Q15906 364 aa9.87□□□□□ -0.83
VPS50-211ENST00000474412 ZNF468Q5VIY5 522 aaPredicted RBP9.87□□□□□ -0.83
VPS50-211ENST00000474412 GALNT6Q8NCL4 622 aa9.87□□□□□ -0.83
VPS50-211ENST00000474412 MKNK1Q9BUB5 465 aa9.87□□□□□ -0.83
VPS50-211ENST00000474412 DNMT3AQ9Y6K1 912 aaPredicted RBP9.87□□□□□ -0.83
VPS50-211ENST00000474412 EVC2Q86UK5 1308 aa9.86□□□□□ -0.83
VPS50-211ENST00000474412 ZC3H6P61129 1189 aaKnown RBP9.86□□□□□ -0.83
VPS50-211ENST00000474412 IER5Q5VY09 327 aa9.86□□□□□ -0.83
VPS50-211ENST00000474412 EDARADDQ8WWZ3 215 aa9.86□□□□□ -0.83
VPS50-211ENST00000474412 MYO19Q96H55 970 aa9.86□□□□□ -0.83
VPS50-211ENST00000474412 CARD11Q9BXL7 1154 aa9.86□□□□□ -0.83
VPS50-211ENST00000474412 AVENQ9NQS1 362 aaPredicted RBP9.86□□□□□ -0.83
VPS50-211ENST00000474412 PRDM11Q9NQV5 511 aa9.86□□□□□ -0.83
VPS50-211ENST00000474412 KCNH4Q9UQ05 1017 aa9.86□□□□□ -0.83
VPS50-211ENST00000474412 CCDC9Q9Y3X0 531 aaKnown RBP9.86□□□□□ -0.83
VPS50-211ENST00000474412 AMPD1P23109 780 aa9.85□□□□□ -0.83
VPS50-211ENST00000474412 PCBP4P57723 403 aaKnown RBP9.85□□□□□ -0.83
VPS50-211ENST00000474412 BCS1LQ9Y276 419 aa9.85□□□□□ -0.83
VPS50-211ENST00000474412 RGPD3A6NKT7 1758 aaPredicted RBP9.85□□□□□ -0.83
VPS50-211ENST00000474412 RGPD4Q7Z3J3 1758 aa9.85□□□□□ -0.83
VPS50-211ENST00000474412 CPDO75976 1380 aa9.85□□□□□ -0.83
VPS50-211ENST00000474412 ABCC6O95255 1503 aa9.84□□□□□ -0.83
VPS50-211ENST00000474412 RNF225M0QZC1 329 aaPredicted RBP9.84□□□□□ -0.83
VPS50-211ENST00000474412 ATP2B4P23634 1241 aa9.84□□□□□ -0.83
VPS50-211ENST00000474412 SPEM2Q0P670 501 aa9.84□□□□□ -0.83
VPS50-211ENST00000474412 GRIN2CQ14957 1233 aa9.84□□□□□ -0.83
VPS50-211ENST00000474412 C11orf91Q3C1V1 193 aa9.84□□□□□ -0.83
VPS50-211ENST00000474412 C1orf229Q6ZS94 237 aaPredicted RBP9.84□□□□□ -0.83
VPS50-211ENST00000474412 ABTB2Q8N961 1025 aa9.84□□□□□ -0.83
VPS50-211ENST00000474412 A0A1W2PP64 1363 aa9.84□□□□□ -0.83
VPS50-211ENST00000474412 SPATA31A5Q5VU36 1347 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 SPATA31A7Q8IWB4 1347 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 OVOS2A0A0J9YW53 1432 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 OVOS2Q6IE36 1432 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 DOT1LQ8TEK3 1739 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 SHISA8B8ZZ34 492 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 PTCD1O75127 700 aaKnown RBP9.83□□□□□ -0.84
VPS50-211ENST00000474412 EPXP11678 715 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 EPB42P16452 691 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 KCNQ4P56696 695 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 PODNQ7Z5L7 613 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 SYT9Q86SS6 491 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 SCARF2Q96GP6 870 aaPredicted RBP9.83□□□□□ -0.84
VPS50-211ENST00000474412 SLC30A3Q99726 388 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 KTN1Q86UP2 1357 aaKnown RBP9.83□□□□□ -0.84
VPS50-211ENST00000474412 USP47Q96K76 1375 aa9.83□□□□□ -0.84
VPS50-211ENST00000474412 TTC21BQ7Z4L5 1316 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 BLMP54132 1417 aaPredicted RBP9.82□□□□□ -0.84
VPS50-211ENST00000474412 MAP2P11137 1827 aaKnown RBP9.82□□□□□ -0.84
VPS50-211ENST00000474412 ZBTB7CA1YPR0 619 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 IDH3AP50213 366 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 COX20Q5RI15 118 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 C16orf46Q6P387 395 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 RAB44Q7Z6P3 723 aaPredicted RBP9.82□□□□□ -0.84
VPS50-211ENST00000474412 COL26A1Q96A83 441 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 IFT43Q96FT9 208 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 TESK2Q96S53 571 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 RRAGCQ9HB90 399 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 KLF15Q9UIH9 416 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 LRFN2Q9ULH4 789 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 BRD4O60885 1362 aaPredicted RBP9.82□□□□□ -0.84
VPS50-211ENST00000474412 NHSQ6T4R5 1651 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms