RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 IQSEC3Q9UPP2 1182 aaPredicted RBP25.36■■□□□ 1.65
SNX13-206ENST00000474067 CRKP46108 304 aa25.35■■□□□ 1.65
SNX13-206ENST00000474067 G3BP1Q13283 466 aaKnown RBP eCLIP25.35■■□□□ 1.65
SNX13-206ENST00000474067 ITPRIPQ8IWB1 547 aa25.35■■□□□ 1.65
SNX13-206ENST00000474067 PRMT6Q96LA8 375 aaPredicted RBP25.35■■□□□ 1.65
SNX13-206ENST00000474067 CHMP4BQ9H444 224 aaKnown RBP25.35■■□□□ 1.65
SNX13-206ENST00000474067 MYH13Q9UKX3 1938 aa25.34■■□□□ 1.65
SNX13-206ENST00000474067 MVPQ14764 893 aaKnown RBP25.34■■□□□ 1.65
SNX13-206ENST00000474067 SPDYE2Q495Y8 402 aa25.33■■□□□ 1.65
SNX13-206ENST00000474067 HOOK2Q96ED9 719 aa25.33■■□□□ 1.65
SNX13-206ENST00000474067 SAGE1Q9NXZ1 904 aa25.33■■□□□ 1.65
SNX13-206ENST00000474067 PA2G4Q9UQ80 394 aaKnown RBP25.33■■□□□ 1.65
SNX13-206ENST00000474067 CLRN2A0PK11 232 aa25.32■■□□□ 1.64
SNX13-206ENST00000474067 HSPA8P11142 646 aaKnown RBP25.32■■□□□ 1.64
SNX13-206ENST00000474067 LBX1P52954 281 aa25.32■■□□□ 1.64
SNX13-206ENST00000474067 FAM155AB1AL88 458 aaPredicted RBP25.31■■□□□ 1.64
SNX13-206ENST00000474067 HHIPL2Q6UWX4 724 aa25.31■■□□□ 1.64
SNX13-206ENST00000474067 ZDHHC15Q96MV8 337 aa25.31■■□□□ 1.64
SNX13-206ENST00000474067 ZNF70Q9UC06 446 aaPredicted RBP25.31■■□□□ 1.64
SNX13-206ENST00000474067 IREB2P48200 963 aaKnown RBP25.3■■□□□ 1.64
SNX13-206ENST00000474067 GORABQ5T7V8 394 aa25.3■■□□□ 1.64
SNX13-206ENST00000474067 PRAMEF18Q5VWM3 479 aa25.3■■□□□ 1.64
SNX13-206ENST00000474067 SLF2Q8IX21 1173 aa25.3■■□□□ 1.64
SNX13-206ENST00000474067 ANGEL1Q9UNK9 670 aaKnown RBP25.3■■□□□ 1.64
SNX13-206ENST00000474067 SCAF8Q9UPN6 1271 aaKnown RBP25.3■■□□□ 1.64
SNX13-206ENST00000474067 PDS5AQ29RF7 1337 aaKnown RBP25.3■■□□□ 1.64
SNX13-206ENST00000474067 SALL1Q9NSC2 1324 aa25.3■■□□□ 1.64
SNX13-206ENST00000474067 KIF23Q02241 960 aaPredicted RBP25.29■■□□□ 1.64
SNX13-206ENST00000474067 RASA3Q14644 834 aa25.29■■□□□ 1.64
SNX13-206ENST00000474067 MAP3K11Q16584 847 aa25.29■■□□□ 1.64
SNX13-206ENST00000474067 RASAL3Q86YV0 1011 aa25.29■■□□□ 1.64
SNX13-206ENST00000474067 TDRD3Q9H7E2 651 aaKnown RBP25.29■■□□□ 1.64
SNX13-206ENST00000474067 A0A1B0GUL7 405 aa25.28■■□□□ 1.64
SNX13-206ENST00000474067 UBE2Q2LH0YL09 131 aa25.28■■□□□ 1.64
SNX13-206ENST00000474067 LDHBP07195 334 aaKnown RBP25.28■■□□□ 1.64
SNX13-206ENST00000474067 SREBF2Q12772 1141 aa25.28■■□□□ 1.64
SNX13-206ENST00000474067 OS9Q13438 667 aaPredicted RBP25.28■■□□□ 1.64
SNX13-206ENST00000474067 FKBP1CQ5VVH2 108 aa25.28■■□□□ 1.64
SNX13-206ENST00000474067 SPTY2D1Q68D10 685 aaPredicted RBP25.28■■□□□ 1.64
SNX13-206ENST00000474067 CCDC102BQ68D86 513 aa25.28■■□□□ 1.64
SNX13-206ENST00000474067 TFCP2Q12800 502 aa25.27■■□□□ 1.64
SNX13-206ENST00000474067 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.27■■□□□ 1.64
SNX13-206ENST00000474067 TNNQ9UQP3 1299 aa25.27■■□□□ 1.64
SNX13-206ENST00000474067 ATP8B2P98198 1209 aa25.26■■□□□ 1.63
SNX13-206ENST00000474067 NEUROD6Q96NK8 337 aa25.26■■□□□ 1.63
SNX13-206ENST00000474067 PNMA6EA0A0J9YXQ4 647 aa25.25■■□□□ 1.63
SNX13-206ENST00000474067 ZBTB7BO15156 539 aaPredicted RBP25.25■■□□□ 1.63
SNX13-206ENST00000474067 LDLRAD1Q5T700 205 aa25.25■■□□□ 1.63
SNX13-206ENST00000474067 FAM83AQ86UY5 434 aa25.25■■□□□ 1.63
SNX13-206ENST00000474067 SLC10A4Q96EP9 437 aa25.25■■□□□ 1.63
SNX13-206ENST00000474067 GPR108Q9NPR9 543 aa25.25■■□□□ 1.63
SNX13-206ENST00000474067 PHKA1P46020 1223 aa25.24■■□□□ 1.63
SNX13-206ENST00000474067 INHBEP58166 350 aa25.24■■□□□ 1.63
SNX13-206ENST00000474067 TIMM10P62072 90 aa25.24■■□□□ 1.63
SNX13-206ENST00000474067 PRKG1Q13976 671 aa25.24■■□□□ 1.63
SNX13-206ENST00000474067 ANKRD13AQ8IZ07 590 aa25.24■■□□□ 1.63
SNX13-206ENST00000474067 SSH3Q8TE77 659 aa25.24■■□□□ 1.63
SNX13-206ENST00000474067 XAGE2Q96GT9 111 aa25.24■■□□□ 1.63
SNX13-206ENST00000474067 PCDHAC2Q9Y5I4 1007 aa25.24■■□□□ 1.63
SNX13-206ENST00000474067 PCNTO95613 3336 aa25.23■■□□□ 1.63
SNX13-206ENST00000474067 UQCRFS1P1P0C7P4 283 aa25.23■■□□□ 1.63
SNX13-206ENST00000474067 ZBTB48P10074 688 aaPredicted RBP25.23■■□□□ 1.63
SNX13-206ENST00000474067 POLA2Q14181 598 aa25.23■■□□□ 1.63
SNX13-206ENST00000474067 MOB2Q70IA6 237 aa25.23■■□□□ 1.63
SNX13-206ENST00000474067 DZIP1Q86YF9 867 aaKnown RBP25.23■■□□□ 1.63
SNX13-206ENST00000474067 RCAN3Q9UKA8 241 aa25.23■■□□□ 1.63
SNX13-206ENST00000474067 DDX19BQ9UMR2 479 aa25.23■■□□□ 1.63
SNX13-206ENST00000474067 AKAP11Q9UKA4 1901 aa25.23■■□□□ 1.63
SNX13-206ENST00000474067 TCP10L2B9ZVM9 353 aa25.22■■□□□ 1.63
SNX13-206ENST00000474067 CSRNP1Q96S65 589 aa25.22■■□□□ 1.63
SNX13-206ENST00000474067 IGSF3O75054 1194 aa25.21■■□□□ 1.63
SNX13-206ENST00000474067 SURF6O75683 361 aaKnown RBP25.21■■□□□ 1.63
SNX13-206ENST00000474067 ALDH1A1P00352 501 aa25.21■■□□□ 1.63
SNX13-206ENST00000474067 HSP90AB4PQ58FF6 505 aa25.21■■□□□ 1.63
SNX13-206ENST00000474067 NBPF12Q5TAG4 269 aaPredicted RBP25.21■■□□□ 1.63
SNX13-206ENST00000474067 DCAF15Q66K64 600 aa25.21■■□□□ 1.63
SNX13-206ENST00000474067 ERC1Q8IUD2 1116 aa25.21■■□□□ 1.63
SNX13-206ENST00000474067 RPAP1Q9BWH6 1393 aaPredicted RBP25.2■■□□□ 1.63
SNX13-206ENST00000474067 MANSC4A6NHS7 340 aaPredicted RBP25.2■■□□□ 1.62
SNX13-206ENST00000474067 CCDC158Q5M9N0 1113 aa25.2■■□□□ 1.62
SNX13-206ENST00000474067 RLBP1P12271 317 aa25.19■■□□□ 1.62
SNX13-206ENST00000474067 PRDX5P30044 214 aa25.19■■□□□ 1.62
SNX13-206ENST00000474067 ADORA1P30542 326 aa25.19■■□□□ 1.62
SNX13-206ENST00000474067 RASGRF1Q13972 1273 aa25.19■■□□□ 1.62
SNX13-206ENST00000474067 GRIK5Q16478 980 aa25.19■■□□□ 1.62
SNX13-206ENST00000474067 APOBEC3HQ6NTF7 200 aaKnown RBP25.19■■□□□ 1.62
SNX13-206ENST00000474067 ABCF2Q9UG63 623 aa25.19■■□□□ 1.62
SNX13-206ENST00000474067 HMMRO75330 724 aa25.18■■□□□ 1.62
SNX13-206ENST00000474067 TM4SF4P48230 202 aa25.18■■□□□ 1.62
SNX13-206ENST00000474067 GSTO1P78417 241 aa25.18■■□□□ 1.62
SNX13-206ENST00000474067 SPRYD7Q5W111 196 aa25.18■■□□□ 1.62
SNX13-206ENST00000474067 OTUD7BQ6GQQ9 843 aa25.18■■□□□ 1.62
SNX13-206ENST00000474067 ERICH6Q7L0X2 663 aa25.18■■□□□ 1.62
SNX13-206ENST00000474067 ZIC5Q96T25 663 aa25.18■■□□□ 1.62
SNX13-206ENST00000474067 RNF186Q9NXI6 227 aa25.18■■□□□ 1.62
SNX13-206ENST00000474067 NOP58Q9Y2X3 529 aaKnown RBP25.18■■□□□ 1.62
SNX13-206ENST00000474067 CSADQ9Y600 493 aa25.18■■□□□ 1.62
SNX13-206ENST00000474067 TRPA1O75762 1119 aa25.17■■□□□ 1.62
SNX13-206ENST00000474067 LDHCP07864 332 aa25.17■■□□□ 1.62
SNX13-206ENST00000474067 DAGLAQ9Y4D2 1042 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms