RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SOCS7O14512 581 aa12.3□□□□□ -0.44
PRPF38A-202ENST00000474048 BAG3O95817 575 aa12.3□□□□□ -0.44
PRPF38A-202ENST00000474048 APPP05067 770 aa12.3□□□□□ -0.44
PRPF38A-202ENST00000474048 ZKSCAN1P17029 563 aaPredicted RBP12.3□□□□□ -0.44
PRPF38A-202ENST00000474048 GNAT2P19087 354 aa12.3□□□□□ -0.44
PRPF38A-202ENST00000474048 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
PRPF38A-202ENST00000474048 NACAP1Q9BZK3 213 aa12.3□□□□□ -0.44
PRPF38A-202ENST00000474048 ZNF277Q9NRM2 450 aaPredicted RBP12.3□□□□□ -0.44
PRPF38A-202ENST00000474048 SUGT1Q9Y2Z0 365 aa12.3□□□□□ -0.44
PRPF38A-202ENST00000474048 IRS2Q9Y4H2 1338 aa12.3□□□□□ -0.44
PRPF38A-202ENST00000474048 FER1L6Q2WGJ9 1857 aa12.29□□□□□ -0.44
PRPF38A-202ENST00000474048 MAGEB6P1A0A0J9YX57 407 aa12.29□□□□□ -0.44
PRPF38A-202ENST00000474048 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
PRPF38A-202ENST00000474048 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
PRPF38A-202ENST00000474048 SEC24BO95487 1268 aa12.29□□□□□ -0.44
PRPF38A-202ENST00000474048 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
PRPF38A-202ENST00000474048 TBC1D32Q96NH3 1257 aa12.29□□□□□ -0.44
PRPF38A-202ENST00000474048 CTNNA3Q9UI47 895 aa12.29□□□□□ -0.44
PRPF38A-202ENST00000474048 U3KPZ7 1027 aaPredicted RBP12.29□□□□□ -0.44
PRPF38A-202ENST00000474048 FAM205AQ6ZU69 1335 aa12.29□□□□□ -0.44
PRPF38A-202ENST00000474048 MYO3BQ8WXR4 1341 aa12.29□□□□□ -0.44
PRPF38A-202ENST00000474048 GPAA1O43292 621 aa12.28□□□□□ -0.44
PRPF38A-202ENST00000474048 PLCG2P16885 1265 aa12.28□□□□□ -0.44
PRPF38A-202ENST00000474048 PRDX5P30044 214 aa12.28□□□□□ -0.44
PRPF38A-202ENST00000474048 MECOMQ03112 1051 aa12.28□□□□□ -0.44
PRPF38A-202ENST00000474048 STRIP1Q5VSL9 837 aa12.28□□□□□ -0.44
PRPF38A-202ENST00000474048 ARHGAP27Q6ZUM4 889 aa12.28□□□□□ -0.44
PRPF38A-202ENST00000474048 AMOTL1Q8IY63 956 aa12.28□□□□□ -0.44
PRPF38A-202ENST00000474048 RBM19Q9Y4C8 960 aaKnown RBP12.28□□□□□ -0.44
PRPF38A-202ENST00000474048 M0R2C6 588 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 MBD4O95243 580 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 TDO2P48775 406 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 EIF6P56537 245 aaKnown RBP12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 CCDC129Q6ZRS4 1044 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 SEC62Q99442 399 aaKnown RBP12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 SYT17Q9BSW7 474 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 DSCC1Q9BVC3 393 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 USP26Q9BXU7 913 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 CRNKL1Q9BZJ0 848 aaKnown RBP12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 HDAC9Q9UKV0 1011 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 ZNRF3Q9ULT6 936 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 LTBP3Q9NS15 1303 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 MYH2Q9UKX2 1941 aa12.27□□□□□ -0.45
PRPF38A-202ENST00000474048 F8W031 263 aaPredicted RBP12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 RBM5P52756 815 aaKnown RBP eCLIP12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 FKBP1AP62942 108 aaKnown RBP12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 BECN1Q14457 450 aa12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 TNIP1Q15025 636 aa12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 IMMTQ16891 758 aaKnown RBP12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 ZNF589Q86UQ0 364 aaPredicted RBP12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 OGFOD1Q8N543 542 aa12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 OSBP2Q969R2 916 aa12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 NSUN4Q96CB9 384 aaKnown RBP12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 PUS7LQ9H0K6 701 aaKnown RBP12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 NAPBQ9H115 298 aa12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 TTF2Q9UNY4 1162 aaKnown RBP12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 RBM8AQ9Y5S9 174 aaKnown RBP12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 SLC4A4Q9Y6R1 1079 aa12.26□□□□□ -0.45
PRPF38A-202ENST00000474048 DCAF8L1A6NGE4 600 aa12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 USP5P45974 858 aa12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 ANAPC15P60006 121 aa12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 KRT32Q14532 448 aa12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 GPR162Q16538 588 aa12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 TEKT1Q969V4 418 aa12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 LSG1Q9H089 658 aaKnown RBP12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 ARMT1Q9H993 441 aa12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 AATFQ9NY61 560 aaKnown RBP eCLIP12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 MROH7-TTC4A0A0A0MT08 1334 aa12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 RPAP1Q9BWH6 1393 aaPredicted RBP12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 SNED1Q8TER0 1413 aa12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 PSME4Q14997 1843 aa12.25□□□□□ -0.45
PRPF38A-202ENST00000474048 TCRBV5S4A2TA0A5A2 114 aa12.24□□□□□ -0.45
PRPF38A-202ENST00000474048 ST18O60284 1047 aa12.24□□□□□ -0.45
PRPF38A-202ENST00000474048 HSPD1P10809 573 aaKnown RBP12.24□□□□□ -0.45
PRPF38A-202ENST00000474048 PSMA5P28066 241 aa12.24□□□□□ -0.45
PRPF38A-202ENST00000474048 RASSF7Q02833 373 aa12.24□□□□□ -0.45
PRPF38A-202ENST00000474048 CIAPIN1Q6FI81 312 aa12.24□□□□□ -0.45
PRPF38A-202ENST00000474048 PATL2C9JE40 543 aaKnown RBP12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 NFKBIEO00221 500 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 ZNF213O14771 459 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 RAD17O75943 681 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 SLC3A2P08195 630 aaKnown RBP12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 LMNB1P20700 586 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 HSPA4P34932 840 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 BTDP43251 543 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 PTH1RQ03431 593 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 TRDNQ13061 729 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 RABEP1Q15276 862 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 SLFNL1Q499Z3 407 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 KIAA0825Q8IV33 1275 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 HSCBQ8IWL3 235 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 LCORLQ8N3X6 602 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 IL27Q8NEV9 243 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 MAP4K1Q92918 833 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 IL25Q9H293 177 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 TMOD2Q9NZR1 351 aa12.23□□□□□ -0.45
PRPF38A-202ENST00000474048 CHGBP05060 677 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms