RNA–Protein interactions for RNA: ENST00000473943.1

PHF20-209, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-209ENST00000473943 HDLBPQ00341 1268 aaKnown RBP17.34■□□□□ 0.37
PHF20-209ENST00000473943 LPIN2Q92539 896 aa17.34■□□□□ 0.37
PHF20-209ENST00000473943 KIF16BQ96L93 1317 aa17.34■□□□□ 0.37
PHF20-209ENST00000473943 INHBEP58166 350 aa17.33■□□□□ 0.36
PHF20-209ENST00000473943 GRIK5Q16478 980 aa17.33■□□□□ 0.36
PHF20-209ENST00000473943 TEKT1Q969V4 418 aa17.33■□□□□ 0.36
PHF20-209ENST00000473943 SIL1Q9H173 461 aa17.33■□□□□ 0.36
PHF20-209ENST00000473943 CEP126Q9P2H0 1117 aa17.33■□□□□ 0.36
PHF20-209ENST00000473943 FBXO3Q9UK99 471 aa17.33■□□□□ 0.36
PHF20-209ENST00000473943 MANSC4A6NHS7 340 aaPredicted RBP17.32■□□□□ 0.36
PHF20-209ENST00000473943 TCP10L2B9ZVM9 353 aa17.32■□□□□ 0.36
PHF20-209ENST00000473943 USP2O75604 605 aaPredicted RBP17.32■□□□□ 0.36
PHF20-209ENST00000473943 ATG9AQ7Z3C6 839 aa17.32■□□□□ 0.36
PHF20-209ENST00000473943 CTU1Q7Z7A3 348 aaKnown RBP17.32■□□□□ 0.36
PHF20-209ENST00000473943 ARHGAP45Q92619 1136 aa17.32■□□□□ 0.36
PHF20-209ENST00000473943 CLMNQ96JQ2 1002 aa17.32■□□□□ 0.36
PHF20-209ENST00000473943 SUGT1Q9Y2Z0 365 aa17.32■□□□□ 0.36
PHF20-209ENST00000473943 LRRFIP2Q9Y608 721 aaKnown RBP17.32■□□□□ 0.36
PHF20-209ENST00000473943 MAST3O60307 1309 aa17.31■□□□□ 0.36
PHF20-209ENST00000473943 CIAO1O76071 339 aa17.31■□□□□ 0.36
PHF20-209ENST00000473943 ALDH1A1P00352 501 aa17.31■□□□□ 0.36
PHF20-209ENST00000473943 ZBTB48P10074 688 aaPredicted RBP17.31■□□□□ 0.36
PHF20-209ENST00000473943 ANKRD13AQ8IZ07 590 aa17.31■□□□□ 0.36
PHF20-209ENST00000473943 WDR66Q8TBY9 1149 aa17.31■□□□□ 0.36
PHF20-209ENST00000473943 WNK4Q96J92 1243 aa17.31■□□□□ 0.36
PHF20-209ENST00000473943 MRIQ9BWK5 157 aa17.31■□□□□ 0.36
PHF20-209ENST00000473943 TMOD2Q9NZR1 351 aa17.31■□□□□ 0.36
PHF20-209ENST00000473943 IPO8O15397 1037 aaKnown RBP17.3■□□□□ 0.36
PHF20-209ENST00000473943 ATP2B3Q16720 1220 aa17.3■□□□□ 0.36
PHF20-209ENST00000473943 ZNF296Q8WUU4 475 aaPredicted RBP17.3■□□□□ 0.36
PHF20-209ENST00000473943 MEIS3Q99687 375 aa17.3■□□□□ 0.36
PHF20-209ENST00000473943 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
PHF20-209ENST00000473943 SSC5DA1L4H1 1573 aa17.3■□□□□ 0.36
PHF20-209ENST00000473943 GPR25O00155 361 aa17.29■□□□□ 0.36
PHF20-209ENST00000473943 GNAI3P08754 354 aa17.29■□□□□ 0.36
PHF20-209ENST00000473943 IL15P40933 162 aaPredicted RBP17.29■□□□□ 0.36
PHF20-209ENST00000473943 NOM1Q5C9Z4 860 aaKnown RBP17.29■□□□□ 0.36
PHF20-209ENST00000473943 INTS3Q68E01 1043 aaKnown RBP17.29■□□□□ 0.36
PHF20-209ENST00000473943 ZDHHC15Q96MV8 337 aa17.29■□□□□ 0.36
PHF20-209ENST00000473943 TMEM39BQ9GZU3 492 aa17.29■□□□□ 0.36
PHF20-209ENST00000473943 ECM29Q5VYK3 1845 aa17.28■□□□□ 0.36
PHF20-209ENST00000473943 MLLT1Q03111 559 aaPredicted RBP17.28■□□□□ 0.36
PHF20-209ENST00000473943 HHIPL2Q6UWX4 724 aa17.28■□□□□ 0.36
PHF20-209ENST00000473943 IFNL1Q8IU54 200 aa17.28■□□□□ 0.36
PHF20-209ENST00000473943 TEPSINQ96N21 525 aa17.28■□□□□ 0.36
PHF20-209ENST00000473943 RGS19P49795 217 aa17.27■□□□□ 0.36
PHF20-209ENST00000473943 CACNB3P54284 484 aa17.27■□□□□ 0.36
PHF20-209ENST00000473943 PKN2Q16513 984 aaKnown RBP17.27■□□□□ 0.36
PHF20-209ENST00000473943 OTUD7BQ6GQQ9 843 aa17.27■□□□□ 0.36
PHF20-209ENST00000473943 APOBEC3HQ6NTF7 200 aaKnown RBP17.27■□□□□ 0.36
PHF20-209ENST00000473943 FRAT1Q92837 279 aaPredicted RBP17.27■□□□□ 0.36
PHF20-209ENST00000473943 CFHR5Q9BXR6 569 aa17.27■□□□□ 0.36
PHF20-209ENST00000473943 COPRSQ9NQ92 184 aa17.27■□□□□ 0.36
PHF20-209ENST00000473943 PA2G4Q9UQ80 394 aaKnown RBP17.27■□□□□ 0.36
PHF20-209ENST00000473943 FKTNO75072 461 aa17.26■□□□□ 0.35
PHF20-209ENST00000473943 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
PHF20-209ENST00000473943 FKBP1CQ5VVH2 108 aa17.26■□□□□ 0.35
PHF20-209ENST00000473943 CDAN1Q8IWY9 1227 aa17.26■□□□□ 0.35
PHF20-209ENST00000473943 HOOK2Q96ED9 719 aa17.26■□□□□ 0.35
PHF20-209ENST00000473943 ELP3Q9H9T3 547 aa17.26■□□□□ 0.35
PHF20-209ENST00000473943 SRGAP3O43295 1099 aa17.25■□□□□ 0.35
PHF20-209ENST00000473943 ATF7IPQ6VMQ6 1270 aa17.25■□□□□ 0.35
PHF20-209ENST00000473943 FAM83AQ86UY5 434 aa17.25■□□□□ 0.35
PHF20-209ENST00000473943 OPTNQ96CV9 577 aa17.25■□□□□ 0.35
PHF20-209ENST00000473943 R3HDMLQ9H3Y0 253 aa17.25■□□□□ 0.35
PHF20-209ENST00000473943 DENND2AQ9ULE3 1009 aa17.25■□□□□ 0.35
PHF20-209ENST00000473943 CSADQ9Y600 493 aa17.25■□□□□ 0.35
PHF20-209ENST00000473943 SEMA3EO15041 775 aa17.24■□□□□ 0.35
PHF20-209ENST00000473943 BCAR3O75815 825 aa17.24■□□□□ 0.35
PHF20-209ENST00000473943 LDHBP07195 334 aaKnown RBP17.24■□□□□ 0.35
PHF20-209ENST00000473943 TRIM27P14373 513 aa17.24■□□□□ 0.35
PHF20-209ENST00000473943 GJA5P36382 358 aa17.24■□□□□ 0.35
PHF20-209ENST00000473943 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.24■□□□□ 0.35
PHF20-209ENST00000473943 ARAP2Q8WZ64 1704 aa17.24■□□□□ 0.35
PHF20-209ENST00000473943 IGF2BP3O00425 579 aaKnown RBP eCLIP17.23■□□□□ 0.35
PHF20-209ENST00000473943 GNAI2P04899 355 aa17.23■□□□□ 0.35
PHF20-209ENST00000473943 PHKA1P46020 1223 aa17.23■□□□□ 0.35
PHF20-209ENST00000473943 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.23■□□□□ 0.35
PHF20-209ENST00000473943 HPS5Q9UPZ3 1129 aa17.23■□□□□ 0.35
PHF20-209ENST00000473943 AKAP2Q9Y2D5 859 aa17.23■□□□□ 0.35
PHF20-209ENST00000473943 TESPA1A2RU30 521 aaPredicted RBP17.22■□□□□ 0.35
PHF20-209ENST00000473943 TIMM10P62072 90 aa17.22■□□□□ 0.35
PHF20-209ENST00000473943 HNRNPUQ00839 825 aaKnown RBP eCLIP17.22■□□□□ 0.35
PHF20-209ENST00000473943 VGLL4Q14135 290 aa17.22■□□□□ 0.35
PHF20-209ENST00000473943 DCAF15Q66K64 600 aa17.22■□□□□ 0.35
PHF20-209ENST00000473943 CCDC102BQ68D86 513 aa17.22■□□□□ 0.35
PHF20-209ENST00000473943 ZGPATQ8N5A5 531 aaKnown RBP17.22■□□□□ 0.35
PHF20-209ENST00000473943 CLUAP1Q96AJ1 413 aa17.22■□□□□ 0.35
PHF20-209ENST00000473943 PRDX5P30044 214 aa17.21■□□□□ 0.35
PHF20-209ENST00000473943 ADORA1P30542 326 aa17.21■□□□□ 0.35
PHF20-209ENST00000473943 MTX1Q13505 466 aa17.21■□□□□ 0.35
PHF20-209ENST00000473943 DIXDC1Q155Q3 683 aa17.21■□□□□ 0.35
PHF20-209ENST00000473943 DIEXFQ68CQ4 756 aaKnown RBP17.21■□□□□ 0.35
PHF20-209ENST00000473943 CDC42EP5Q6NZY7 148 aa17.21■□□□□ 0.35
PHF20-209ENST00000473943 MIER1Q8N108 512 aa17.21■□□□□ 0.35
PHF20-209ENST00000473943 DAGLAQ9Y4D2 1042 aa17.21■□□□□ 0.35
PHF20-209ENST00000473943 SALL1Q9NSC2 1324 aa17.21■□□□□ 0.34
PHF20-209ENST00000473943 A0A1B0GUL7 405 aa17.2■□□□□ 0.34
PHF20-209ENST00000473943 GTF2A2P52657 109 aa17.2■□□□□ 0.34
PHF20-209ENST00000473943 SOX10P56693 466 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms