RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 SLC5A1P13866 664 aa14.93□□□□□ -0.02
SMPD4-217ENST00000473720 CACNB3P54284 484 aa14.93□□□□□ -0.02
SMPD4-217ENST00000473720 SPDYE2Q495Y8 402 aa14.93□□□□□ -0.02
SMPD4-217ENST00000473720 CTU1Q7Z7A3 348 aaKnown RBP14.93□□□□□ -0.02
SMPD4-217ENST00000473720 TBC1D22AQ8WUA7 517 aa14.93□□□□□ -0.02
SMPD4-217ENST00000473720 ZNF296Q8WUU4 475 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-217ENST00000473720 WNK4Q96J92 1243 aa14.93□□□□□ -0.02
SMPD4-217ENST00000473720 TMEM39BQ9GZU3 492 aa14.93□□□□□ -0.02
SMPD4-217ENST00000473720 LRRFIP2Q9Y608 721 aaKnown RBP14.93□□□□□ -0.02
SMPD4-217ENST00000473720 USP2O75604 605 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-217ENST00000473720 RFX5P48382 616 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-217ENST00000473720 MLLT1Q03111 559 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-217ENST00000473720 CDAN1Q8IWY9 1227 aa14.92□□□□□ -0.02
SMPD4-217ENST00000473720 TEKT1Q969V4 418 aa14.92□□□□□ -0.02
SMPD4-217ENST00000473720 API5Q9BZZ5 524 aaKnown RBP14.92□□□□□ -0.02
SMPD4-217ENST00000473720 GPR25O00155 361 aa14.91□□□□□ -0.02
SMPD4-217ENST00000473720 FGFR2P21802 821 aa14.91□□□□□ -0.02
SMPD4-217ENST00000473720 TNNI2P48788 182 aa14.91□□□□□ -0.02
SMPD4-217ENST00000473720 SOX10P56693 466 aa14.91□□□□□ -0.02
SMPD4-217ENST00000473720 MAP3K11Q16584 847 aa14.91□□□□□ -0.02
SMPD4-217ENST00000473720 R3HDMLQ9H3Y0 253 aa14.91□□□□□ -0.02
SMPD4-217ENST00000473720 ELP3Q9H9T3 547 aa14.91□□□□□ -0.02
SMPD4-217ENST00000473720 PA2G4Q9UQ80 394 aaKnown RBP14.91□□□□□ -0.02
SMPD4-217ENST00000473720 DOCK2Q92608 1830 aa14.9□□□□□ -0.02
SMPD4-217ENST00000473720 MANSC4A6NHS7 340 aaPredicted RBP14.9□□□□□ -0.02
SMPD4-217ENST00000473720 CT47B1P0C2W7 299 aaPredicted RBP14.9□□□□□ -0.02
SMPD4-217ENST00000473720 RARSP54136 660 aaKnown RBP14.9□□□□□ -0.02
SMPD4-217ENST00000473720 ATG9AQ7Z3C6 839 aa14.9□□□□□ -0.02
SMPD4-217ENST00000473720 IFNL1Q8IU54 200 aa14.9□□□□□ -0.02
SMPD4-217ENST00000473720 ANKRD13AQ8IZ07 590 aa14.9□□□□□ -0.02
SMPD4-217ENST00000473720 LPIN2Q92539 896 aa14.9□□□□□ -0.02
SMPD4-217ENST00000473720 MEIS3Q99687 375 aa14.9□□□□□ -0.02
SMPD4-217ENST00000473720 TMOD2Q9NZR1 351 aa14.9□□□□□ -0.02
SMPD4-217ENST00000473720 CEP126Q9P2H0 1117 aa14.9□□□□□ -0.02
SMPD4-217ENST00000473720 ZBTB48P10074 688 aaPredicted RBP14.89□□□□□ -0.03
SMPD4-217ENST00000473720 GJA5P36382 358 aa14.89□□□□□ -0.03
SMPD4-217ENST00000473720 ATP2B3Q16720 1220 aa14.89□□□□□ -0.03
SMPD4-217ENST00000473720 FRAT1Q92837 279 aaPredicted RBP14.89□□□□□ -0.03
SMPD4-217ENST00000473720 MAST3O60307 1309 aa14.89□□□□□ -0.03
SMPD4-217ENST00000473720 MYO5AQ9Y4I1 1855 aaKnown RBP14.89□□□□□ -0.03
SMPD4-217ENST00000473720 FKTNO75072 461 aa14.88□□□□□ -0.03
SMPD4-217ENST00000473720 OPTNQ96CV9 577 aa14.88□□□□□ -0.03
SMPD4-217ENST00000473720 TEPSINQ96N21 525 aa14.88□□□□□ -0.03
SMPD4-217ENST00000473720 KIF16BQ96L93 1317 aa14.88□□□□□ -0.03
SMPD4-217ENST00000473720 ZSWIM8A7E2V4 1837 aa14.87□□□□□ -0.03
SMPD4-217ENST00000473720 IGF2BP3O00425 579 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMPD4-217ENST00000473720 ALDH1A1P00352 501 aa14.87□□□□□ -0.03
SMPD4-217ENST00000473720 INHBEP58166 350 aa14.87□□□□□ -0.03
SMPD4-217ENST00000473720 HDLBPQ00341 1268 aaKnown RBP14.87□□□□□ -0.03
SMPD4-217ENST00000473720 WDR66Q8TBY9 1149 aa14.87□□□□□ -0.03
SMPD4-217ENST00000473720 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
SMPD4-217ENST00000473720 ZDHHC15Q96MV8 337 aa14.87□□□□□ -0.03
SMPD4-217ENST00000473720 HPS5Q9UPZ3 1129 aa14.87□□□□□ -0.03
SMPD4-217ENST00000473720 HDAC5Q9UQL6 1122 aa14.87□□□□□ -0.03
SMPD4-217ENST00000473720 TNNQ9UQP3 1299 aa14.87□□□□□ -0.03
SMPD4-217ENST00000473720 CIAO1O76071 339 aa14.86□□□□□ -0.03
SMPD4-217ENST00000473720 RGS19P49795 217 aa14.86□□□□□ -0.03
SMPD4-217ENST00000473720 VGLL4Q14135 290 aa14.86□□□□□ -0.03
SMPD4-217ENST00000473720 CLUAP1Q96AJ1 413 aa14.86□□□□□ -0.03
SMPD4-217ENST00000473720 GNL3LQ9NVN8 582 aaKnown RBP14.86□□□□□ -0.03
SMPD4-217ENST00000473720 CSADQ9Y600 493 aa14.86□□□□□ -0.03
SMPD4-217ENST00000473720 BCAR3O75815 825 aa14.85□□□□□ -0.03
SMPD4-217ENST00000473720 PRDX5P30044 214 aa14.85□□□□□ -0.03
SMPD4-217ENST00000473720 ADORA1P30542 326 aa14.85□□□□□ -0.03
SMPD4-217ENST00000473720 IL15P40933 162 aaPredicted RBP14.85□□□□□ -0.03
SMPD4-217ENST00000473720 PHKA1P46020 1223 aa14.85□□□□□ -0.03
SMPD4-217ENST00000473720 MAP3K9P80192 1104 aa14.85□□□□□ -0.03
SMPD4-217ENST00000473720 TCP10Q12799 353 aa14.85□□□□□ -0.03
SMPD4-217ENST00000473720 DIXDC1Q155Q3 683 aa14.85□□□□□ -0.03
SMPD4-217ENST00000473720 PKN2Q16513 984 aaKnown RBP14.85□□□□□ -0.03
SMPD4-217ENST00000473720 OTUD7BQ6GQQ9 843 aa14.85□□□□□ -0.03
SMPD4-217ENST00000473720 APOBEC3HQ6NTF7 200 aaKnown RBP14.85□□□□□ -0.03
SMPD4-217ENST00000473720 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.85□□□□□ -0.03
SMPD4-217ENST00000473720 OTUD5Q96G74 571 aa14.85□□□□□ -0.03
SMPD4-217ENST00000473720 SUGT1Q9Y2Z0 365 aa14.85□□□□□ -0.03
SMPD4-217ENST00000473720 UNCXA6NJT0 531 aa14.84□□□□□ -0.03
SMPD4-217ENST00000473720 SRGAP3O43295 1099 aa14.84□□□□□ -0.03
SMPD4-217ENST00000473720 LDHBP07195 334 aaKnown RBP14.84□□□□□ -0.03
SMPD4-217ENST00000473720 GNAI3P08754 354 aa14.84□□□□□ -0.03
SMPD4-217ENST00000473720 TIMM10P62072 90 aa14.84□□□□□ -0.03
SMPD4-217ENST00000473720 CRHR2Q13324 411 aa14.84□□□□□ -0.03
SMPD4-217ENST00000473720 INTS3Q68E01 1043 aaKnown RBP14.84□□□□□ -0.03
SMPD4-217ENST00000473720 HHIPL2Q6UWX4 724 aa14.84□□□□□ -0.03
SMPD4-217ENST00000473720 MIGA2Q7L4E1 593 aa14.84□□□□□ -0.03
SMPD4-217ENST00000473720 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.84□□□□□ -0.03
SMPD4-217ENST00000473720 WRNIP1Q96S55 665 aa14.84□□□□□ -0.03
SMPD4-217ENST00000473720 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
SMPD4-217ENST00000473720 TRIM17Q9Y577 477 aa14.84□□□□□ -0.03
SMPD4-217ENST00000473720 ATAD5Q96QE3 1844 aa14.84□□□□□ -0.03
SMPD4-217ENST00000473720 IPO8O15397 1037 aaKnown RBP14.83□□□□□ -0.04
SMPD4-217ENST00000473720 CD99L2Q8TCZ2 262 aa14.83□□□□□ -0.04
SMPD4-217ENST00000473720 ARHGAP45Q92619 1136 aa14.83□□□□□ -0.04
SMPD4-217ENST00000473720 ZKSCAN4Q969J2 545 aaPredicted RBP14.83□□□□□ -0.04
SMPD4-217ENST00000473720 PTPN18Q99952 460 aa14.83□□□□□ -0.04
SMPD4-217ENST00000473720 CFHR5Q9BXR6 569 aa14.83□□□□□ -0.04
SMPD4-217ENST00000473720 DENND2AQ9ULE3 1009 aa14.83□□□□□ -0.04
SMPD4-217ENST00000473720 DAGLAQ9Y4D2 1042 aa14.83□□□□□ -0.04
SMPD4-217ENST00000473720 MGAMO43451 1857 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 CDK5RAP2Q96SN8 1893 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 PTPRFP10586 1907 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms