RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 GJA3Q9Y6H8 435 aa12.64□□□□□ -0.39
CASC3-204ENST00000474190 G3V3G9 751 aa12.63□□□□□ -0.39
CASC3-204ENST00000474190 MECOMQ03112 1051 aa12.63□□□□□ -0.39
CASC3-204ENST00000474190 DIXDC1Q155Q3 683 aa12.63□□□□□ -0.39
CASC3-204ENST00000474190 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
CASC3-204ENST00000474190 APOBEC3HQ6NTF7 200 aaKnown RBP12.63□□□□□ -0.39
CASC3-204ENST00000474190 RBM46Q8TBY0 533 aaKnown RBP12.63□□□□□ -0.39
CASC3-204ENST00000474190 TRPM4Q8TD43 1214 aa12.63□□□□□ -0.39
CASC3-204ENST00000474190 TBC1D22AQ8WUA7 517 aa12.63□□□□□ -0.39
CASC3-204ENST00000474190 DNAJC2Q99543 621 aaKnown RBP12.63□□□□□ -0.39
CASC3-204ENST00000474190 MRIQ9BWK5 157 aa12.63□□□□□ -0.39
CASC3-204ENST00000474190 SUGT1Q9Y2Z0 365 aa12.63□□□□□ -0.39
CASC3-204ENST00000474190 GAKO14976 1311 aa12.62□□□□□ -0.39
CASC3-204ENST00000474190 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
CASC3-204ENST00000474190 PSME4Q14997 1843 aa12.62□□□□□ -0.39
CASC3-204ENST00000474190 MICALL2Q8IY33 904 aa12.62□□□□□ -0.39
CASC3-204ENST00000474190 KBTBD3Q8NAB2 608 aa12.62□□□□□ -0.39
CASC3-204ENST00000474190 MTMR14Q8NCE2 650 aa12.62□□□□□ -0.39
CASC3-204ENST00000474190 FBXW7Q969H0 707 aa12.62□□□□□ -0.39
CASC3-204ENST00000474190 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
CASC3-204ENST00000474190 CNOT7Q9UIV1 285 aaKnown RBP12.62□□□□□ -0.39
CASC3-204ENST00000474190 MYO3BQ8WXR4 1341 aa12.62□□□□□ -0.39
CASC3-204ENST00000474190 CCDC88AQ3V6T2 1871 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 F8W031 263 aaPredicted RBP12.61□□□□□ -0.39
CASC3-204ENST00000474190 ERC2O15083 957 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 FRAT2O75474 233 aaPredicted RBP12.61□□□□□ -0.39
CASC3-204ENST00000474190 USP17L8P0C7I0 530 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 POTEIP0CG38 1075 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 POTEJP0CG39 1038 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 PDE6AP16499 860 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 SDSP20132 328 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 SAMD7Q7Z3H4 446 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 GPATCH3Q96I76 525 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 IL25Q9H293 177 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 ABCF2Q9UG63 623 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 TTF2Q9UNY4 1162 aaKnown RBP12.61□□□□□ -0.39
CASC3-204ENST00000474190 DAGLAQ9Y4D2 1042 aa12.61□□□□□ -0.39
CASC3-204ENST00000474190 RFX7Q2KHR2 1363 aa12.6□□□□□ -0.39
CASC3-204ENST00000474190 LDHBP07195 334 aaKnown RBP12.6□□□□□ -0.39
CASC3-204ENST00000474190 ADD2P35612 726 aa12.6□□□□□ -0.39
CASC3-204ENST00000474190 CRKP46108 304 aa12.6□□□□□ -0.39
CASC3-204ENST00000474190 RGS3P49796 1198 aa12.6□□□□□ -0.39
CASC3-204ENST00000474190 RHBDL3P58872 404 aa12.6□□□□□ -0.39
CASC3-204ENST00000474190 HDLBPQ00341 1268 aaKnown RBP12.6□□□□□ -0.39
CASC3-204ENST00000474190 PRMT6Q96LA8 375 aaPredicted RBP12.6□□□□□ -0.39
CASC3-204ENST00000474190 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
CASC3-204ENST00000474190 SERPINA10Q9UK55 444 aa12.6□□□□□ -0.39
CASC3-204ENST00000474190 GPR75-ASB3A0A0A6YYF3 556 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 WNT10BO00744 389 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 FOXP2O15409 715 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 SLC34A2O95436 690 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 NBPF9Q3BBW0 867 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 CFAP100Q494V2 611 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 BMP2KLQ5H9B9 411 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 DPY19L2Q6NUT2 758 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 HHIPL2Q6UWX4 724 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 ERICH6Q7L0X2 663 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 OSBP2Q969R2 916 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 EVI5LQ96CN4 794 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 ZDHHC15Q96MV8 337 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 RIOK1Q9BRS2 568 aaKnown RBP12.59□□□□□ -0.39
CASC3-204ENST00000474190 RRAGCQ9HB90 399 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 MYOZ2Q9NPC6 264 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 PGAP2Q9UHJ9 254 aa12.59□□□□□ -0.39
CASC3-204ENST00000474190 IGSF3O75054 1194 aa12.58□□□□□ -0.4
CASC3-204ENST00000474190 IDH1O75874 414 aaKnown RBP12.58□□□□□ -0.4
CASC3-204ENST00000474190 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
CASC3-204ENST00000474190 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
CASC3-204ENST00000474190 FSTL1Q12841 308 aa12.58□□□□□ -0.4
CASC3-204ENST00000474190 TTF1Q15361 905 aaPredicted RBP12.58□□□□□ -0.4
CASC3-204ENST00000474190 UBE3CQ15386 1083 aa12.58□□□□□ -0.4
CASC3-204ENST00000474190 TBC1D10BQ4KMP7 808 aaPredicted RBP12.58□□□□□ -0.4
CASC3-204ENST00000474190 ZGPATQ8N5A5 531 aaKnown RBP12.58□□□□□ -0.4
CASC3-204ENST00000474190 MAGEB6Q8N7X4 407 aa12.58□□□□□ -0.4
CASC3-204ENST00000474190 SEC62Q99442 399 aaKnown RBP12.58□□□□□ -0.4
CASC3-204ENST00000474190 PUS7LQ9H0K6 701 aaKnown RBP12.58□□□□□ -0.4
CASC3-204ENST00000474190 LRP2BPQ9P2M1 347 aa12.58□□□□□ -0.4
CASC3-204ENST00000474190 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
CASC3-204ENST00000474190 MROH7-TTC4A0A0A0MT08 1334 aa12.58□□□□□ -0.4
CASC3-204ENST00000474190 ZNF532Q9HCE3 1301 aa12.58□□□□□ -0.4
CASC3-204ENST00000474190 ADAMTSL1Q8N6G6 1762 aa12.57□□□□□ -0.4
CASC3-204ENST00000474190 EPHX2P34913 555 aa12.57□□□□□ -0.4
CASC3-204ENST00000474190 PPP4CP60510 307 aa12.57□□□□□ -0.4
CASC3-204ENST00000474190 DYNLL1P63167 89 aaKnown RBP12.57□□□□□ -0.4
CASC3-204ENST00000474190 ZMYM1Q5SVZ6 1142 aa12.57□□□□□ -0.4
CASC3-204ENST00000474190 SLC9C2Q5TAH2 1124 aa12.57□□□□□ -0.4
CASC3-204ENST00000474190 SPTY2D1Q68D10 685 aaPredicted RBP12.57□□□□□ -0.4
CASC3-204ENST00000474190 FAM227BQ96M60 508 aa12.57□□□□□ -0.4
CASC3-204ENST00000474190 ADARB2Q9NS39 739 aaKnown RBP12.57□□□□□ -0.4
CASC3-204ENST00000474190 RAI14Q9P0K7 980 aa12.57□□□□□ -0.4
CASC3-204ENST00000474190 MKRN1Q9UHC7 482 aaKnown RBP12.57□□□□□ -0.4
CASC3-204ENST00000474190 HACL1Q9UJ83 578 aa12.57□□□□□ -0.4
CASC3-204ENST00000474190 DOCK2Q92608 1830 aa12.56□□□□□ -0.4
CASC3-204ENST00000474190 A0A0D9SFI3 127 aa12.56□□□□□ -0.4
CASC3-204ENST00000474190 M0R2C6 588 aa12.56□□□□□ -0.4
CASC3-204ENST00000474190 RNF113AO15541 343 aaKnown RBP12.56□□□□□ -0.4
CASC3-204ENST00000474190 WDHD1O75717 1129 aaPredicted RBP12.56□□□□□ -0.4
CASC3-204ENST00000474190 CYP7A1P22680 504 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms